ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl30c10 |
|---|---|
| Clone Library Name | barley_pub |
>GLN3_YEAST (P18494) Nitrogen regulatory protein GLN3| Length = 730 Score = 37.4 bits (85), Expect = 0.021 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 25/142 (17%) Frame = +2 Query: 77 SADESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSK--------RSSRTEVARPYCQ 232 S S + + + N N H S I Q +N S S+ + + P+ + Sbjct: 188 STSNSNINQPSINNNSNTNAQSHHSFNIYKLQNNNSSSSAMNITNNNNSNNSNIQHPFLK 247 Query: 233 VKS---LGSSRETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSN--PKASNTCPV---- 385 L SS T+ + L+K S T + K ++ SSS+SN P N P+ Sbjct: 248 KSDSIGLSSSNTTNSVRKNSLIKPMSSTSLANFKRAASVSSSISNMEPSGQNKKPLIQCF 307 Query: 386 -CKVFSSP-------SNTTLNA 427 CK F +P NT NA Sbjct: 308 NCKTFKTPLWRRSPEGNTLCNA 329
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 33.9 bits (76), Expect = 0.23 Identities = 30/134 (22%), Positives = 55/134 (41%) Frame = +2 Query: 26 AGLTNVNTTGINLQSCQSADESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSR 205 + LT+ + T +L S + SL + T + +S A + ++ S ++ Sbjct: 107 SSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNS 166 Query: 206 TEVARPYCQVKSLGSSRETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSNPKASNTCPV 385 T A P S SS ++ S + + + + SSS+S+ ASN+ Sbjct: 167 TTSATPTSSATS--SSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATS 224 Query: 386 CKVFSSPSNTTLNA 427 + SS N+T +A Sbjct: 225 SSLASSSLNSTTSA 238 Score = 31.2 bits (69), Expect = 1.5 Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 4/141 (2%) Frame = +2 Query: 17 AREAGLTNVNTTGINLQSCQSADESLQGKT--ATDQGGNVNEPGHTSEAIQAYQ--EDNI 184 A + LT+ + +L S S S T A+ ++ TS ++ + ++ Sbjct: 70 ASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSL 129 Query: 185 CSKRSSRTEVARPYCQVKSLGSSRETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSNPK 364 S + + +A SL SS TS L S + + S SSS+S+ Sbjct: 130 ASSSITSSSLASSSITSSSLASSSTTSSS----LASSSTNSTTSATPTSSATSSSLSSTA 185 Query: 365 ASNTCPVCKVFSSPSNTTLNA 427 ASN+ + SS N+T +A Sbjct: 186 ASNSATSSSLASSSLNSTTSA 206
>HAP1_YEAST (P12351) Heme-responsive zinc finger transcription factor HAP1| (Heme activator protein 1) (CYP1 activatory protein) Length = 1483 Score = 33.5 bits (75), Expect = 0.30 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 20/148 (13%) Frame = +2 Query: 38 NVNTTGINLQSCQSADESLQGKTATDQGGNVNE---PGH-TSEAIQAYQEDN-------I 184 N + I + S S TAT G N + P H +S++ + ++ N I Sbjct: 7 NSSVPSIASMTQSSVSRSPNMHTATTPGANTSSNSPPLHMSSDSSKIKRKRNRIPLSCTI 66 Query: 185 CSKRSSRTEVARPYCQ------VKSLGSSRET--SEKKGKLLVKSGSMTDIRQR-KDLSN 337 C KR + + RP+CQ V L E +E+ K L+K + +R+R K L Sbjct: 67 CRKRKVKCDKLRPHCQQCTKTGVAHLCHYMEQTWAEEAEKELLKDNELKKLRERVKSLEK 126 Query: 338 NSSSVSNPKASNTCPVCKVFSSPSNTTL 421 S V + +SN+ K +++P ++ L Sbjct: 127 TLSKVHSSPSSNS---LKSYNTPESSNL 151
