ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY224547.1| Oryza sativa (japonica cultivar-group) isolate 24... 295 6e-77
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 295 6e-77
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 295 6e-77
4emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa... 295 6e-77
5emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 295 6e-77
6emb|AJ606023.1| Triticum aestivum partial mRNA for putative cent... 82 2e-12
7ref|XM_468999.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 72 2e-09
9gb|AY224555.1| Oryza sativa (japonica cultivar-group) isolate 26... 72 2e-09
10gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 72 2e-09
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
12gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete s... 50 0.006
13gb|BC075288.1| Xenopus tropicalis cDNA clone IMAGE:6999991 46 0.097
14emb|CR926284.2| Xenopus tropicalis finished cDNA, clone TEgg003l22 46 0.097
15emb|AL138694.18| Human DNA sequence from clone RP11-330C15 on ch... 44 0.38
16emb|AL772235.4| Mouse DNA sequence from clone RP23-155K12 on chr... 44 0.38
17gb|AC105169.9| Mus musculus chromosome 10, clone RP24-124K4, com... 42 1.5
18emb|AL589684.7| Human DNA sequence from clone RP11-437J19 on chr... 42 1.5
19gb|AC154263.2| Mus musculus BAC clone RP24-308C1 from chromosome... 42 1.5
20gb|AC010745.4| Homo sapiens BAC clone RP11-549D18 from 2, comple... 42 1.5
21gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromo... 42 1.5
22emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 ma... 42 1.5
23emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chro... 42 1.5
24gb|AC141583.3| Rattus norvegicus 9 BAC CH230-486H15 (Children's ... 40 6.0
25ref|XM_416174.1| PREDICTED: Gallus gallus similar to down-regula... 40 6.0
26gb|AC107179.5| Rattus norvegicus 9 BAC CH230-155P21 (Children's ... 40 6.0
27ref|XM_448578.1| Candida glabrata CBS138, CAGL0K08206g partial mRNA 40 6.0
28gb|AC123839.2| Mus musculus BAC clone RP23-392K4 from 17, comple... 40 6.0
29gb|AC142341.1| Pan troglodytes BAC clone RP43-43C1 from 7, compl... 40 6.0
30emb|AL603840.9| Human DNA sequence from clone RP11-365M18 on chr... 40 6.0
31emb|AL359697.23| Human DNA sequence from clone RP11-399C16 on ch... 40 6.0
32emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chro... 40 6.0
33emb|AL138772.8| Human DNA sequence from clone RP4-576A20 on chro... 40 6.0
34emb|CR380957.1| Candida glabrata strain CBS138 chromosome K comp... 40 6.0
35gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Canc... 40 6.0
36emb|AL672030.10| Mouse DNA sequence from clone RP23-199E12 on ch... 40 6.0
37gb|AC112251.5| Homo sapiens BAC clone RP11-734I18 from 4, comple... 40 6.0
38dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 6.0
39gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, com... 40 6.0
40gb|AC160144.6| Mus musculus 10 BAC RP24-130G2 (Roswell Park Canc... 40 6.0
41ref|XM_230936.3| PREDICTED: Rattus norvegicus similar to C20orf1... 40 6.0
42gb|AC012104.6|AC012104 Mus musculus chromosome , clone CT7-478J1... 40 6.0
43gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Can... 40 6.0
44dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.0
45dbj|AP001970.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.0
46dbj|AP005363.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.0
47emb|CR450830.9| Zebrafish DNA sequence from clone CH211-286F9 in... 40 6.0
48gb|AF072536.1|AF072536 Arabidopsis thaliana H-protein promoter b... 40 6.0
49emb|AL929381.9| Mouse DNA sequence from clone RP23-266K3 on chro... 40 6.0
50emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chr... 40 6.0
51emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus co... 40 6.0
52dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge... 40 6.0 
>gb|AY224547.1| Oryza sativa (japonica cultivar-group) isolate 24091 centromere
           protein-like protein mRNA, partial cds
          Length = 1537

 Score =  295 bits (149), Expect = 6e-77
 Identities = 350/417 (83%)
 Strand = Plus / Plus

                                                                       
Query: 22  caaagaactcacccactcagacaaggctcagttcagtgctttgcagaagcagatagccct 81
           ||||||||| | | |||||| |||| |||||||||||||| | ||||||||| ||  | |
Sbjct: 351 caaagaactgaactactcaggcaagactcagttcagtgctgtacagaagcagttaagctt 410

