ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30c01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA, complete cds Length = 2887 Score = 238 bits (120), Expect = 1e-59 Identities = 141/148 (95%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 281 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 150 cgcctcttcgcccccgccttcgcggtcgccgcctccggctccggcgacttcctccgcccg 209 Query: 282 cacggtggcggagcctccggcgtctccaggattggtgacttgcattttgagacacgtgag 341 ||||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 210 cacggcggcggcgcctccggcgtctccaggattggtgacttgcattctgagtcacgtgag 269 Query: 342 cgtattcgttattcaagagatcaacttc 369 ||| |||||||||||||||||||||||| Sbjct: 270 cgtgttcgttattcaagagatcaacttc 297 Score = 184 bits (93), Expect = 1e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 73 ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 132 |||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1 ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60 Query: 133 ggtcgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgcc 189 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgcc 117
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 Score = 184 bits (93), Expect = 1e-43 Identities = 111/117 (94%) Strand = Plus / Plus Query: 73 ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 132 |||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1 ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60 Query: 133 ggtcgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgcc 189 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgcc 117 Score = 155 bits (78), Expect = 1e-34 Identities = 135/149 (90%), Gaps = 5/149 (3%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 281 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 150 cgcctcttcgcccccgccttcgcggtcgccgcctccggctccggcgacttcctccgcccg 209 Query: 282 cacggtggcggagcc-tccggcgtctccaggattggtgacttgcattttgagacacgtga 340 ||||| ||||| ||| ||||| ||||||||||||||| |||||| | |||| ||| || Sbjct: 210 cacggcggcggcgccttccgggctctccaggattggtg-cttgca-tctgagtcac--ga 265 Query: 341 gcgtattcgttattcaagagatcaacttc 369 |||| |||||||||||||||||||||||| Sbjct: 266 gcgtgttcgttattcaagagatcaacttc 294
>ref|XM_473052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2382 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 70 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 126
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 47821 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 47765
>gb|AY224450.1| Oryza sativa (japonica cultivar-group) isolate 23225 eukaryotic initiation factor-like protein mRNA, complete cds Length = 2379 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 70 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 126
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 24927236 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 24927180
>emb|AM156961.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Tog5672 Length = 2558 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 183 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 239
>emb|AM156960.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Tog5673 Length = 2533 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 183 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 239
>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Tog5681 Length = 2699 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 183 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 239
>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Gigante Length = 2599 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 80 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 136
>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar IR64 Length = 2599 Score = 81.8 bits (41), Expect = 1e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 222 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 73 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 129
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 77.8 bits (39), Expect = 2e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 232 cccccgccttcgccgtcgccgcctccggctccggcgacttcctccgc 278 ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 55312 cccccgccttcgccgccgccgcctccggctccggcgacttgctccgc 55266
>gb|AY109824.1| Zea mays CL533_1 mRNA sequence Length = 2894 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 324 cattttgagacacgtgagcgtattcgttattcaagagatcaacttc 369 ||||||||| ||||||||||| |||| || ||||||||||||||| Sbjct: 323 cattttgagccacgtgagcgtgttcgatacacaagagatcaacttc 368
>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full insert sequence Length = 2907 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 250 ccgcctccggctccggcgacttcctccgc 278 |||||||||||||||||||||| |||||| Sbjct: 139 ccgcctccggctccggcgacttgctccgc 167
>ref|XM_483376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 240 ttcgccgtcgccgcctccggctccggcg 267 |||||||||||||||||||||| ||||| Sbjct: 1859 ttcgccgtcgccgcctccggctgcggcg 1832