>2A5D_YEAST (P38903) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta isoform (PP2A, B subunit, B' delta isoform) (Protein RTS1) (Protein SCS1) Length = 757 Score = 32.7 bits (73), Expect = 0.52 Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 3/155 (1%) Frame = +2 Query: 14 KAREAGLTNVNTTGINLQSCQSADESLQGKTATDQGGNVNEPG-HTSEAIQAYQEDNICS 190 K A ++ TT + S S + +GK Q G+V G H S + + S Sbjct: 43 KPASASSSSHGTTHSSASSTGSKSTTEKGK----QSGSVPSQGKHHSSSTSKTKTATTPS 98 Query: 191 KRSSRTEVARPYCQVKSLGSS--RETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSNPK 364 SS + + V GSS ++TS +KG+ K Q++ S++S+++ NP Sbjct: 99 SSSSSSRSS----SVSRSGSSSTKKTSSRKGQEQSKQSQQPSQSQKQGSSSSSAAIMNP- 153 Query: 365 ASNTCPVCKVFSSPSNTTLNAHIDQCLYAVSNAEP 469 PV V +T+ H L +A P Sbjct: 154 ----TPVLTVTKDDKSTSGEDHAHPTLLGAVSAVP 184
>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)| Length = 220 Score = 31.6 bits (70), Expect = 1.2 Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%) Frame = +2 Query: 44 NTTGI---NLQSCQSADESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEV 214 NT+G N S++ S G +A + G+ + S I + N S SS+ Sbjct: 42 NTSGSSRNNSSGSSSSNNSSSGSSAGNSSGSSSSNSSGSSGIGSLSR-NSSSSSSSQAAG 100 Query: 215 ARPYCQVKSLGSSRETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSNPKASNTCPVCKV 394 + +V + GSS +S S S ++ N SSS S+ A N+ +V Sbjct: 101 SSSSRRVSADGSSSSSSASNSAAAQNSASSSETINADGSENESSSSSSSAAQNSATRSQV 160 Query: 395 FSS 403 ++ Sbjct: 161 INA 163
>PGLR1_PECCC (P18192) Endo-polygalacturonase precursor (EC 3.2.1.15)| Length = 402 Score = 31.6 bits (70), Expect = 1.2 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = +2 Query: 332 SNNSSSVSNPKASNTCPVCKVFSSPSNTTLNAHIDQC 442 +++S +VS PKA ++C V K SS + +T+ ++ C Sbjct: 26 ASDSRTVSEPKAPSSCTVLKADSSTATSTIQKALNNC 62
>OM34_MOUSE (Q9CYG7) Mitochondrial import receptor subunit TOM34 (Translocase| of outer membrane 34 kDa subunit) Length = 309 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = +2 Query: 77 SADESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYCQV 235 SA + + K ++G ++ + G+ +AI+ Y E +CS S T R C + Sbjct: 186 SAGDVERAKALKEEGNDLVKKGNHKKAIEKYSESLLCSSLESATYSNRALCHL 238
>MDM4_HUMAN (O15151) Mdm4 protein (p53-binding protein Mdm4) (Mdm2-like| p53-binding protein) (Mdmx protein) (Double minute 4 protein) Length = 490 Score = 31.2 bits (69), Expect = 1.5 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = +2 Query: 251 SRETSEKKGKL----LVKSGSMTDIRQRKDLSNNSSSVSNPKASNTCPVCKVFSSPS 409 + +TSE+ GK+ +++ G D+ K LS+++ + C CK F+SPS Sbjct: 260 TEQTSEEVGKVSDKKVIEVGKNDDLEDSKSLSDDTDVEVTSEDEWQCTECKKFNSPS 316
>Y064_MYCGE (P47310) Hypothetical protein MG064| Length = 1331 Score = 30.8 bits (68), Expect = 2.0 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Frame = +2 Query: 128 VNEPGHTSEAIQAYQEDNICS-KRSSRTEVARPYCQVKSLGSSR-ETSEKKGKLLVKSGS 301 V+EP ++ + N+ S K+S + ++KS G T+ K G+ + Sbjct: 186 VSEPNDLVNSLVIFDGQNLSSSKQSDFNNFLNQFNEIKSKGKDNLSTTLKTGQYQAFLQT 245 Query: 302 MTDIRQRKDLSNNSSS---VSNPKASNTCPVCKVFSSPSNTT 418 + D Q + + +SNP +S T V +F +PS T Sbjct: 246 LFDYAQASETTLKDQLQKLISNPDSSETNQVKNLFDTPSTLT 287