                                                                       
Query: 82  acttctagaagatggacgcaataaggagaaccagcttcaagaggaggagcacaagattgt 141
            || || ||||| || ||   || |||||||||||||||||| |||||||| ||||||||
Sbjct: 411 cctgctcgaagaaggccgtcgtagggagaaccagcttcaagatgaggagcataagattgt 470

                                                                       
Query: 142 cgaagctcagatcgagattttcatcttgcagaagtgtttaggtgacatggcagaagcaaa 201
            ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 471 tgaagctcagatggagattttcgtcttgcagaagtgcttaggtgacatggcagaggcaaa 530

                                                                       
Query: 202 ttctgatgtctcagggcaactgcagaagcagcaagaggcacacaaaggtcttgaggagaa 261
           ||||||||||||||||||||||||||||||| |||||  |  | ||   |  ||||||||
Sbjct: 531 ttctgatgtctcagggcaactgcagaagcagaaagagctatgcgaaatccaggaggagaa 590

                                                                       
Query: 262 actggcctatttgtcacaaaacaaccagaagcttactgaagggattggttctgtgatgga 321
           | |  ||| |||| || |||||||||||| | | || ||||| |||||||||||||||||
Sbjct: 591 attaacctttttgacagaaaacaaccagaggttaacggaaggaattggttctgtgatgga 650

                                                                       
Query: 322 agtgctgcagtttgatgagaaatatggatccttggatctgatgaaggttgacatagttgt 381
           ||  || || || ||||| ||||||||||| |||||||| |||||| ||||  || | ||
Sbjct: 651 agaactacatttggatgataaatatggatcattggatctaatgaagcttgatgtaatcgt 710

                                                                    
Query: 382 gcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagga 438
           ||||||||||||||||||||| |||||| ||||||| || ||||||||||| |||||
Sbjct: 711 gcagctcatcttgcatgagatcaagtgcttgctgaatactatttctgatgctcagga 767
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  295 bits (149), Expect = 6e-77
 Identities = 350/417 (83%)
 Strand = Plus / Minus

                                                                            
Query: 22       caaagaactcacccactcagacaaggctcagttcagtgctttgcagaagcagatagccct 81
                ||||||||| | | |||||| |||| |||||||||||||| | ||||||||| ||  | |
Sbjct: 25573560 caaagaactgaactactcaggcaagactcagttcagtgctgtacagaagcagttaagctt 25573501

                                                                            
Query: 82       acttctagaagatggacgcaataaggagaaccagcttcaagaggaggagcacaagattgt 141
                 || || ||||| || ||   || |||||||||||||||||| |||||||| ||||||||
Sbjct: 25573500 cctgctcgaagaaggccgtcgtagggagaaccagcttcaagatgaggagcataagattgt 25573441

                                                                            
Query: 142      cgaagctcagatcgagattttcatcttgcagaagtgtttaggtgacatggcagaagcaaa 201
                 ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 25573440 tgaagctcagatggagattttcgtcttgcagaagtgcttaggtgacatggcagaggcaaa 25573381

                                                                            
Query: 202      ttctgatgtctcagggcaactgcagaagcagcaagaggcacacaaaggtcttgaggagaa 261
                ||||||||||||||||||||||||||||||| |||||  |  | ||   |  ||||||||
Sbjct: 25573380 ttctgatgtctcagggcaactgcagaagcagaaagagctatgcgaaatccaggaggagaa 25573321

                                                                            
Query: 262      actggcctatttgtcacaaaacaaccagaagcttactgaagggattggttctgtgatgga 321
                | |  ||| |||| || |||||||||||| | | || ||||| |||||||||||||||||
Sbjct: 25573320 attaacctttttgacagaaaacaaccagaggttaacggaaggaattggttctgtgatgga 25573261

                                                                            
Query: 322      agtgctgcagtttgatgagaaatatggatccttggatctgatgaaggttgacatagttgt 381
                ||  || || || ||||| ||||||||||| |||||||| |||||| ||||  || | ||
Sbjct: 25573260 agaactacatttggatgataaatatggatcattggatctaatgaagcttgatgtaatcgt 25573201

                                                                         
Query: 382      gcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagga 438
                ||||||||||||||||||||| |||||| ||||||| || ||||||||||| |||||
Sbjct: 25573200 gcagctcatcttgcatgagatcaagtgcttgctgaatactatttctgatgctcagga 25573144
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  295 bits (149), Expect = 6e-77
 Identities = 350/417 (83%)
 Strand = Plus / Minus