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 ttcgccgtcgccgcctccggctccggcg 267 |||||||||||||||||||||| ||||| Sbjct: 25924211 ttcgccgtcgccgcctccggctgcggcg 25924238
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 231 gcccccgccttcgccgtcgccgcctccg 258 |||| ||||||||||||||||||||||| Sbjct: 7733336 gccctcgccttcgccgtcgccgcctccg 7733363 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 1981064 ccgccttcgccgtcgccgcc 1981045
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 ttcgccgtcgccgcctccggctccggcg 267 |||||||||||||||||||||| ||||| Sbjct: 109998 ttcgccgtcgccgcctccggctgcggcg 110025
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 ttcgccgtcgccgcctccggctccggcg 267 |||||||||||||||||||||| ||||| Sbjct: 9088 ttcgccgtcgccgcctccggctgcggcg 9115
>dbj|AK121158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L12, full insert sequence Length = 2595 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Minus Query: 240 ttcgccgtcgccgcctccggctccggcg 267 |||||||||||||||||||||| ||||| Sbjct: 2020 ttcgccgtcgccgcctccggctgcggcg 1993
>ref|XM_466679.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2486 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 266 cgacttcctccgcccgcacggtggcggagcctccggc 302 ||||||||||||||||| ||| |||| | |||||||| Sbjct: 169 cgacttcctccgcccgcgcggcggcgcatcctccggc 205
>gb|AY022671.1| Oryza sativa microsatellite MRG4996 containing (CCG)X8, closest to marker C421, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 cgccgtcgccgcctccggctccggc 266 ||||| ||||||||||||||||||| Sbjct: 114 cgccgccgccgcctccggctccggc 138
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ccttcgccgtcgccgcctccg 258 ||||||||||||||||||||| Sbjct: 6218024 ccttcgccgtcgccgcctccg 6218004 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcgccgtcgccgcctccggctccg 264 |||||||||||||||||| ||||| Sbjct: 3869098 tcgccgtcgccgcctccgcctccg 3869121 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcgccgtcgccgcctccggctccg 264 |||||||||||||||||| ||||| Sbjct: 3831042 tcgccgtcgccgcctccgcctccg 3831065
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 266 cgacttcctccgcccgcacggtggcggagcctccggc 302 ||||||||||||||||| ||| |||| | |||||||| Sbjct: 24093957 cgacttcctccgcccgcgcggcggcgcatcctccggc 24093921 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccggc 266 ||||| ||||||||||||||||||| Sbjct: 4208607 cgccgccgccgcctccggctccggc 4208583 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gccgtcgccgcctccggctccggc 266 |||| ||||||||||||||||||| Sbjct: 33493867 gccgccgccgcctccggctccggc 33493890 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 cgccttcgccgtcgccgcctccggctcc 263 |||||||||||||||| ||||| ||||| Sbjct: 21970598 cgccttcgccgtcgccacctcccgctcc 21970625
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccggc 266 ||||| ||||||||||||||||||| Sbjct: 25421 cgccgccgccgcctccggctccggc 25397
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ccttcgccgtcgccgcctccg 258 ||||||||||||||||||||| Sbjct: 131843 ccttcgccgtcgccgcctccg 131823
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ccttcgccgtcgccgcctccg 258 ||||||||||||||||||||| Sbjct: 12100 ccttcgccgtcgccgcctccg 12080
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 266 cgacttcctccgcccgcacggtggcggagcctccggc 302 ||||||||||||||||| ||| |||| | |||||||| Sbjct: 52698 cgacttcctccgcccgcgcggcggcgcatcctccggc 52662
>dbj|AK072083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118N03, full insert sequence Length = 3014 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 266 cgacttcctccgcccgcacggtggcggagcctccggc 302 ||||||||||||||||| ||| |||| | |||||||| Sbjct: 169 cgacttcctccgcccgcgcggcggcgcatcctccggc 205
>dbj|AK063324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H05, full insert sequence Length = 1808 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ccttcgccgtcgccgcctccg 258 ||||||||||||||||||||| Sbjct: 1458 ccttcgccgtcgccgcctccg 1438
>ref|XM_468176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3248 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gccgtcgccgcctccggctccggc 266 |||| ||||||||||||||||||| Sbjct: 2628 gccgccgccgcctccggctccggc 2651
>ref|XM_466368.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1679 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 cgccttcgccgtcgccgcctccggctcc 263 |||||||||||||||| ||||| ||||| Sbjct: 378 cgccttcgccgtcgccacctcccgctcc 351
>ref|NM_197184.1| Oryza sativa (japonica cultivar-group) putative epoxide hydrolase (OSJNBa0017E08.12), mRNA Length = 957 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 243 cgccgcctccggctccggcg 224
>ref|NM_197186.1| Oryza sativa (japonica cultivar-group) putative epoxide hydrolase (OSJNBa0017E08.2), mRNA Length = 972 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 258 cgccgcctccggctccggcg 239
>ref|NM_197185.1| Oryza sativa (japonica cultivar-group) putative epoxide hydrolase (OSJNBa0017E08.11), mRNA Length = 864 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 245 cgccgcctccggctccggcg 226