>FURI1_XENLA (P29119) Furin-1 precursor (EC 3.4.21.75) (Paired basic amino acid| residue cleaving enzyme) (PACE) (Dibasic-processing enzyme) Length = 783 Score = 30.4 bits (67), Expect = 2.6 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = -3 Query: 341 SCLINLFSDGYLS*SLT*LATCPSSLKSHVMNQDFSLDNRVEQPLSVN 198 SC++ +GY + + +CP S + N ++LDN +E PL VN Sbjct: 593 SCIV--CEEGYFLHQKSCIKSCPQGFTSSIQNIHYTLDNNIE-PLLVN 637
>HANG_DROME (Q9VXG1) Zinc finger protein hangover| Length = 1959 Score = 30.4 bits (67), Expect = 2.6 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +2 Query: 296 GSMTDIRQRKDLSNNSSSVSNPKASNTCPVCK-VFSSPSNTTLNAHIDQCLYAVSNA 463 GS+ + D SNNSS V CP+C VFS +N L+ H+ + Y SNA Sbjct: 883 GSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFS--NNIGLSNHM-RSHYTASNA 936
>VGLB_HHV1P (P08665) Glycoprotein B precursor| Length = 904 Score = 30.0 bits (66), Expect = 3.3 Identities = 23/91 (25%), Positives = 37/91 (40%) Frame = +2 Query: 86 ESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETS 265 + L+ T D G E G EA K + E+ R V ++ + + Sbjct: 815 KELKNPTNPDASGEGEEGGDFDEA-----------KLAEAREMIRYMALVSAMERTEHKA 863 Query: 266 EKKGKLLVKSGSMTDIRQRKDLSNNSSSVSN 358 +KKG + S +TD+ RK + N + V N Sbjct: 864 KKKGTSALLSAKVTDMVMRKRRNTNYTQVPN 894
>VGLB_HHV1K (P06437) Glycoprotein B precursor| Length = 904 Score = 30.0 bits (66), Expect = 3.3 Identities = 23/91 (25%), Positives = 37/91 (40%) Frame = +2 Query: 86 ESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETS 265 + L+ T D G E G EA K + E+ R V ++ + + Sbjct: 815 KELKNPTNPDASGEGEEGGDFDEA-----------KLAEAREMIRYMALVSAMERTEHKA 863 Query: 266 EKKGKLLVKSGSMTDIRQRKDLSNNSSSVSN 358 +KKG + S +TD+ RK + N + V N Sbjct: 864 KKKGTSALLSAKVTDMVMRKRRNTNYTQVPN 894
>VGLB_HHV11 (P10211) Glycoprotein B precursor| Length = 904 Score = 30.0 bits (66), Expect = 3.3 Identities = 23/91 (25%), Positives = 37/91 (40%) Frame = +2 Query: 86 ESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETS 265 + L+ T D G E G EA K + E+ R V ++ + + Sbjct: 815 KELKNPTNPDASGEGEEGGDFDEA-----------KLAEAREMIRYMALVSAMERTEHKA 863 Query: 266 EKKGKLLVKSGSMTDIRQRKDLSNNSSSVSN 358 +KKG + S +TD+ RK + N + V N Sbjct: 864 KKKGTSALLSAKVTDMVMRKRRNTNYTQVPN 894
>VGLB_HHV1F (P06436) Glycoprotein B precursor| Length = 903 Score = 30.0 bits (66), Expect = 3.3 Identities = 23/91 (25%), Positives = 37/91 (40%) Frame = +2 Query: 86 ESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETS 265 + L+ T D G E G EA K + E+ R V ++ + + Sbjct: 814 KELKNPTNPDASGEGEEGGDFDEA-----------KLAEAREMIRYMALVSAMERTEHKA 862 Query: 266 EKKGKLLVKSGSMTDIRQRKDLSNNSSSVSN 358 +KKG + S +TD+ RK + N + V N Sbjct: 863 KKKGTSALLSAKVTDMVMRKRRNTNYTQVPN 893