                                                                            
Query: 22       caaagaactcacccactcagacaaggctcagttcagtgctttgcagaagcagatagccct 81
                ||||||||| | | |||||| |||| |||||||||||||| | ||||||||| ||  | |
Sbjct: 25501736 caaagaactgaactactcaggcaagactcagttcagtgctgtacagaagcagttaagctt 25501677

                                                                            
Query: 82       acttctagaagatggacgcaataaggagaaccagcttcaagaggaggagcacaagattgt 141
                 || || ||||| || ||   || |||||||||||||||||| |||||||| ||||||||
Sbjct: 25501676 cctgctcgaagaaggccgtcgtagggagaaccagcttcaagatgaggagcataagattgt 25501617

                                                                            
Query: 142      cgaagctcagatcgagattttcatcttgcagaagtgtttaggtgacatggcagaagcaaa 201
                 ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 25501616 tgaagctcagatggagattttcgtcttgcagaagtgcttaggtgacatggcagaggcaaa 25501557

                                                                            
Query: 202      ttctgatgtctcagggcaactgcagaagcagcaagaggcacacaaaggtcttgaggagaa 261
                ||||||||||||||||||||||||||||||| |||||  |  | ||   |  ||||||||
Sbjct: 25501556 ttctgatgtctcagggcaactgcagaagcagaaagagctatgcgaaatccaggaggagaa 25501497

                                                                            
Query: 262      actggcctatttgtcacaaaacaaccagaagcttactgaagggattggttctgtgatgga 321
                | |  ||| |||| || |||||||||||| | | || ||||| |||||||||||||||||
Sbjct: 25501496 attaacctttttgacagaaaacaaccagaggttaacggaaggaattggttctgtgatgga 25501437

                                                                            
Query: 322      agtgctgcagtttgatgagaaatatggatccttggatctgatgaaggttgacatagttgt 381
                ||  || || || ||||| ||||||||||| |||||||| |||||| ||||  || | ||
Sbjct: 25501436 agaactacatttggatgataaatatggatcattggatctaatgaagcttgatgtaatcgt 25501377

                                                                         
Query: 382      gcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagga 438
                ||||||||||||||||||||| |||||| ||||||| || ||||||||||| |||||
Sbjct: 25501376 gcagctcatcttgcatgagatcaagtgcttgctgaatactatttctgatgctcagga 25501320
to top
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score =  295 bits (149), Expect = 6e-77
 Identities = 350/417 (83%)
 Strand = Plus / Minus

                                                                          
Query: 22     caaagaactcacccactcagacaaggctcagttcagtgctttgcagaagcagatagccct 81
              ||||||||| | | |||||| |||| |||||||||||||| | ||||||||| ||  | |
Sbjct: 142942 caaagaactgaactactcaggcaagactcagttcagtgctgtacagaagcagttaagctt 142883

                                                                          
Query: 82     acttctagaagatggacgcaataaggagaaccagcttcaagaggaggagcacaagattgt 141
               || || ||||| || ||   || |||||||||||||||||| |||||||| ||||||||
Sbjct: 142882 cctgctcgaagaaggccgtcgtagggagaaccagcttcaagatgaggagcataagattgt 142823

                                                                          
Query: 142    cgaagctcagatcgagattttcatcttgcagaagtgtttaggtgacatggcagaagcaaa 201
               ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 142822 tgaagctcagatggagattttcgtcttgcagaagtgcttaggtgacatggcagaggcaaa 142763

                                                                          
Query: 202    ttctgatgtctcagggcaactgcagaagcagcaagaggcacacaaaggtcttgaggagaa 261
              ||||||||||||||||||||||||||||||| |||||  |  | ||   |  ||||||||
Sbjct: 142762 ttctgatgtctcagggcaactgcagaagcagaaagagctatgcgaaatccaggaggagaa 142703

                                                                          
Query: 262    actggcctatttgtcacaaaacaaccagaagcttactgaagggattggttctgtgatgga 321
              | |  ||| |||| || |||||||||||| | | || ||||| |||||||||||||||||
Sbjct: 142702 attaacctttttgacagaaaacaaccagaggttaacggaaggaattggttctgtgatgga 142643

