Clone Information

BLAST Search Result

Clone Name	bastl30c01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit ...	107	5e-24
2	SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)	32	0.38
3	P53_MARMO (O36006) Cellular tumor antigen p53 (Tumor suppressor ...	32	0.49
4	OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-bind...	32	0.49
5	LAS17_YEAST (Q12446) Proline-rich protein LAS17	32	0.49
6	M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kina...	32	0.49
7	P53_BOVIN (P67939) Cellular tumor antigen p53 (Tumor suppressor ...	32	0.49
8	P53_BOSIN (P67938) Cellular tumor antigen p53 (Tumor suppressor ...	32	0.49
9	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	31	0.64
10	TENS1_BOVIN (Q9GLM4) Tensin-1	31	0.64
11	TF65_HUMAN (Q04206) Transcription factor p65 (Nuclear factor NF-...	31	0.84
12	NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-...	30	1.4
13	TENS1_HUMAN (Q9HBL0) Tensin-1	30	1.4
14	CSKI2_HUMAN (Q8WXE0) Caskin-2	30	1.9
15	VRP1_YEAST (P37370) Verprolin	30	1.9
16	CEA_CITFR (P04480) Colicin-A	29	2.4
17	IR14_HCMVA (P21601) Hypothetical protein IRL14	29	2.4
18	P53_SHEEP (P51664) Cellular tumor antigen p53 (Tumor suppressor ...	29	2.4
19	VG52_ICHV1 (Q00121) Hypothetical gene 52 protein	29	3.2
20	WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7...	28	4.2
21	VINEX_HUMAN (O60504) Vinexin (Sorbin and SH3 domain-containing p...	28	4.2
22	P53_SPEBE (Q64662) Cellular tumor antigen p53 (Tumor suppressor ...	28	4.2
23	HMGYB_SOYBN (Q10370) HMG-Y-related protein B (SB16B protein) (Fr...	28	4.2
24	TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)	28	4.2
25	UBQL2_HUMAN (Q9UHD9) Ubiquilin-2 (Protein linking IAP with cytos...	28	4.2
26	P53_HORSE (P79892) Cellular tumor antigen p53 (Tumor suppressor ...	28	5.5
27	GAG_SFV1 (Q00071) Gag polyprotein (Core polyprotein)	28	5.5
28	CSPG2_BOVIN (P81282) Versican core protein precursor (Large fibr...	28	5.5
29	IRS1_HCMVA (P09715) Protein IRS1 (HQRF1)	28	7.1
30	RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)	28	7.1
31	CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22	28	7.1
32	TRS1_HCMVA (P09695) Protein HHLF1	28	7.1
33	FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription fact...	28	7.1
34	RP3A_MOUSE (P47708) Rabphilin-3A (Exophilin-1)	28	7.1
35	PTN12_MOUSE (P35831) Tyrosine-protein phosphatase non-receptor t...	28	7.1
36	UN119_HUMAN (Q13432) Unc-119 protein homolog (Retinal protein 4)...	28	7.1
37	MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)	28	7.1
38	HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)	27	9.3
39	ZFP91_HUMAN (Q96JP5) Zinc finger protein 91 homolog (Zfp-91)	27	9.3
40	CC022_HUMAN (Q8N5N4) Protein C3orf22	27	9.3
41	TRC8_DROME (Q7KRW1) Protein TRC8 homolog	27	9.3
42	MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-pro...	27	9.3
43	BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO d...	27	9.3
44	TENR_HUMAN (Q92752) Tenascin-R precursor (TN-R) (Restrictin) (Ja...	27	9.3
45	NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 ...	27	9.3
46	MUTL_ECOLI (P23367) DNA mismatch repair protein mutL	27	9.3
47	RLPA_PSEAE (Q9X6V6) RlpA-like lipoprotein precursor	27	9.3
48	KCRF_STRPU (P18294) Creatine kinase, flagellar (EC 2.7.3.2)	27	9.3
49	CNTRB_HUMAN (Q8N137) Centrobin (LYST-interacting protein 8)	27	9.3
50	BAGP_DROME (P22809) Homeobox protein bagpipe (NK-3)	27	9.3
51	P53_EQUAS (Q29480) Cellular tumor antigen p53 (Tumor suppressor ...	27	9.3

