ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 158 5e-39
2AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 57 3e-08
3AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 55 1e-07
4XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-) 54 2e-07
5SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Su... 33 0.27
6SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucr... 32 0.78
7SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Su... 32 1.0
8Y1378_CORDI (P62034) UPF0082 protein DIP1378 30 2.3
9LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.... 30 2.3
10XYLA_RUMFL (Q9S306) Xylose isomerase (EC 5.3.1.5) 30 2.3
11TODE_PSEPU (P13453) 3-methylcatechol 2,3-dioxygenase (EC 1.13.11.-) 30 2.9
12MUTL_XANCP (Q8P8E4) DNA mismatch repair protein mutL 30 3.8
13CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 ... 30 3.8
14SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Su... 30 3.8
15AREA_PENCH (Q01582) Nitrogen regulatory protein areA (Nitrogen r... 30 3.8
16BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231) 28 8.6

>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 877

 Score =  158 bits (400), Expect = 5e-39
 Identities = 87/121 (71%), Positives = 89/121 (73%)
 Frame = +1

Query: 97  FAPRLCSSKEEGPLAAGGYRVSRVAVDDXXXXXXXXXXXXXXXXXXXXDVQRLAVYASLE 276
           FAPRLCSSKEEGPLAA       V ++                     DVQRLAVYASLE
Sbjct: 16  FAPRLCSSKEEGPLAARTVLAVAVTMEGALRAEAATGGRSSTG-----DVQRLAVYASLE 70

Query: 277 TDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQGSRVLSAAGSDLVLT 456
           TDSRLRVRITDADHPRWEVPQDIIPRPAP DVLHDAPPASSAPLQG RVLS AGSDLVLT
Sbjct: 71  TDSRLRVRITDADHPRWEVPQDIIPRPAPGDVLHDAPPASSAPLQG-RVLSPAGSDLVLT 129

Query: 457 V 459
           V
Sbjct: 130 V 130



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>AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 903

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
 Frame = +1

Query: 148 GYRVSRVAVDDXXXXXXXXXXXXXXXXXXXX-DVQRLAVYASLETDSRLRVRITDADHPR 324
           GY+V  V VD                      D+Q L++ ASLE++ RLRVRITDA H R
Sbjct: 39  GYKVKSVKVDSGTRRSLTALPQLVKNSSVYGPDIQLLSITASLESNDRLRVRITDAKHRR 98

Query: 325 WEVPQDII-----PRPAPADVLHDAPPASSAPLQGSR--VLSAAGSDLVLTV 459
           WE+P +I+     P P P  +        S+P    R  +LS   SDL  ++
Sbjct: 99  WEIPDNILHRHQPPPPPPHSLSSLYRTLLSSPTTNRRKILLSHPNSDLTFSL 150



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>AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 913

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
 Frame = +1

Query: 127 EGPLAAGGYRVSRVAVDDXXXXXXXXXXXXXXXXXXXX-DVQRLAVYASLETDSRLRVRI 303
           +G     GY+V    VD+                     D+  L+  AS E D  LR+R 
Sbjct: 37  QGEAIGYGYQVKNAKVDNSTGKSLTALLQLIRNSPVYGPDIHFLSFTASFEEDDTLRIRF 96

Query: 304 TDADHPRWEVPQDIIPRPAPADVLHDAPPASS-----APLQGSR----VLSAAGSDLVLT 456
           TDA++ RWE+P +++PRP P       PP SS      P+  ++    VLS   SDL  T
Sbjct: 97  TDANNRRWEIPNEVLPRPPPPP---SPPPLSSLQHLPKPIPQNQPTTTVLSHPHSDLAFT 153

Query: 457 V 459
           +
Sbjct: 154 L 154



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>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)|
          Length = 915

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 28/72 (38%), Positives = 41/72 (56%)
 Frame = +1

Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQGSR 420
           D+  L ++   ETDSRLRV ITDA   RWEVP +++PR  P  V      +  +P+    
Sbjct: 64  DITTLRLFVKHETDSRLRVHITDAKQQRWEVPYNLLPREQPPQVGKVIGKSRKSPI---T 120

Query: 421 VLSAAGSDLVLT 456
           V   +GS+L+ +
Sbjct: 121 VQEISGSELIFS 132



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>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1826

