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| Clone Name | bastl30c03 |
|---|---|
| Clone Library Name | barley_pub |
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 34.3 bits (77), Expect = 0.17 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -3 Query: 213 PPRPNAISPTSTCTGPPRCTRPVYISSIHQRF 118 PP PN +PTS+ T PP P+ SIH F Sbjct: 694 PPAPNKPTPTSSSTTPPSPNLPLQFGSIHSPF 725
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 33.1 bits (74), Expect = 0.39 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +1 Query: 1 KHSSIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRAD-INRPRAAGWSCT 177 K S+P PPP P AA PG RG+ + + S EP R + + + A W T Sbjct: 23 KLESVPPPPP-SPSAAAAGAPGARGSEPR-DPGSPRGSEEPGKKRHERLFHRQDALWIST 80 Query: 178 CASGTDGIRP 207 ++GT G P Sbjct: 81 SSAGTGGAEP 90
>KLF13_MOUSE (Q9JJZ6) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Erythroid transcription factor FKLF-2) Length = 289 Score = 32.3 bits (72), Expect = 0.66 Identities = 27/74 (36%), Positives = 31/74 (41%) Frame = +1 Query: 13 IPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADINRPRAAGWSCTCASGT 192 +P PP P G P PG+ GA A S SEP + A P AG SG Sbjct: 97 LPPAPPAPPPGPEPASPGQAGAPAA---PPSPAWSEP--EAALEQEPGPAG------SGE 145 Query: 193 DGIRPRREDGRQAA 234 G+R R GR A Sbjct: 146 PGLRQRGRRGRSRA 159
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 32.0 bits (71), Expect = 0.87 Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 8/77 (10%) Frame = +1 Query: 1 KHSSIPSPPPRDPLGAAPQLPGRRGA--------RGAWQEAASQQSSEPLVDRADINRPR 156 K S+P PPP P AA PG RG+ RGA E ++ E L R D Sbjct: 23 KLESVPPPPP-SPSAAAVGAPGARGSEPRDPGSPRGA--EEPGKKRHERLFHRQD----- 74 Query: 157 AAGWSCTCASGTDGIRP 207 A W T ++G G P Sbjct: 75 -ALWISTSSAGAGGAEP 90
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 32.0 bits (71), Expect = 0.87 Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 8/77 (10%) Frame = +1 Query: 1 KHSSIPSPPPRDPLGAAPQLPGRRGA--------RGAWQEAASQQSSEPLVDRADINRPR 156 K S+P PPP P AA PG RG+ RGA E ++ E L R D Sbjct: 23 KLESVPPPPP-SPSAAAVGAPGARGSEPRDPGSPRGA--EEPGKKRHERLFHRQD----- 74 Query: 157 AAGWSCTCASGTDGIRP 207 A W T ++G G P Sbjct: 75 -ALWISTSSAGAGGAEP 90
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 32.0 bits (71), Expect = 0.87 Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 17/118 (14%) Frame = -3 Query: 450 VSSVSPKPTSAR*SLTSVFLLDVDTSSGSDLLFEV-------GSTGKTVD--DVIIQAPX 298 + S +P+ T+ +L + D +T++G V STG TV DV P Sbjct: 420 IFSKAPESTTTSPTLNTTGFADPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPA 479 Query: 297 XXXXXXXXXXXXVHNDEDGDEGRLPS-------IFPPRPNAISPTSTCTGP-PRCTRP 148 ++G E + P + P PNA SPT T P P T P Sbjct: 480 GTTSGASPVTPSPSPWDNGTESKAPDMTSSTSPVTTPTPNATSPTPAVTTPTPNATSP 537
>PRM2_PONPY (P35301) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/36 (50%), Positives = 23/36 (63%) Frame = +3 Query: 351 QTRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRRH 458 +T+G SH R +H RRR RI+ Q+ K RRRRH Sbjct: 46 RTQGHSHYRRRHCSRRRLHRIHRQQHRSCK-RRRRH 80
>CRDL1_MOUSE (Q920C1) Chordin-like protein 1 precursor (Neuralin) (Ventroptin)| Length = 447 Score = 31.2 bits (69), Expect = 1.5 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = +1 Query: 1 KHSSIPSP---PPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADINRPRAAGWS 171 +HS + SP PP G P+ PG R RGA + SQQ+S +V + IN G Sbjct: 198 RHSYLRSPYDPPPNRQAGGLPRFPGSRSHRGAVID--SQQASGTIV-QIVINNKHKHGQV 254 Query: 172 C 174 C Sbjct: 255 C 255
>LIPA3_RAT (Q91Z79) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3) Length = 1192 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 10 SIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSE 120 ++PS P DP GA GR G RG W A + S + Sbjct: 522 TLPSGAPLDPYGAG---SGRAGKRGRWSGAKDESSKD 555