>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34|
           (eIF-(iso)4F p82-34)
          Length = 788

 Score =  107 bits (268), Expect = 5e-24
 Identities = 55/71 (77%), Positives = 57/71 (80%)
 Frame = +3

Query: 156 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHFET 335
           MTTDQPVISL             LFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLH E+
Sbjct: 1   MTTDQPVISLRPGGGGGGPRGGRLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHSES 60

Query: 336 RERIRYSRDQL 368
           RER+RYSRDQL
Sbjct: 61  RERVRYSRDQL 71

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>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)|
          Length = 582

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 31/118 (26%), Positives = 41/118 (34%), Gaps = 7/118 (5%)
 Frame = +3

Query: 9   ERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQPVISLX 188
           E  Q  P PPP       S +   +SP P R P   +A  P     PS  ++     SL 
Sbjct: 30  EPQQPPPPPPPGPGAASASAAPPTASPGPERKPPPASAPAPQPAPTPSVGSSF--FSSLS 87

Query: 189 XXXXXXXXXXXXLFAPAFAVAASGSGDFL----RPHGGGAS---GVSRIGDLHFETRE 341
                       + APA A AA+     L     PH   A    G   +GD   +  +
Sbjct: 88  QAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQ 145

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>P53_MARMO (O36006) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 391

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 3   YRERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVD 113
           +R+R +  P PPPR   K+   +   SSP P++ P+D
Sbjct: 287 FRKRGEPCPEPPPRST-KRALPNGTSSSPQPKKKPLD 322

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>OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-binding|
           protein-related protein 4) (OSBP-related protein 4)
           (ORP-4)
          Length = 916

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 29/100 (29%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
 Frame = +3

Query: 12  RSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQPVISLXX 191
           + Q +P P P         S A+S   PR  PV    + P  G+G       QP   L  
Sbjct: 51  KPQPQPVPEPERGPLSEQVSEAVSEAVPRSEPVSETTSEPEPGAG-------QP-SELLQ 102

Query: 192 XXXXXXXXXXXLFAPAFAVAAS-------GSGDFLRPHGG 290
                      + A  F  AAS       GS  FLRP  G
Sbjct: 103 GSRPGSESSSGVGAGPFTKAASEPLSRAVGSATFLRPESG 142

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>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = +3

Query: 27  PNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQP 173
           P PPP   G+     SA S+P P   P   +AA P     P A  T QP
Sbjct: 470 PPPPPASLGQSQIPQSAPSAPIPPTLPSTTSAAPP----PPPAFLTQQP 514

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>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1233

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +3

Query: 12  RSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWS 137
           R   +  PPP ++  +   S     P P   P DRA  V WS
Sbjct: 498 RPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVQWS 539

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>P53_BOVIN (P67939) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 386

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 6   RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVD 113
           R++ Q+ P PPPR   K+   ++  SSP P++ P+D
Sbjct: 283 RKKGQSCPEPPPRST-KRALPTNTSSSPQPKKKPLD 317

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>P53_BOSIN (P67938) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 386

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 6   RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVD 113
           R++ Q+ P PPPR   K+   ++  SSP P++ P+D
Sbjct: 283 RKKGQSCPEPPPRST-KRALPTNTSSSPQPKKKPLD 317

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +3

Query: 15   SQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAA---VPWSGSGPSAM 158
            S TE  PP + +G  G  SS   SPAP   PV  + +    P S SGP+ +
Sbjct: 1182 SSTEAEPPTQPDGAGGGGSS--PSPAPATSPVPPSPSPVPTPASPSGPATL 1230

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>TENS1_BOVIN (Q9GLM4) Tensin-1|
          Length = 1715

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = +3

Query: 6   RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQPVISL 185
           +++ Q +P PPPR++ +   +S  +S P+P+       + +P      S    +Q + +L
Sbjct: 656 QQQQQQQPRPPPRQQERVHLESLGLSRPSPQPLAEPPMSGLPEFPRAASQQEIEQSIEAL 715