                                                                          
Query: 322    agtgctgcagtttgatgagaaatatggatccttggatctgatgaaggttgacatagttgt 381
              ||  || || || ||||| ||||||||||| |||||||| |||||| ||||  || | ||
Sbjct: 142642 agaactacatttggatgataaatatggatcattggatctaatgaagcttgatgtaatcgt 142583

                                                                       
Query: 382    gcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagga 438
              ||||||||||||||||||||| |||||| ||||||| || ||||||||||| |||||
Sbjct: 142582 gcagctcatcttgcatgagatcaagtgcttgctgaatactatttctgatgctcagga 142526
to top
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127003

 Score =  295 bits (149), Expect = 6e-77
 Identities = 350/417 (83%)
 Strand = Plus / Plus

                                                                          
Query: 22     caaagaactcacccactcagacaaggctcagttcagtgctttgcagaagcagatagccct 81
              ||||||||| | | |||||| |||| |||||||||||||| | ||||||||| ||  | |
Sbjct: 100158 caaagaactgaactactcaggcaagactcagttcagtgctgtacagaagcagttaagctt 100217

                                                                          
Query: 82     acttctagaagatggacgcaataaggagaaccagcttcaagaggaggagcacaagattgt 141
               || || ||||| || ||   || |||||||||||||||||| |||||||| ||||||||
Sbjct: 100218 cctgctcgaagaaggccgtcgtagggagaaccagcttcaagatgaggagcataagattgt 100277

                                                                          
Query: 142    cgaagctcagatcgagattttcatcttgcagaagtgtttaggtgacatggcagaagcaaa 201
               ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||
Sbjct: 100278 tgaagctcagatggagattttcgtcttgcagaagtgcttaggtgacatggcagaggcaaa 100337

                                                                          
Query: 202    ttctgatgtctcagggcaactgcagaagcagcaagaggcacacaaaggtcttgaggagaa 261
              ||||||||||||||||||||||||||||||| |||||  |  | ||   |  ||||||||
Sbjct: 100338 ttctgatgtctcagggcaactgcagaagcagaaagagctatgcgaaatccaggaggagaa 100397

                                                                          
Query: 262    actggcctatttgtcacaaaacaaccagaagcttactgaagggattggttctgtgatgga 321
              | |  ||| |||| || |||||||||||| | | || ||||| |||||||||||||||||
Sbjct: 100398 attaacctttttgacagaaaacaaccagaggttaacggaaggaattggttctgtgatgga 100457

                                                                          
Query: 322    agtgctgcagtttgatgagaaatatggatccttggatctgatgaaggttgacatagttgt 381
              ||  || || || ||||| ||||||||||| |||||||| |||||| ||||  || | ||
Sbjct: 100458 agaactacatttggatgataaatatggatcattggatctaatgaagcttgatgtaatcgt 100517

                                                                       
Query: 382    gcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagga 438
              ||||||||||||||||||||| |||||| ||||||| || ||||||||||| |||||
Sbjct: 100518 gcagctcatcttgcatgagatcaagtgcttgctgaatactatttctgatgctcagga 100574
to top
>emb|AJ606023.1| Triticum aestivum partial mRNA for putative centromeric protein
          Length = 740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 152/189 (80%)
 Strand = Plus / Plus

                                                                       
Query: 253 tgaggagaaactggcctatttgtcacaaaacaaccagaagcttactgaagggattggttc 312
           |||||||||| ||| ||  ||||||||  | || |||||||| ||||||||||| |||||
Sbjct: 318 tgaggagaaattggactgcttgtcacaggataatcagaagctaactgaagggatcggttc 377

                                                                       
Query: 313 tgtgatggaagtgctgcagtttgatgagaaatatggatccttggatctgatgaaggttga 372
             |   ||||||  |||| || |||||||| ||||  |||||||| |  |||||| ||||
Sbjct: 378 attacgggaagtattgcacttggatgagaagtatgagtccttggaccaaatgaagcttga 437

                                                                       
Query: 373 catagttgtgcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgc 432
           |||| || |||||||||||||||||||||| || | | |   |||||| || ||||||||
Sbjct: 438 cataattttgcagctcatcttgcatgagatcaacttcttaaggaacacaatatctgatgc 497

                    
Query: 433 ccaggatgt 441
           |||||||||
Sbjct: 498 ccaggatgt 506



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 113 cagcttcaagaggaggagcacaagattgtcgaagctcaga 152
           ||||||||||||||||||   ||||||||| |||||||||
Sbjct: 178 cagcttcaagaggaggagatgaagattgtcaaagctcaga 217
to top
>ref|XM_468999.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4836