>ref|NM_196634.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0019M20.6), mRNA Length = 996 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 cgccgtcgccgcctccggctccggcgac 269 ||||||||||||||||| | |||||||| Sbjct: 129 cgccgtcgccgcctccgccgccggcgac 156
>ref|NM_191743.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 948 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ccgcacggtggcggagcctccggc 302 |||||||||||||| ||||||||| Sbjct: 334 ccgcacggtggcggcgcctccggc 357
>gb|AY023280.1| Oryza sativa microsatellite MRG5605 containing (GGC)X8, closest to marker C185, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 177 ccgccttcgccgtcgccgcc 158 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 153 ccgccttcgccgtcgccgcc 134
>gb|AY390355.1| Triticum aestivum ammonium transporter (AMT1) mRNA, complete cds Length = 1852 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gccttcgccgtcgccgcctccggc 260 |||||||||||||||||| ||||| Sbjct: 423 gccttcgccgtcgccgccgccggc 446
>ref|NM_008242.1| Mus musculus forkhead box D1 (Foxd1), mRNA Length = 2437 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 699 cgccgcctccggctccggcg 680
>gb|BC021786.1| Mus musculus integral membrane protein 2B, mRNA (cDNA clone MGC:27534 IMAGE:4458918), complete cds Length = 1132 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 111 ccccagccttcgccgtcgccgcct 134
>gb|BC004731.1| Mus musculus integral membrane protein 2B, mRNA (cDNA clone MGC:6390 IMAGE:3583154), complete cds Length = 1577 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 73 ccccagccttcgccgtcgccgcct 96
>ref|NM_008410.1| Mus musculus integral membrane protein 2B (Itm2b), mRNA Length = 1790 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 102 ccccagccttcgccgtcgccgcct 125
>gb|AY100692.1| Oryza sativa (japonica cultivar-group) alpha expansin 26 (EXPA26) mRNA, complete cds Length = 1011 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 180 ccgccttcgccgtcgccgcc 161 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 156 ccgccttcgccgtcgccgcc 137
>gb|AF394561.1| Oryza sativa alpha-expansin OsEXPA26 (EXPA26) gene, complete cds Length = 6312 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 4101 ccgccttcgccgtcgccgcc 4082 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 4077 ccgccttcgccgtcgccgcc 4058
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccgg 265 ||||||||||||||||||| |||| Sbjct: 7140053 cgccgtcgccgcctccggcgccgg 7140030 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcgccgtcgccgcctccg 258 |||||||||||||||||||| Sbjct: 5675760 cttcgccgtcgccgcctccg 5675779
>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence Length = 236220 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 186930 ccccagccttcgccgtcgccgcct 186953
>gb|AC004912.2| Homo sapiens PAC clone RP5-871B15 from 7, complete sequence Length = 157321 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccgg 265 ||||| |||||||||||||||||| Sbjct: 2098 cgccgccgccgcctccggctccgg 2075
>gb|BC064434.1| Mus musculus cDNA clone IMAGE:5031911, **** WARNING: chimeric clone **** Length = 2235 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 580 ccccagccttcgccgtcgccgcct 603
>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence Length = 147107 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gacagaccagccagtgatca 180 |||||||||||||||||||| Sbjct: 15395 gacagaccagccagtgatca 15376
>ref|XM_965221.1| PREDICTED: Tribolium castaneum similar to Guanine nucleotide-releasing protein (GNRP) (Ras-specific nucleotide exchange factor CDC25) (CDC25Mm) (LOC658869), mRNA Length = 4197 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 235 ccgccttcgccgtcgccgcctccggctc 262 ||||||||||| ||||| |||||||||| Sbjct: 3041 ccgccttcgccatcgccacctccggctc 3068
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tcgccgtcgccgcctccggc 260 |||||||||||||||||||| Sbjct: 287728 tcgccgtcgccgcctccggc 287747
>gb|BC010320.1| Mus musculus integral membrane protein 2B, mRNA (cDNA clone MGC:11918 IMAGE:3599190), complete cds Length = 1125 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 105 ccccagccttcgccgtcgccgcct 128
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 23462 cgccgcctccggctccggcg 23481 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 20041 cgccgcctccggctccggcg 20060 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 16339 cgccgcctccggctccggcg 16358
>gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, complete sequence Length = 142102 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gacagaccagccagtgatca 180 |||||||||||||||||||| Sbjct: 106152 gacagaccagccagtgatca 106133
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccggcgac 269 ||||||||||||||||| | |||||||| Sbjct: 70430 cgccgtcgccgcctccgccgccggcgac 70403