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>TF65_HUMAN (Q04206) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 551

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 21  TEPNPPPREEGKKGSDSSAISSPAPRRFP 107
           T+P PPPR        S+++  PAP+ +P
Sbjct: 322 TDPRPPPRRIAVPSRSSASVPKPAPQPYP 350

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>NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2498

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 15  SQTEPNPPPREEGKKGSDS-----SAISSPAPRRFPVDRAAAVPWSGSGPS 152
           +++ P+P P E  + G DS     S++S  AP   P   AA+ P S S PS
Sbjct: 726 TESAPSPSPAEAARLGDDSVDRTTSSVSMEAP---PEQDAASKPASDSSPS 773

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>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = +3

Query: 6   RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQPVISL 185
           +++ Q +P PPPR++ +   +S   S P+P+        ++P      S    +Q + +L
Sbjct: 653 QQQQQQQPRPPPRQQERAHLESLVASRPSPQPLAETPIPSLPEFPRAASQQEIEQSIETL 712

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>CSKI2_HUMAN (Q8WXE0) Caskin-2|
          Length = 1202

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 6    RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQP 173
            R R +  P PPP+         S++S P+P   P+D +       +GP   T  +P
Sbjct: 862  RARRKGPPPPPPKR-------LSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEP 910

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
 Frame = +3

Query: 15  SQTEPNPPPREEGKKGSDSSAISS------PAPRRFPVDRAAAVPWSGSGPSAMTTDQPV 176
           S   P PPP       S SSA+S+      P P   P   A +VP +   P  +TT++P 
Sbjct: 394 SMPAPPPPPPPPPGAFSTSSALSASSIPLAPLPPPPPPSVATSVPSAPPPPPTLTTNKPS 453

Query: 177 IS 182
            S
Sbjct: 454 AS 455

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>CEA_CITFR (P04480) Colicin-A|
          Length = 592

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 175 TGWSVVMAEGPEPDQGTAAARSTGNRRGAGEEIAEES 65
           TGWS     GPEP  G +   S G+ RG    +  ES
Sbjct: 13  TGWSSERGSGPEPG-GGSHGNSGGHDRGDSSNVGNES 48

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>IR14_HCMVA (P21601) Hypothetical protein IRL14|
          Length = 183

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 21  TEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPW 134
           ++ +P P  +G  G DS A    +PR +P   A A  W
Sbjct: 57  SQSDPLPGGDGLTGGDSKATRRTSPRYYPPSEATAGRW 94

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>P53_SHEEP (P51664) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 382

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 3   YRERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVD 113
           +R++ Q+ P PPP    K+   SS  SSP  ++ P+D
Sbjct: 278 FRKKGQSCPEPPPGST-KRALPSSTSSSPQQKKKPLD 313

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>VG52_ICHV1 (Q00121) Hypothetical gene 52 protein|
          Length = 318

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 30  NPPPREEGKKGSDSSAI-SSPAPRRFPVDRAAAV 128
           N  PR   KK   S+ + +SPA  RF V RAAA+
Sbjct: 49  NGTPRLSAKKSPSSNIVPNSPAATRFSVTRAAAI 82

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>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)|
           (Protein kinase with no lysine 1) (Protein kinase,
           lysine-deficient 1) (Kinase deficient protein)
          Length = 2382

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 18  QTEPNPPPREEGKKGSDSSAISSPAPRRF-PVDRAAAVPWSGSGPSAMTTDQPV 176
           Q+ P  P REE    + +S ++   P    P ++A A P   + PS+ + D+PV
Sbjct: 113 QSAPPEPHREETVTATATSQVAQQPPAAAAPGEQAVAGPAPSTVPSSTSKDRPV 166

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>VINEX_HUMAN (O60504) Vinexin (Sorbin and SH3 domain-containing protein 3)|
           (SH3-containing adapter molecule 1) (SCAM-1)
          Length = 671