>LIPA3_MOUSE (P60469) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type| f polypeptide-interacting protein alpha-3) (PTPRF-interacting protein alpha-3) Length = 1043 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 10 SIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSE 120 ++PS P DP GA GR G RG W A + S + Sbjct: 372 TLPSGAPLDPYGAG---SGRAGKRGRWSGAKDESSKD 405
>CRDL1_HUMAN (Q9BU40) Chordin-like protein 1 precursor (Neuralin) (Ventroptin)| Length = 450 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/57 (36%), Positives = 26/57 (45%) Frame = +1 Query: 4 HSSIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADINRPRAAGWSC 174 H S PPP G + PG R RGA + SQQ+S +V + IN G C Sbjct: 201 HRSHYDPPPSRQAGGLSRFPGARSHRGALMD--SQQASGTIV-QIVINNKHKHGQVC 254
>DTD_STRAW (Q82G71) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 145 Score = 30.4 bits (67), Expect = 2.5 Identities = 20/48 (41%), Positives = 25/48 (52%) Frame = +1 Query: 67 RRGARGAWQEAASQQSSEPLVDRADINRPRAAGWSCTCASGTDGIRPR 210 R+G R W AA +EPLVD + R RA G T A+G G + R Sbjct: 86 RKGRRPTWNAAAPGDVAEPLVDEV-VARLRALG--ATVATGRFGAQMR 130
>CSR2B_HUMAN (Q9H8E8) Cysteine-rich protein 2-binding protein (CSRP2-binding| protein) (CRP2BP) (CRP2-binding partner) Length = 782 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 22 PPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADIN 147 PPP + + P + GR+ RG Q +S E DR DI+ Sbjct: 386 PPPAGSVASGPVVGGRKKVRGPEQIKQEVESEEEKPDRMDID 427
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 30.0 bits (66), Expect = 3.3 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 17/118 (14%) Frame = -3 Query: 450 VSSVSPKPTSAR*SLTSVFLLDVDTSSGSDLLFEV-------GSTGKTVD--DVIIQAPX 298 + S +P+ T+ +L + +T++G V STG TV DV P Sbjct: 420 IFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPA 479 Query: 297 XXXXXXXXXXXXVHNDEDGDEGRLP-------SIFPPRPNAISPTSTCTGP-PRCTRP 148 ++G E + P ++ P PNA SPT T P P T P Sbjct: 480 GTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSP 537
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 30.0 bits (66), Expect = 3.3 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 17/118 (14%) Frame = -3 Query: 450 VSSVSPKPTSAR*SLTSVFLLDVDTSSGSDLLFEV-------GSTGKTVD--DVIIQAPX 298 + S +P+ T+ +L + +T++G V STG TV DV P Sbjct: 420 IFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPA 479 Query: 297 XXXXXXXXXXXXVHNDEDGDEGRLP-------SIFPPRPNAISPTSTCTGP-PRCTRP 148 ++G E + P ++ P PNA SPT T P P T P Sbjct: 480 GTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSP 537
>MINC_XANAC (Q8PN47) Probable septum site-determining protein minC| Length = 249 Score = 30.0 bits (66), Expect = 3.3 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = +1 Query: 10 SIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADI 144 S P PPP P A P P R A G Q A + + + D+ Sbjct: 119 SPPPPPPPPPARAEPAPPAARPAPGRMQRTAVRSGQQLYAENCDL 163
>DTD_STRCO (Q9K4F6) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 141 Score = 30.0 bits (66), Expect = 3.3 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1 Query: 67 RRGARGAWQEAASQQSSEPLVDRADINRPRAAGWSCTCASGTDGIRPR---REDGRQAAL 237 R+G R W AA +EPLVD + + RA G T A+G G + R DG L Sbjct: 82 RKGRRPTWNAAAPGDVAEPLVDEV-VAQLRALG--ATVATGRFGAQMRVSLTNDGPFTVL 138 Query: 238 VAV 246 V V Sbjct: 139 VEV 141
>VCAP_EBV (P03226) Major capsid protein (MCP)| Length = 1381 Score = 29.6 bits (65), Expect = 4.3 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1 Query: 217 DGRQAALVAVFVVVHDDHRRGVCGALRGGRLDDDVVHRLPGR-ADFKQEVGATRGI 381 DGR+ + F+VV + H+ + + LD +++H +P ++ + VGA + + Sbjct: 106 DGRRPSKQRTFIVVKNCHKHHISTEMELSMLDLEILHSIPETPVEYAEYVGAVKTV 161
>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor| Length = 1029 Score = 29.6 bits (65), Expect = 4.3 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = +1 Query: 22 PPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADINRPRAAGWSCTCASGTDGI 201 P PR P GA + PG++G+RG +A + S + D RP G+S GT G Sbjct: 481 PGPRGPQGALGE-PGKQGSRGDPGDAGPRGDSGQPGPKGDPGRP---GFSYPGPRGTPGE 536 Query: 202 R-----PRREDGR 225 + P E GR Sbjct: 537 KGEPGPPGPEGGR 549