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                        
Query: 378  ttgtgcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagg 437
            ||||||| ||||||||||||||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 2174 ttgtgcatctcatcttgcatgagatcaactgcctactgaacactatatctgatgctcagg 2233

                
Query: 438  atgt 441
            ||||
Sbjct: 2234 atgt 2237
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 378      ttgtgcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagg 437
                ||||||| ||||||||||||||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 24317186 ttgtgcatctcatcttgcatgagatcaactgcctactgaacactatatctgatgctcagg 24317127

                    
Query: 438      atgt 441
                ||||
Sbjct: 24317126 atgt 24317123
to top
>gb|AY224555.1| Oryza sativa (japonica cultivar-group) isolate 26644 centromere
           protein-like protein mRNA, partial cds
          Length = 717

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 378 ttgtgcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagg 437
           ||||||| ||||||||||||||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 203 ttgtgcatctcatcttgcatgagatcaactgcctactgaacactatatctgatgctcagg 262

               
Query: 438 atgt 441
           ||||
Sbjct: 263 atgt 266
to top
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 378   ttgtgcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagg 437
             ||||||| ||||||||||||||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 63438 ttgtgcatctcatcttgcatgagatcaactgcctactgaacactatatctgatgctcagg 63497

                 
Query: 438   atgt 441
             ||||
Sbjct: 63498 atgt 63501
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 378      ttgtgcagctcatcttgcatgagattaagtgcctgctgaacaccatttctgatgcccagg 437
                ||||||| ||||||||||||||||| || ||||| |||||||| || |||||||| ||||
Sbjct: 24234655 ttgtgcatctcatcttgcatgagatcaactgcctactgaacactatatctgatgctcagg 24234596

                    
Query: 438      atgt 441
                ||||
Sbjct: 24234595 atgt 24234592
to top
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence
          Length = 144217

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 146   gctcagatcgagattttcatcttgcagaagtgt 178
             |||||||| || |||||||||||||||||||||
Sbjct: 67241 gctcagattgaaattttcatcttgcagaagtgt 67273
to top
>gb|BC075288.1| Xenopus tropicalis cDNA clone IMAGE:6999991
          Length = 3659

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 52  gttcagtgctttgcagaagcaga 74
           |||||||||||||||||||||||
Sbjct: 590 gttcagtgctttgcagaagcaga 612
to top
>emb|CR926284.2| Xenopus tropicalis finished cDNA, clone TEgg003l22
          Length = 2569

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 52  gttcagtgctttgcagaagcaga 74
           |||||||||||||||||||||||
Sbjct: 604 gttcagtgctttgcagaagcaga 626
to top
>emb|AL138694.18| Human DNA sequence from clone RP11-330C15 on chromosome 13q33.1-34
             Contains a pseudogene similar to part of host cell factor
             2 (HCF-2) and a CpG island, complete sequence
          Length = 157264

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 7     agagagagagaagagcaaagaa 28
             ||||||||||||||||||||||
Sbjct: 86212 agagagagagaagagcaaagaa 86191
to top
>emb|AL772235.4| Mouse DNA sequence from clone RP23-155K12 on chromosome 2, complete
              sequence
          Length = 190410

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 403    taagtgcctgctgaacaccatt 424
              ||||||||||||||||||||||
Sbjct: 165997 taagtgcctgctgaacaccatt 165976
to top
>gb|AC105169.9| Mus musculus chromosome 10, clone RP24-124K4, complete sequence
          Length = 167310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      gaggctagagagagagaagag 21
              |||||||||||||||||||||
Sbjct: 127720 gaggctagagagagagaagag 127740
to top
>emb|AL589684.7| Human DNA sequence from clone RP11-437J19 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 94555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 402   ttaagtgcctgctgaacaccatttc 426
             ||||||||||||||||| |||||||
Sbjct: 87913 ttaagtgcctgctgaactccatttc 87889
to top
>gb|AC154263.2| Mus musculus BAC clone RP24-308C1 from chromosome 14, complete sequence
          Length = 196901

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    ctatttgtcacaaaacaacca 288
              |||||||||||||||||||||
Sbjct: 147597 ctatttgtcacaaaacaacca 147577
to top
>gb|AC010745.4| Homo sapiens BAC clone RP11-549D18 from 2, complete sequence
          Length = 189894