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +3

Query: 81  SSPAPRRFPVDRAAAVP---WSGSGPSA 155
           SSPAPRR P  R  A P   WS S P A
Sbjct: 302 SSPAPRRAPEQRPPAGPASAWSSSYPHA 329

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>P53_SPEBE (Q64662) Cellular tumor antigen p53 (Tumor suppressor p53)|
           (Fragment)
          Length = 314

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 3   YRERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVD 113
           +R+R +  P PPP    K+   +   SSP P++ P+D
Sbjct: 267 FRKRGEPCPEPPPGST-KRALPTGTNSSPQPKKKPLD 302

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>HMGYB_SOYBN (Q10370) HMG-Y-related protein B (SB16B protein) (Fragment)|
          Length = 152

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +3

Query: 6   RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQP 173
           R R   +PN PP+    K   + A   P  R   V R+ AVP     P+A++T +P
Sbjct: 85  RGRPPKDPNAPPK--SPKAKATPATGRPRGRPKKVARSPAVP----SPTAVSTGRP 134

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>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)|
          Length = 518

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +3

Query: 21  TEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSA 155
           +EP P P  EG+    +   + PA    P    A  P  G+ P A
Sbjct: 400 SEPEPVPAAEGEAAPAAEGAAPPAEGAAPPAEGAVPPADGAAPPA 444

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>UBQL2_HUMAN (Q9UHD9) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)|
           (PLIC-2) (hPLIC-2) (Ubiquitin-like product Chap1/Dsk2)
           (DSK2 homolog) (Chap1)
          Length = 624

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/55 (34%), Positives = 22/55 (40%)
 Frame = +3

Query: 21  TEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQPVISL 185
           T P  PP   G  G     +SS APR          P S SGP+     Q V +L
Sbjct: 519 TGPAAPPGSTGSGGPTGPTVSSAAPRE------TTSPTSESGPNQQFIQQMVQAL 567

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>P53_HORSE (P79892) Cellular tumor antigen p53 (Tumor suppressor p53)|
           (Fragment)
          Length = 280

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 3   YRERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVD 113
           +R++ +  P PPPR   K+   S+  SSP  ++ P+D
Sbjct: 240 FRKKEEPCPEPPPRST-KRVLSSNTSSSPPQKKKPLD 275

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>GAG_SFV1 (Q00071) Gag polyprotein (Core polyprotein)|
          Length = 647

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 21  TEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAA-VPWSGSGPSAMTTD 167
           T P PPP  + +  + SS   +PAP       AAA + W   GP   + D
Sbjct: 183 TPPPPPPSLDLQPAAASSPYVAPAPSAPAASAAAADLGWFAGGPGPGSLD 232

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>CSPG2_BOVIN (P81282) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M) (Glial hyaluronate-binding protein)
            (GHAP)
          Length = 3381

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 15   SQTEPNPPPREEGKKGSDSSAISSPAP 95
            S T+P  PP  EGK+     A S+P P
Sbjct: 1287 STTQPTRPPTVEGKEAFGPQAFSTPEP 1313

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>IRS1_HCMVA (P09715) Protein IRS1 (HQRF1)|
          Length = 846

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 9   ERSQTEPNPPPREEGK-KGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQP 173
           +R+   P PPP   G+  G  S   SSP     P+    A   +G+G SA  T  P
Sbjct: 3   QRNGMSPRPPPLGRGRGAGGPSGVGSSPPSSCVPM---GAPSTAGTGASAAATTTP 55

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>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)|
          Length = 684

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 27  PNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAM 158
           P+P P +  + G    + ++P P RFP     A P     P A+
Sbjct: 286 PSPAPPQPVQPGPPGGSRAAPGPGRFPEQSTEAPPSDPGYPGAV 329

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>CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22|
          Length = 831

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 27  PNPPPREEGKKGSDSSAISSPAPRR 101
           P+PPPR   ++ SD+S   SP PRR
Sbjct: 808 PSPPPRR--RRYSDNSRSPSPPPRR 830