>tpg|BK005062.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 59 (WRKY59) gene, complete cds Length = 1422 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ccgcacggtggcggagcctccggc 302 |||||||||||||| ||||||||| Sbjct: 127 ccgcacggtggcggcgcctccggc 150
>tpg|BK005029.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 26 (WRKY26) gene, complete cds Length = 1682 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ccgcacggtggcggagcctccggc 302 |||||||||||||| ||||||||| Sbjct: 118 ccgcacggtggcggcgcctccggc 141
>dbj|AK152983.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830097L09 product:integral membrane protein 2B, full insert sequence Length = 1782 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 114 ccccagccttcgccgtcgccgcct 137
>dbj|AK152068.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830047A14 product:integral membrane protein 2B, full insert sequence Length = 1778 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 110 ccccagccttcgccgtcgccgcct 133
>dbj|AK151889.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830041O04 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK151714.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830034P08 product:integral membrane protein 2B, full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK159426.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019N09 product:integral membrane protein 2B, full insert sequence Length = 1758 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159378.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019A05 product:integral membrane protein 2B, full insert sequence Length = 1611 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK159340.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420016M09 product:integral membrane protein 2B, full insert sequence Length = 1580 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159307.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420015F05 product:integral membrane protein 2B, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 65 ccccagccttcgccgtcgccgcct 88
>dbj|AK152731.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083F02 product:integral membrane protein 2B, full insert sequence Length = 1588 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 93 ccccagccttcgccgtcgccgcct 116
>dbj|AK152650.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081M10 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK152516.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830077N12 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK150396.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006K20 product:integral membrane protein 2B, full insert sequence Length = 1611 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK150378.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006A16 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK160101.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420048O12 product:integral membrane protein 2B, full insert sequence Length = 1758 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cttcgccgtcgccgcctccg 258 |||||||||||||||||||| Sbjct: 155411 cttcgccgtcgccgcctccg 155392
>dbj|AK159962.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041C04 product:integral membrane protein 2B, full insert sequence Length = 1761 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 93 ccccagccttcgccgtcgccgcct 116
>dbj|AK160725.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010095A11 product:integral membrane protein 2B, full insert sequence Length = 1786 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK159792.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420031F04 product:integral membrane protein 2B, full insert sequence Length = 1580 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159628.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420026C05 product:integral membrane protein 2B, full insert sequence Length = 1095 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159619.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025M06 product:integral membrane protein 2B, full insert sequence Length = 1604 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 114 ccccagccttcgccgtcgccgcct 137
>dbj|AK003587.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110008K10 product:integral membrane protein 2B, full insert sequence Length = 1096 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 91 ccccagccttcgccgtcgccgcct 114
>dbj|AK003224.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110001H20 product:integral membrane protein 2B, full insert sequence Length = 1074 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 69 ccccagccttcgccgtcgccgcct 92
>dbj|AK077482.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730420C10 product:integral membrane protein 2B, full insert sequence Length = 1109 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 104 ccccagccttcgccgtcgccgcct 127