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  agaagcagcaagaggcacaca 245
            |||||||||||||||||||||
Sbjct: 2793 agaagcagcaagaggcacaca 2813
to top
>gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromosome unknown, complete
              sequence
          Length = 173847

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 358    tctgatgaaggttgacatagt 378
              |||||||||||||||||||||
Sbjct: 125271 tctgatgaaggttgacatagt 125251
to top
>emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 map Xq28, complete
             sequence
          Length = 117521

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 358   tctgatgaaggttgacatagt 378
             |||||||||||||||||||||
Sbjct: 43646 tctgatgaaggttgacatagt 43626
to top
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete
              sequence
          Length = 193057

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 7      agagagagagaagagcaaaga 27
              |||||||||||||||||||||
Sbjct: 149822 agagagagagaagagcaaaga 149802
to top
>gb|AC141583.3| Rattus norvegicus 9 BAC CH230-486H15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 132946

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aaagaactcacccactcaga 42
             ||||||||||||||||||||
Sbjct: 46557 aaagaactcacccactcaga 46538
to top
>ref|XM_416174.1| PREDICTED: Gallus gallus similar to down-regulated in metastasis
            (LOC417933), mRNA
          Length = 9393

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  cctgctgaacaccatttctg 428
            ||||||||||||||||||||
Sbjct: 1836 cctgctgaacaccatttctg 1855
to top
>gb|AC107179.5| Rattus norvegicus 9 BAC CH230-155P21 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 204235

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aaagaactcacccactcaga 42
              ||||||||||||||||||||
Sbjct: 173225 aaagaactcacccactcaga 173206
to top
>ref|XM_448578.1| Candida glabrata CBS138, CAGL0K08206g partial mRNA
          Length = 3510

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  taggtgacatggcagaagca 199
            ||||||||||||||||||||
Sbjct: 3208 taggtgacatggcagaagca 3189
to top
>gb|AC123839.2| Mus musculus BAC clone RP23-392K4 from 17, complete sequence
          Length = 204402

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    ctggcctatttgtcacaaaa 282
              ||||||||||||||||||||
Sbjct: 146952 ctggcctatttgtcacaaaa 146971
to top
>gb|AC142341.1| Pan troglodytes BAC clone RP43-43C1 from 7, complete sequence
          Length = 132532

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     agagagagaagagcaaagaa 28
             ||||||||||||||||||||
Sbjct: 34676 agagagagaagagcaaagaa 34695
to top
>emb|AL603840.9| Human DNA sequence from clone RP11-365M18 on chromosome 1 Contains part
              of a novel gene, complete sequence
          Length = 178121

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aggctagagagagagaagag 21
              ||||||||||||||||||||
Sbjct: 109329 aggctagagagagagaagag 109348
to top
>emb|AL359697.23| Human DNA sequence from clone RP11-399C16 on chromosome 10 Contains the
             3' end of the MLLT10 gene for myeloid/lymphoid or
             mixed-lineage leukemia (trithorax homolog, Drosophila);
             translocated to, 10 (AF10), the 3' end of the DNAJC1 gene
             for DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJL1)
             and a CpG island, complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   caagaggaggagcacaagat 138
             ||||||||||||||||||||
Sbjct: 15744 caagaggaggagcacaagat 15763
to top
>emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chromosome 1 Contains part
             of the DISC1 gene for disrupted in schizophrenia 1 and a
             novel gene, complete sequence
          Length = 98151

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   cagaagcagcaagaggcaca 243
             ||||||||||||||||||||
Sbjct: 42902 cagaagcagcaagaggcaca 42883
to top
>emb|AL138772.8| Human DNA sequence from clone RP4-576A20 on chromosome 10, complete
             sequence
          Length = 55835

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   tgatgtctcagggcaactgc 224
             ||||||||||||||||||||
Sbjct: 27270 tgatgtctcagggcaactgc 27251
to top
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    taggtgacatggcagaagca 199
              ||||||||||||||||||||
Sbjct: 817782 taggtgacatggcagaagca 817763
to top
>gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 230983

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     gagagagaagagcaaagaac 29
              ||||||||||||||||||||
Sbjct: 132954 gagagagaagagcaaagaac 132973
to top
>emb|AL672030.10| Mouse DNA sequence from clone RP23-199E12 on chromosome 11, complete
             sequence
          Length = 78258