 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 27  PNPPPREEGKKGSDSSAISSPAPRR 101
           P+PPPR   ++ SD S   SP PRR
Sbjct: 746 PSPPPRR--RRYSDDSRSPSPPPRR 768

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>TRS1_HCMVA (P09695) Protein HHLF1|
          Length = 788

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +3

Query: 9   ERSQTEPNPPPREEGK-KGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQP 173
           +R+   P PPP   G+  G  S   SSP     P+    A   +G+G SA  T  P
Sbjct: 3   QRNGMSPRPPPLGRGRGAGGPSGVGSSPPSSCVPM---GAPSTAGTGASAAATTTP 55

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>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix|
           nude)
          Length = 648

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 234 PAFAVAASGSGDFLRPHGGGASGVSRIGDLHFET 335
           P      SG+GD   P  GG+     +GDLH  T
Sbjct: 585 PCLTETGSGAGDLAAPGSGGSGA---LGDLHLTT 615

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>RP3A_MOUSE (P47708) Rabphilin-3A (Exophilin-1)|
          Length = 681

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 27  PNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAM 158
           P+P P +  + G    + ++P P RFP     A P     P A+
Sbjct: 283 PSPAPPQPVQPGPPGGSRATPGPGRFPEQSTEAPPSDPGYPGAV 326

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>PTN12_MOUSE (P35831) Tyrosine-protein phosphatase non-receptor type 12 (EC|
           3.1.3.48) (Protein-tyrosine phosphatase P19) (P19-PTP)
           (MPTP-PEST)
          Length = 775

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 48  EGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMT 161
           E  + S S++ + P P   P+D+   V WS  GP   T
Sbjct: 508 ESSEESQSNSHTPPRPDCLPLDKKGHVTWSLHGPENAT 545

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>UN119_HUMAN (Q13432) Unc-119 protein homolog (Retinal protein 4) (HRG4)|
          Length = 240

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 27  PNPPPREEGKKGSDSSAISSPAPRRFPVDR 116
           P P P  E + GS+S   + P PR  P+ R
Sbjct: 27  PIPQPPAESESGSESEPDAGPGPRPGPLQR 56

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>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)|
          Length = 2567

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 6   RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDR 116
           R R + +  P P+EEGK G    +  +P  R +  ++
Sbjct: 479 RIRKENQDGPAPQEEGKGGQSRDSDQAPEDRWYEAEK 515

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>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)|
          Length = 176

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 6   RERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVP 131
           R R   +PN PP+    K +  S      P++ P   A A P
Sbjct: 109 RGRPPKDPNAPPKSPKAKATPGSGRPRGRPKKVPRSPAVAAP 150

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>ZFP91_HUMAN (Q96JP5) Zinc finger protein 91 homolog (Zfp-91)|
          Length = 570

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +3

Query: 18  QTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVP 131
           +TE   PP ++ ++G +++  +   P++ P +  AA P
Sbjct: 4   ETEEPRPPEQQDQEGGEAAKAAPEEPQQRPPEAVAAAP 41

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>CC022_HUMAN (Q8N5N4) Protein C3orf22|
          Length = 141

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 3   YRERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTT 164
           YR    TEP+P P +  +  +DS+ +  P  +R    R  ++P  G G    T+
Sbjct: 29  YRLSWLTEPDPEPLQPWEVTNDSNTVQLPLQKRLVPTR--SIPVRGLGAPDFTS 80

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>TRC8_DROME (Q7KRW1) Protein TRC8 homolog|
          Length = 809

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
 Frame = +3

Query: 18  QTEPNP------PPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQPVI 179
           + EP P      P R   +  ++++A    +P R PV+ +   P + S  +A T     +
Sbjct: 674 EAEPAPAAQAEQPMRIYPRDDANNAAAQRRSPERAPVEASEQAPATSSSSAAATIGAEAV 733

Query: 180 SLXXXXXXXXXXXXXLFAPAFA------VAASGSGD 269
           S              L + A +      ++ASGS D
Sbjct: 734 SAIVESAAAVGEARSLVSVASSSSATHRISASGSSD 769

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>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2|
           (EC 2.7.11.1)
          Length = 1798