>dbj|AK088270.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430009G24 product:integral membrane protein 2B, full insert sequence Length = 1583 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK002599.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610012F24 product:integral membrane protein 2B, full insert sequence Length = 1070 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 65 ccccagccttcgccgtcgccgcct 88
>dbj|AK005125.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500002O14 product:integral membrane protein 2B, full insert sequence Length = 1583 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 93 ccccagccttcgccgtcgccgcct 116
>dbj|AK076139.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900026F24 product:integral membrane protein 2B, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 111 ccccagccttcgccgtcgccgcct 134
>dbj|AK003928.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110025O13 product:integral membrane protein 2B, full insert sequence Length = 1095 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 22123379 ccgccttcgccgtcgccgcc 22123360 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 22123355 ccgccttcgccgtcgccgcc 22123336
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 18490354 cgccgcctccggctccggcg 18490335 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 18486652 cgccgcctccggctccggcg 18486633 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 18483231 cgccgcctccggctccggcg 18483212 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccggcgac 269 ||||||||||||||||| | |||||||| Sbjct: 14890652 cgccgtcgccgcctccgccgccggcgac 14890625
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccgg 265 ||||||||||||||||||| |||| Sbjct: 7137948 cgccgtcgccgcctccggcgccgg 7137925 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcgccgtcgccgcctccg 258 |||||||||||||||||||| Sbjct: 5674973 cttcgccgtcgccgcctccg 5674992
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ccgcacggtggcggagcctccggc 302 |||||||||||||| ||||||||| Sbjct: 29716165 ccgcacggtggcggcgcctccggc 29716142
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ccgcacggtggcggagcctccggc 302 |||||||||||||| ||||||||| Sbjct: 45896 ccgcacggtggcggcgcctccggc 45873
>gb|AE004625.1| Pseudomonas aeruginosa PAO1, section 186 of 529 of the complete genome Length = 11871 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcgccgcctccggctccggc 266 |||||||||||||||||||| Sbjct: 6407 tcgccgcctccggctccggc 6388
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 cgccgtcgccgcctccggctccgg 265 ||||||||||||||||||| |||| Sbjct: 54285 cgccgtcgccgcctccggcgccgg 54308
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcgccgtcgccgcctccg 258 |||||||||||||||||||| Sbjct: 139459 cttcgccgtcgccgcctccg 139478
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 cgccttcgccgtcgccgcctccggctcc 263 |||||||||||||||| ||||| ||||| Sbjct: 19220 cgccttcgccgtcgccacctcccgctcc 19247
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcgccgtcgccgcctccggctccg 264 |||||||||||||||||| ||||| Sbjct: 127052 tcgccgtcgccgcctccgcctccg 127075 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcgccgtcgccgcctccggctccg 264 |||||||||||||||||| ||||| Sbjct: 88996 tcgccgtcgccgcctccgcctccg 89019
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gccgtcgccgcctccggctccggc 266 |||| ||||||||||||||||||| Sbjct: 68742 gccgccgccgcctccggctccggc 68765
>dbj|AK120570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134D09, full insert sequence Length = 1353 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 293 cgccgcctccggctccggcg 274
>dbj|AK108555.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E10, full insert sequence Length = 1193 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ccgcacggtggcggagcctccggc 302 |||||||||||||| ||||||||| Sbjct: 158 ccgcacggtggcggcgcctccggc 181
>dbj|AK106265.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F12, full insert sequence Length = 1573 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 cgccgtcgccgcctccggctccggcgac 269 ||||||||||||||||| | |||||||| Sbjct: 515 cgccgtcgccgcctccgccgccggcgac 542
>dbj|AK102182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M11, full insert sequence Length = 1678 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 cgccttcgccgtcgccgcctccggctcc 263 |||||||||||||||| ||||| ||||| Sbjct: 378 cgccttcgccgtcgccacctcccgctcc 351
>gb|AC154718.2| Mus musculus BAC clone RP24-370G12 from 14, complete sequence Length = 182043 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 171384 ccccagccttcgccgtcgccgcct 171361
>emb|AJ330169.1|HSA330169 Homo sapiens genomic sequence surrounding NotI site, clone HSJ6-AH12RS Length = 694 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 46 ccgccttcgccgtcgccgcc 27
>dbj|AK072337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H01, full insert sequence Length = 3406 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gccgtcgccgcctccggctccggc 266 |||| ||||||||||||||||||| Sbjct: 2786 gccgccgccgcctccggctccggc 2809