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +1

Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHD 381
           D+  + +    +T +RLR ++TD ++ R+EVP   +     PA  + L+D
Sbjct: 141 DINNVLLTTESQTANRLRFKLTDPNNKRYEVPHQFVTEFAGPAATETLYD 190



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>SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1840

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPA---PADVLHD 381
           D++ + +    +T +R R +ITD ++ R+EVP   +        AD L+D
Sbjct: 151 DIKSVILTTQTQTGNRFRFKITDPNNKRYEVPHQFVKEETGIPAADTLYD 200



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>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1826

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHDAPPASS 399
           D+  +      +T +R R +ITD ++ R+EVP   +     P  +D L+D   A +
Sbjct: 141 DINSVLFTTQNQTPNRFRFKITDPNNRRYEVPHQYVKEFTGPTVSDTLYDVKVAQN 196



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>Y1378_CORDI (P62034) UPF0082 protein DIP1378|
          Length = 250

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
 Frame = -2

Query: 398 EEAGGASWRTSAGAGRG------MMSCGTSHRGWSASVMRT 294
           EEAGGA W+T    G G      ++ C T +R  +AS +RT
Sbjct: 76  EEAGGADWQTIMYEGYGPNGVAVLIECLTDNRNRAASEVRT 116



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>LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid|
           maltase)
          Length = 953

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAP 387
           DV  L +   +ETDSRL  +I D    R+EVP +  PR     VL  AP
Sbjct: 163 DVLTLQLEVLMETDSRLHFKIKDPASKRYEVPLE-TPR-----VLSQAP 205



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>XYLA_RUMFL (Q9S306) Xylose isomerase (EC 5.3.1.5)|
          Length = 438

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 377 WRTSAGAGRGMMSCGTSHRGWSASVMRTRSRLSV 276
           W T  G G  M  CGT+ + W  S    R++  V
Sbjct: 48  WHTMGGDGTDMFGCGTTDKTWGQSDPAARAKAKV 81



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>TODE_PSEPU (P13453) 3-methylcatechol 2,3-dioxygenase (EC 1.13.11.-)|
          Length = 290

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = -2

Query: 419 RLPWSGAEEAGGASWRTSAGAGRGMMSCGTSHRGWSASVMRTRSRLSVSR 270
           RL + G E A   SWRT A    GMM    S    +  +     RLSVSR
Sbjct: 4   RLGYLGFEVADVRSWRTFATTRLGMMEASASETEATFRIDSRAWRLSVSR 53



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>MUTL_XANCP (Q8P8E4) DNA mismatch repair protein mutL|
          Length = 624

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 389 GGASWRTSAGAGRGMMSCGTSHRGWSASVMRTRSRLSVSRLAYTA 255
           GG S+   AGAG      G+ +  W+ S      R+  +R AY A
Sbjct: 355 GGGSYVADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAA 399



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>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)|
           (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen
           240 kDa protein) (Mi2-alpha) (Zinc-finger helicase)
           (hZFH)
          Length = 2000

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 289 LRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQG 414
           L+ R+    H RW  P   +P P  AD   D PP    PLQG
Sbjct: 505 LKGRVQKILHWRWGEPPVAVPAPQQADGNPDVPP--PRPLQG 544



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>SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1812

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +1

Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASS 399
           ++  L +    +T +R R +ITD ++ R+EVP   + +          PPAS+
Sbjct: 126 NITNLLLTTQSQTANRFRFKITDPNNQRYEVPHQFVNKD------FSGPPASN 172



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>AREA_PENCH (Q01582) Nitrogen regulatory protein areA (Nitrogen regulator nre)|
          Length = 725

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +1

Query: 292 RVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQGSRVLSAAGSDLVL 453
           RVR T  D  ++     +  R  PA+     PP S+A +  S  LSAA  D  L
Sbjct: 98  RVRKTSVDERQFFAGLSVPTRKRPAEASPQVPPVSNAMMAHSSELSAALPDYSL 151



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>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 355  PAPADVLHDAPPASSAPLQGSRVLSAAG 438
            PAPA +    PPA +AP  GS  LS  G
Sbjct: 2325 PAPAPLAGQKPPADAAPGGGSGALSRPG 2352


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.129    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,393,736
Number of Sequences: 219361
Number of extensions: 670651
Number of successful extensions: 3557
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3481
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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