>PRM2_PANTR (P35300) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 351 QTRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +T G SH R +H RRR RI+ Q+ + R+RR Sbjct: 46 RTHGHSHYRRRHCSRRRLRRIHRQQHRSCRRRKRR 80
>PRM2_PANPA (P35299) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 351 QTRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +T G SH R +H RRR RI+ Q+ + R+RR Sbjct: 46 RTHGHSHYRRRHCSRRRLRRIHRQQHRSCRRRKRR 80
>PRM2_MACMU (P35297) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 351 QTRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +T G SH R +H RRR RI+ ++ + RRRR Sbjct: 46 RTHGHSHYRRRHCSRRRLHRIHRRRHRSCRRRRRR 80
>PRM2_GORGO (P35313) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +3 Query: 351 QTRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +T G SH R +H RRR RI+ Q+ + R+RR Sbjct: 46 RTHGHSHYRRRHCSRRRLRRIHRQQHRSCRRRKRR 80
>PRM2_HYLLA (P35314) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 102 Score = 29.3 bits (64), Expect = 5.6 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +3 Query: 351 QTRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +T G SH R +H RRR RI+ Q+ RRRR Sbjct: 46 RTHGHSHYRRRHCSRRRLHRIHRQQHRSCGRRRRR 80
>HSP1_TRIVU (P42152) Sperm protamine P1| Length = 61 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 354 TRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +R RS RY+ RRRRSR ++ + RRRR Sbjct: 6 SRSRSRSRYRRRRRRRRSRYRSRRRRYRRSRRRR 39
>HSP1_CAEFU (P42131) Sperm protamine P1| Length = 60 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 354 TRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +R RS RY+ RRRRSR ++ + RRRR Sbjct: 6 SRSRSRSRYRRRRRRRRSRYRSRRRRYRRSRRRR 39
>EGLN2_HUMAN (Q96KS0) Egl nine homolog 2 (EC 1.14.11.-) (Hypoxia-inducible| factor prolyl hydroxylase 1) (HIF-prolyl hydroxylase 1) (HIF-PH1) (HPH-3) (Prolyl hydroxylase domain-containing protein 1) (PHD1) (Estrogen-induced tag 6) Length = 407 Score = 29.3 bits (64), Expect = 5.6 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +1 Query: 43 GAAPQLPGRRGARGAWQEAASQQSSEPLVDRADINRPRAAGWSCTCASGT 192 GA P+ P R+ A A S P + + R G SC+C+SG+ Sbjct: 111 GARPEAPKRKWAEDGGD--APSPSKRPWARQENQEAEREGGMSCSCSSGS 158
>GCSP_MYCPA (Q73ZQ6) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 941 Score = 28.9 bits (63), Expect = 7.3 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Frame = +1 Query: 187 GTDGIRP--RREDGRQAALVAVF--VVVHDDHRRGVCGALRGGRLDDDVVHRLPGRADFK 354 G +G+ RR G A+ A VVHD R D V+ R+PGRAD Sbjct: 353 GAEGLTAIARRVHGHAEAIAAALGTAVVHD-------------RYFDTVLARVPGRADEV 399 Query: 355 QEVGATRGINI 387 RGIN+ Sbjct: 400 IAAAKARGINL 410
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +1 Query: 7 SSIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLV 129 +S+P PPP D A P ++ GA + AA+ S E LV Sbjct: 45 TSVPPPPPEDAPPAPPPEKKKKVGWGAKRPAATPLSVEELV 85
>XKR6_HUMAN (Q5GH73) XK-related protein 6| Length = 641 Score = 28.9 bits (63), Expect = 7.3 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 13 IPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVD 132 IP PP +P+ AP++PG RG + A ++Q + D Sbjct: 520 IPLPPDVEPM--APEIPGYRGTQVTPTRAVTEQQEDLTAD 557
>TLX2_MOUSE (Q61663) T-cell leukemia homeobox protein 2 (Homeobox protein| Hox-11L1) (Homeobox TLX-2) (PMUR10F) Length = 284 Score = 28.9 bits (63), Expect = 7.3 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 4 HSSIPSPPPRDPLGAAPQLPGRRGARGA 87 H +P PPP GAAP +PG G GA Sbjct: 86 HRPLPVPPPS---GAAPAVPGPSGLGGA 110
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 28.9 bits (63), Expect = 7.3 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 16 PSPPPRDPLGAAPQLPGRRGARG 84 PS PPR GAAPQ P R+ G Sbjct: 397 PSTPPRASSGAAPQTPKRKKGLG 419
>XKR6_RAT (Q5GH57) XK-related protein 6| Length = 638 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 13 IPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVD 132 IP PP +P+ APQ PG RG + A ++Q + D Sbjct: 517 IPLPPDVEPM--APQTPGYRGTQVTPTRAVTEQQEDLTAD 554