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   acaccatttctgatgcccag 436
             ||||||||||||||||||||
Sbjct: 69366 acaccatttctgatgcccag 69385
to top
>gb|AC112251.5| Homo sapiens BAC clone RP11-734I18 from 4, complete sequence
          Length = 112537

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     agagagagagaagagcaaag 26
             ||||||||||||||||||||
Sbjct: 61953 agagagagagaagagcaaag 61972
to top
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     tggaagtgctgcagtttgat 337
               ||||||||||||||||||||
Sbjct: 1681313 tggaagtgctgcagtttgat 1681294
to top
>gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, complete sequence
          Length = 186127

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tagagagagagaagagcaaa 25
              ||||||||||||||||||||
Sbjct: 168458 tagagagagagaagagcaaa 168477
to top
>gb|AC160144.6| Mus musculus 10 BAC RP24-130G2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 163335

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    ctgcagaagcagcaagaggc 240
              ||||||||||||||||||||
Sbjct: 145838 ctgcagaagcagcaagaggc 145819
to top
>ref|XM_230936.3| PREDICTED: Rattus norvegicus similar to C20orf174 (LOC296449), mRNA
          Length = 4122

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  tctcagggcaactgcagaagcagc 233
            |||||||||||| |||||||||||
Sbjct: 2601 tctcagggcaacagcagaagcagc 2578
to top
>gb|AC012104.6|AC012104 Mus musculus chromosome , clone CT7-478J15, complete sequence
          Length = 124373

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    gagagagaagagcaaagaac 29
             ||||||||||||||||||||
Sbjct: 22072 gagagagaagagcaaagaac 22091
to top
>gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 151309

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   ctgcagaagcagcaagaggc 240
             ||||||||||||||||||||
Sbjct: 55022 ctgcagaagcagcaagaggc 55003
to top
>dbj|AP000926.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-762B21, complete
              sequence
          Length = 196972

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      agagagagaagagcaaagaa 28
              ||||||||||||||||||||
Sbjct: 153215 agagagagaagagcaaagaa 153234
to top
>dbj|AP001970.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2216M2, complete
            sequence
          Length = 90211

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    agagagagaagagcaaagaa 28
            ||||||||||||||||||||
Sbjct: 7697 agagagagaagagcaaagaa 7716
to top
>dbj|AP005363.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1653C10, complete
             sequence
          Length = 158682

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tagagagagagaagagcaaa 25
             ||||||||||||||||||||
Sbjct: 27656 tagagagagagaagagcaaa 27637
to top
>emb|CR450830.9| Zebrafish DNA sequence from clone CH211-286F9 in linkage group 23,
              complete sequence
          Length = 143914

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      agagagagagaagagcaaag 26
              ||||||||||||||||||||
Sbjct: 133754 agagagagagaagagcaaag 133735
to top
>gb|AF072536.1|AF072536 Arabidopsis thaliana H-protein promoter binding factor-1 (HPPBF-1)
            mRNA, complete cds
          Length = 2497

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  cttggatctgatgaaggttg 371
            ||||||||||||||||||||
Sbjct: 1821 cttggatctgatgaaggttg 1802
to top
>emb|AL929381.9| Mouse DNA sequence from clone RP23-266K3 on chromosome 2, complete
             sequence
          Length = 112349

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aggctagagagagagaagag 21
             ||||||||||||||||||||
Sbjct: 66760 aggctagagagagagaagag 66741
to top
>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete
             sequence
          Length = 183340

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 192   cagaagcaaattctgatgtctcag 215
             |||||||||||||||| |||||||
Sbjct: 38695 cagaagcaaattctgaggtctcag 38672
to top
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial
              variable region, strain 129/Sv
          Length = 1382053

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      agagagagagaagagcaaag 26
              ||||||||||||||||||||
Sbjct: 687396 agagagagagaagagcaaag 687415



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      agagagagagaagagcaaag 26
              ||||||||||||||||||||
Sbjct: 626743 agagagagagaagagcaaag 626762
to top
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      gagagagagaagagcaaaga 27
              ||||||||||||||||||||
Sbjct: 219626 gagagagagaagagcaaaga 219607


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,393,475
Number of Sequences: 3902068
Number of extensions: 9393475
Number of successful extensions: 131429
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131088
Number of HSP's gapped (non-prelim): 340
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top