>dbj|AK072305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A13, full insert sequence Length = 1527 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 cgccgtcgccgcctccggctccggcgac 269 ||||||||||||||||| | |||||||| Sbjct: 478 cgccgtcgccgcctccgccgccggcgac 505
>dbj|AK071978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I16, full insert sequence Length = 3248 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 gccgtcgccgcctccggctccggc 266 |||| ||||||||||||||||||| Sbjct: 2627 gccgccgccgcctccggctccggc 2650
>dbj|AK071328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087C24, full insert sequence Length = 1175 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 199 ccgccttcgccgtcgccgcc 180 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 175 ccgccttcgccgtcgccgcc 156
>dbj|AK060338.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C11, full insert sequence Length = 1182 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 327 cgccgcctccggctccggcg 308
>dbj|AK059984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G05, full insert sequence Length = 1077 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcgccgtcgccgcctccggctccg 264 |||||||||||||||||| ||||| Sbjct: 33 tcgccgtcgccgcctccgcctccg 56
>dbj|AK059829.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H12, full insert sequence Length = 1092 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcgccgtcgccgcctccg 258 |||||||||||||||||||| Sbjct: 76 cttcgccgtcgccgcctccg 95
>dbj|AK059733.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H06, full insert sequence Length = 1250 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 308 cgccgcctccggctccggcg 289
>dbj|AK059099.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C08, full insert sequence Length = 1256 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 327 cgccgcctccggctccggcg 308
>dbj|AB059642.1| Perilla frutescens mRNA for putative regulatory protein in anthocyanin biosynthesis, complete cds Length = 1410 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ctccggcgacttcctccgcc 279 |||||||||||||||||||| Sbjct: 317 ctccggcgacttcctccgcc 336
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ttgcccccgccttcgccgtcgccg 252 |||||| ||||||||||||||||| Sbjct: 1991866 ttgccctcgccttcgccgtcgccg 1991889
>gb|U76253.1|MMU76253 Mus musculus E25B protein mRNA, complete cds Length = 1790 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 102 ccccagccttcgccgtcgccgcct 125
>gb|L38607.1|MUSBF2TF Mus musculus (clones 1 and 5) transcription factor (BF-2) mRNA, complete cds Length = 2437 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 699 cgccgcctccggctccggcg 680
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 18500407 cgccgcctccggctccggcg 18500388 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 18496705 cgccgcctccggctccggcg 18496686 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cgccgcctccggctccggcg 267 |||||||||||||||||||| Sbjct: 18493284 cgccgcctccggctccggcg 18493265 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 cgccgtcgccgcctccggctccggcgac 269 ||||||||||||||||| | |||||||| Sbjct: 14898893 cgccgtcgccgcctccgccgccggcgac 14898866
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 22051724 ccgccttcgccgtcgccgcc 22051705 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 22051700 ccgccttcgccgtcgccgcc 22051681
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 129655 ccgccttcgccgtcgccgcc 129674 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ccgccttcgccgtcgccgcc 254 |||||||||||||||||||| Sbjct: 129631 ccgccttcgccgtcgccgcc 129650
>gb|AY870609.1| Oryza sativa (japonica cultivar-group) WRKY26 mRNA, complete cds Length = 931 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ccgcacggtggcggagcctccggc 302 |||||||||||||| ||||||||| Sbjct: 134 ccgcacggtggcggcgcctccggc 157
>dbj|AB030203.1| Mus musculus mRNA for E25B protein, complete cds, clone:2-76 Length = 1622 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cccccgccttcgccgtcgccgcct 255 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AB026560.1| Oryza sativa (japonica cultivar-group) OsPAC1 mRNA for alpha 3 subunit of 20S proteasome, complete cds Length = 999 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcgccgtcgccgcctccggctccg 264 |||||||||||||||||| ||||| Sbjct: 36 tcgccgtcgccgcctccgcctccg 59 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,806,574 Number of Sequences: 3902068 Number of extensions: 1806574 Number of successful extensions: 43146 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41731 Number of HSP's gapped (non-prelim): 1413 length of query: 369 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 347 effective length of database: 17,147,199,772 effective search space: 5950078320884 effective search space used: 5950078320884 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