>TRIM6_MOUSE (Q8BGE7) Tripartite motif protein 6| Length = 488 Score = 29.6 bits (65), Expect = 4.4 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +2 Query: 329 LSNNSSSVSNPKASNTCPVCKVFSSPSNTTLNAHI 433 + N+++SV ++CPVC+ P N N H+ Sbjct: 40 IGNSNNSVFGQGGRSSCPVCRTSYQPGNLRPNRHL 74
>OM34_HUMAN (Q15785) Mitochondrial import receptor subunit TOM34 (Translocase| of outer membrane 34 kDa subunit) (hTom34) Length = 309 Score = 29.3 bits (64), Expect = 5.7 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = +2 Query: 77 SADESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYC 229 SA + + + ++G + + G+ +AI+ Y E +CS S T R C Sbjct: 186 SAGDVEKARVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALC 236
>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1| Length = 726 Score = 29.3 bits (64), Expect = 5.7 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Frame = +2 Query: 188 SKRSSRTEVARPYCQVKSLGSSRETSEKKGKLLVK-----SGSMTDIRQRKDLSNNSSSV 352 + + ++ V + V SLG RE EKK K L + G + +R + D +S Sbjct: 642 ASKEAKENVEDAHILVMSLGKEREVLEKKVKKLEEDLGSAKGEILRMRSQPDSVKAVNST 701 Query: 353 SN-PKASNTCPVCKVFSSPSNTT 418 N K+ NT V KV ++T Sbjct: 702 DNKEKSDNTVTVKKVVRRRKSST 724
>POLK_HUMAN (Q9UBT6) DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)| Length = 870 Score = 29.3 bits (64), Expect = 5.7 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = +2 Query: 377 CPVCKVFSSPSNTTL-NAHIDQCL 445 CPVC V S+ TL N H+D CL Sbjct: 779 CPVCNVEQKTSDLTLFNVHVDVCL 802
>IR12_HCMVA (P16810) Hypothetical protein IRL12 (TRL12)| Length = 416 Score = 29.3 bits (64), Expect = 5.7 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = +2 Query: 332 SNNSSSVSNPKASNTCPVCKVFSSPSNTT 418 + N++S+++P ++T V VFS+P+N T Sbjct: 35 TTNTASITSPNTASTTFVTSVFSTPNNNT 63
>TBX3_MOUSE (P70324) T-box transcription factor TBX3 (T-box protein 3)| Length = 741 Score = 29.3 bits (64), Expect = 5.7 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +2 Query: 155 AIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETSEKKGKLLVKSGSMTDIRQRKDLS 334 A+ AYQ D I + A+ + + G+ R EK+ +L ++S + + R +K+ S Sbjct: 280 AVTAYQNDKITQLKIDNNPFAKGF---RDTGNGRR--EKRKQLTLQSMRVFEERHKKETS 334 Query: 335 NNSSS 349 + SSS Sbjct: 335 DESSS 339
>NCBP1_HUMAN (Q09161) Nuclear cap-binding protein subunit 1 (80 kDa nuclear| cap-binding protein) (NCBP 80 kDa subunit) (CBP80) Length = 790 Score = 29.3 bits (64), Expect = 5.7 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = -2 Query: 423 FKVVFDGDEKTLHTGQV-FEAFGFETEL--ELFDKSFL*RISVIEPDLTSNLPFFSEVSR 253 FK + + DE LH +V FE + ++ L DK R +++ +N F SE+SR Sbjct: 573 FKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMI--RTQIVDCAAVANWIFSSELSR 630 Query: 252 DEPRLF 235 D RLF Sbjct: 631 DFTRLF 636
>OXAA_THETN (Q8R6K6) Membrane protein oxaA| Length = 206 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = -2 Query: 129 TFPPWSVAVFPWSDSSAD*HDWRLIPV---VFTFVKPASLAFTKS 4 T+P +S A F W S A+ + +IP+ V T++ A +A KS Sbjct: 110 TYPAFSTASFLWMHSLAERDPYYIIPILATVTTYISSAMVATDKS 154