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +3

Query: 6   RERSQTEPNPPP---REEGKKGSDSSAISSPAPRRFPVDRAAAVPWSG-SGPSAMTTD 167
           R R +  P PPP   RE+G + +   + S P  RR P  R      +G +GP     D
Sbjct: 3   RSRCRDRPQPPPPDRREDGVQRAAELSQSLPPRRRAPPGRQRLEERTGPAGPEGKEQD 60

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>BRO1_EMENI (Q6XPR4) Vacuolar protein-sorting protein bro1 (BRO|
           domain-containing protein 1)
          Length = 1000

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 9   ERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQPVI 179
           ER  TEP PP    G   +  +   SP P   PV +A A P + + P A     P +
Sbjct: 788 ERLSTEPKPPSVPPGSSTAGPAKAKSPPP---PV-KAPAYPTNIAPPKASPHFAPTV 840

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>TENR_HUMAN (Q92752) Tenascin-R precursor (TN-R) (Restrictin) (Janusin)|
          Length = 1358

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 12  RSQTEPNPPPREEGKKGSDSSAISSPAPRRFP--VDRAAAVPWSGSGPSAMT 161
           R Q E      EEG +G D SA++ P   R     DR+  + W   GP A+T
Sbjct: 304 RGQCEEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEW--DGPMAVT 353

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>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)|
           (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar
           and coiled-body phosphoprotein 1)
          Length = 704

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 15  SQTEPNPPPREEGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSAMTTDQ 170
           S+ E   PP+   KK +  +A+  P     PV +AAA   S S  S  ++++
Sbjct: 487 SEEEKKTPPKPPAKKKAAGAAVPKPT----PVKKAAAESSSSSSSSEDSSEE 534

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>MUTL_ECOLI (P23367) DNA mismatch repair protein mutL|
          Length = 615

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 24  EPNPPPRE--EGKKGSDSSAISSPAPRRFPVDRAAAVPWSGSGPSA 155
           EP P PR   E +  +  +  + PA R     R    P SGS P+A
Sbjct: 343 EPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAA 388

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>RLPA_PSEAE (Q9X6V6) RlpA-like lipoprotein precursor|
          Length = 342

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
 Frame = +3

Query: 234 PAFAVAASGSGDFLRPHGGGAS----GVSRIGD 320
           PA     SG GD+ RPH  GA      VSRI D
Sbjct: 35  PARQAGISGPGDYSRPHRDGAPWWDVDVSRIPD 67

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>KCRF_STRPU (P18294) Creatine kinase, flagellar (EC 2.7.3.2)|
          Length = 1174

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 145 PEPDQGTAAARSTGNRRGAGEEIAEESEPF 56
           P P      A +     GA EE+ +ESEPF
Sbjct: 25  PAPANNNPNAANKAETTGAAEELTKESEPF 54

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>CNTRB_HUMAN (Q8N137) Centrobin (LYST-interacting protein 8)|
          Length = 903

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 74  RDFLPGAPPIPCRSS 118
           RD LPGAPP+ C SS
Sbjct: 620 RDELPGAPPVLCSSS 634

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>BAGP_DROME (P22809) Homeobox protein bagpipe (NK-3)|
          Length = 382

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 3   YRERSQTEPNPPPREEGKKGSDSSAISSPAPRRFP 107
           Y +    +P PPP +     + SSA SSP P   P
Sbjct: 307 YPQHKVPQPIPPPTQSSSFVTASSASSSPVPIPIP 341

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>P53_EQUAS (Q29480) Cellular tumor antigen p53 (Tumor suppressor p53)|
           (Fragment)
          Length = 207

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 3   YRERSQTEPNPPPREEGKKGSDSSAISSPAPRRFPVD 113
           +R++ +  P PPPR   K+   S+  SSP  +  P+D
Sbjct: 165 FRKKEEPCPEPPPRST-KRVLSSNTSSSPPQKEDPLD 200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,481,136
Number of Sequences: 219361
Number of extensions: 614726
Number of successful extensions: 3678
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3643
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result