>MINC_XANCP (Q8PBJ4) Probable septum site-determining protein minC| Length = 249 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = +1 Query: 10 SIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADI 144 S P PPP P A P P R A G Q A + + + D+ Sbjct: 119 SPPPPPPPPPARAEPAAPVARPAPGRMQRNAVRSGQQLYAENCDL 163
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +1 Query: 16 PSPP-PRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLV 129 P PP P+ P G PG+ GA GA + + SEPLV Sbjct: 91 PGPPGPKGPPGP----PGKAGAPGAAGQPGANAPSEPLV 125
>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase| (EC 3.1.3.16) (TFIIF-associating CTD phosphatase) Length = 961 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/48 (41%), Positives = 22/48 (45%) Frame = +1 Query: 10 SIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADINRP 153 S PSPP RDP G Q PG + G + A SE R D RP Sbjct: 353 SEPSPPVRDPEGVT-QAPGVEPSNGLEKPARELNGSEAATPR-DSPRP 398
>SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A precursor (SP-A)| (PSP-A) (PSAP) Length = 248 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%) Frame = +1 Query: 16 PSPP-PRDPLGAAPQLPGRRGARGA 87 P PP P P G P LPGR G GA Sbjct: 54 PGPPGPMGPPGGMPGLPGRDGMTGA 78
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +1 Query: 13 IPSPPPRDPLGAAPQLPGRRGARG 84 IPSPPP P AP P R RG Sbjct: 462 IPSPPPSPPPSPAPLEPSSRVGRG 485
>SFTPA_BOVIN (Q6RXL1) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)| (PSAP) (Fragment) Length = 92 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%) Frame = +1 Query: 16 PSPP-PRDPLGAAPQLPGRRGARGA 87 P PP P P G P LPGR G GA Sbjct: 30 PGPPGPMGPPGGMPGLPGRDGMTGA 54
>PROA_DESPS (Q6AK09) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 418 Score = 28.5 bits (62), Expect = 9.6 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +1 Query: 232 ALVAVFVVVHDDHRRGVCGALRGGRLDDDVV-HRLPGRADFKQEVG 366 A VA V+ R GVC AL G + +D+V LPG A E+G Sbjct: 241 AKVAPIVINAKTQRPGVCNALEGILIHEDIVADVLPGLATELAELG 286
>PRM2_HUMAN (P04554) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:| Basic nuclear protein HPI1; Basic nuclear protein HPI2; Basic nuclear protein HPS1; Basic nuclear protein HPS2; Sperm histone HP4 (Sperm protamine P4); Sperm histone HP2 (Sperm Length = 102 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +3 Query: 351 QTRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +T G+SH R +H RRR RI+ ++ + R+RR Sbjct: 46 RTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRR 80
>HSP1_PSECU (P42145) Sperm protamine P1| Length = 68 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 354 TRGRSH*RYQHPIRRRRSRINEQKLALVKPRRRR 455 +R RS RY+ RRRRSR ++ + RRRR Sbjct: 6 SRSRSRSRYRRRRRRRRSRYRGRRRRYRRSRRRR 39
>EMAL4_HUMAN (Q9HC35) Echinoderm microtubule-associated protein-like 4 (EMAP-4)| (Restrictedly overexpressed proliferation-associated protein) (Ropp 120) Length = 981 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = +1 Query: 7 SSIPSPPPRDPLGAAPQLPGRRGARGAWQEAASQQSSEPLVDRADINRPRAAG 165 S+ P+PPP PL + R + E + +Q+ EP D ++ +G Sbjct: 895 SNTPTPPPSQPLNETAEEESRISSSPTLLENSLEQTVEPSEDHSEEESEEGSG 947
>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) Length = 487 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -3 Query: 225 PSIFPPRPNAISPT--STCTGPPRCTRP 148 P + PPRP +P +T T PPR TRP Sbjct: 193 PLMMPPRPTPPTPLPPATLTVPPRPTRP 220
>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) (EBNA2) Length = 451 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%) Frame = -3 Query: 225 PSIFPPRPNAISPT--STCTGPPRCTRP 148 P + PPRP +P +T T PPR TRP Sbjct: 159 PLMMPPRPTPPTPLPPATLTVPPRPTRP 186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,020,699 Number of Sequences: 219361 Number of extensions: 1308353 Number of successful extensions: 5944 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 5171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5910 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