>TRI34_MOUSE (Q99PP6) Tripartite motif protein 34| Length = 485 Score = 28.9 bits (63), Expect = 7.5 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +2 Query: 329 LSNNSSSVSNPKASNTCPVCKVFSSPSNTTLNAHI 433 L ++V NP+ ++CPVC S N N H+ Sbjct: 39 LITKKNAVINPREKSSCPVCGTRFSLENLQANKHL 73
>YHCR_BACSU (P54602) Endonuclease yhcR precursor (EC 3.1.31.-)| Length = 1217 Score = 28.9 bits (63), Expect = 7.5 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 6/140 (4%) Frame = +2 Query: 44 NTTGI-NLQSCQSADESL-----QGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSR 205 NTTG+ N+QS D++ Q T + G +NE I A Q K S+ Sbjct: 148 NTTGLKNVQSMNVTDDTKTPPAEQQVTINEARGRLNEEVTIKGIITADQNAIGGGKLSTF 207 Query: 206 TEVARPYCQVKSLGSSRETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSNPKASNTCPV 385 + + S + K+G + +G +T + K++ NSS + +++ + P Sbjct: 208 LQDETGGINIYSPSPEQFPELKEGMDVTVTGKITSYQGLKEIVPNSSGIKINQSNQSLP- 266 Query: 386 CKVFSSPSNTTLNAHIDQCL 445 +P + T+N I+ L Sbjct: 267 -----APKHLTINELINGSL 281
>LRP3_RAT (O88204) Low-density lipoprotein receptor-related protein 3| precursor (rLRp105) Length = 770 Score = 28.9 bits (63), Expect = 7.5 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 Query: 338 CLINLFSDGYLS*SLT*LATCPSSLKSH 255 CL+NLF G LS ++ LA C L+ H Sbjct: 23 CLVNLFLTGRLSSAVPALAACSGKLEQH 50
>CDC4_YEAST (P07834) Cell division control protein 4 (F-box protein CDC4) (E3| ubiquitin ligase complex SCF subunit CDC4) Length = 779 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = +2 Query: 326 DLSNN--SSSVSNPKASNTCPVCKVFSSPSNTTLNAHIDQCLYAVSNAEPVVET 481 D+SNN S++++NP P+ SSP TT A + + +N ++E+ Sbjct: 163 DVSNNVNSATINNPMEEGALPLSPTASSPGTTTPLAKTTKTINNNNNIADLIES 216
>RMT2_DEBHA (Q6BNS9) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 434 Score = 28.5 bits (62), Expect = 9.7 Identities = 22/81 (27%), Positives = 36/81 (44%) Frame = +2 Query: 86 ESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETS 265 E +QG+ T++ EP +TS+ I +V +P +K SS + + Sbjct: 153 EGIQGEETTEEERKEEEPSNTSDII-------------DEQKVEQPKEDLKEDPSSNQET 199 Query: 266 EKKGKLLVKSGSMTDIRQRKD 328 K KL K G++ + RKD Sbjct: 200 YLKTKLEYKDGALV-TKDRKD 219
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = +2 Query: 329 LSNNSSSVSNPKASNTCPVCKVFSSPSNTTLNAHI 433 L+ N K ++CPVC++ P N N H+ Sbjct: 39 LTANHKKSMLDKGESSCPVCRISYQPENIRPNRHV 73
>POLK_MOUSE (Q9QUG2) DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)| Length = 852 Score = 28.5 bits (62), Expect = 9.7 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%) Frame = +2 Query: 191 KRSSRTEVARPYCQVKSLGSSRETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSNPKAS 370 KRS R + + K+ G ++ ++L S ++ + + + S NS N + Sbjct: 570 KRSERISNCQDTSRCKTAG------QQALQILEPSQALKKLSESFETSENS----NDCQT 619 Query: 371 NTCPVC-KVFSSPSNTTLNAHIDQCLYAVSNAE 466 CPVC + S N H+D+CL S +E Sbjct: 620 FICPVCFREQEGVSLEAFNEHVDECLDGPSTSE 652
>LRP4_HUMAN (O75096) Low-density lipoprotein receptor-related protein 4| precursor (Multiple epidermal growth factor-like domains 7) Length = 1950 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = +2 Query: 38 NVNTTGINLQSCQSADESLQGKTATDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVA 217 NVN G Q CQ ++Q T G + E GHT + + E+ CS+ + +E A Sbjct: 404 NVNNGGC-AQKCQMVRGAVQCTCHT--GYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGA 460
>MIG1_CANAL (Q9Y7G2) Regulatory protein MIG1| Length = 574 Score = 28.5 bits (62), Expect = 9.7 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Frame = +2 Query: 215 ARPYCQVKSLGSSRETSEKKGKL----LVKSGSMTDIRQRKDLSNNSSSVSNPKASNTCP 382 +RP + SLGSS E + G L ++ D Q+K SNN S + N +S+ Sbjct: 295 SRPNSTLHSLGSSPENNNASGPLSGVPTPSFSNLNDYFQQKSNSNN-SRLFNASSSSLSS 353 Query: 383 VCKVFSSPSNTTL 421 + S S+T L Sbjct: 354 LSGKIRSSSSTNL 366
>EAF3_YEAST (Q12432) Chromatin modification-related protein EAF3| (ESA1-associated factor 3) Length = 401 Score = 28.5 bits (62), Expect = 9.7 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 152 EAIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETSEKKGKLLVKSGSMTDIRQRKDL 331 + I+AY E+NI K+ E K S +KK KL G ++ +RK Sbjct: 95 DRIRAYNEENIAMKKRLANE-------AKEAKKSLLEQQKKKKLSTSLGGPSNGGKRKGD 147 Query: 332 SNNSSSVS 355 S +++S+S Sbjct: 148 SRSNASIS 155
>ZN318_HUMAN (Q5VUA4) Zinc finger protein 318 (Endocrine regulatory protein)| Length = 2099 Score = 28.5 bits (62), Expect = 9.7 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +2 Query: 236 KSLGSSRETSEKKGKLLVKSGSMTDIRQ-RKDLSNNSSSVSNPKASNTCPVCKVFSSPSN 412 KSL SRE +EK GK KS S + SN S V+N K P K SP + Sbjct: 810 KSLSDSREPTEKPGK-AEKSKSPEKVSSFSNSSSNKESKVNNEKFRTKSP--KPAESPQS 866 Query: 413 TT 418 T Sbjct: 867 AT 868
>BLM_XENLA (Q9DEY9) Bloom syndrome protein homolog (EC 3.6.1.-) (xBLM)| Length = 1364 Score = 28.5 bits (62), Expect = 9.7 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 15/76 (19%) Frame = +2 Query: 248 SSRETSEKKGKLLVKSGSMTDIRQRKDLSNNSSSVSNPKA------------SNTCPVC- 388 S+ + + KK + GS+T + + DL + +SVS PK+ NT PV Sbjct: 119 STEDAASKKTGINTSFGSVTSLEEWDDLDDFDTSVSPPKSHAGKGGKTPQKCKNTSPVAS 178 Query: 389 -KVFS-SPSNTTLNAH 430 K+ S SP T H Sbjct: 179 FKIQSISPEGPTTEKH 194
>CACB2_RAT (Q8VGC3) Voltage-dependent L-type calcium channel beta-2 subunit| (CAB2) (Calcium channel, voltage-dependent, beta 2 subunit) Length = 655 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +2 Query: 110 TDQGGNVNEPGHTSEAIQAYQEDNICSKRSSRTEVARPYCQVKSLGSSRETSE 268 + G EP H + + Q+ N CSK+ SR + YC + S+ SE Sbjct: 591 SSNGHRHREPRHRTRDMGRDQDHNECSKQRSRHKSKDRYCDKEGEVISKRRSE 643 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,682,058 Number of Sequences: 219361 Number of extensions: 1152164 Number of successful extensions: 3466 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3389 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3463 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
