Clone Name | bastl30b12 |
---|---|
Clone Library Name | barley_pub |
>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 877 Score = 158 bits (400), Expect = 5e-39 Identities = 87/121 (71%), Positives = 89/121 (73%) Frame = +1 Query: 97 FAPRLCSSKEEGPLAAGGYRVSRVAVDDXXXXXXXXXXXXXXXXXXXXDVQRLAVYASLE 276 FAPRLCSSKEEGPLAA V ++ DVQRLAVYASLE Sbjct: 16 FAPRLCSSKEEGPLAARTVLAVAVTMEGALRAEAATGGRSSTG-----DVQRLAVYASLE 70 Query: 277 TDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQGSRVLSAAGSDLVLT 456 TDSRLRVRITDADHPRWEVPQDIIPRPAP DVLHDAPPASSAPLQG RVLS AGSDLVLT Sbjct: 71 TDSRLRVRITDADHPRWEVPQDIIPRPAPGDVLHDAPPASSAPLQG-RVLSPAGSDLVLT 129 Query: 457 V 459 V Sbjct: 130 V 130
>AGLU_SPIOL (O04893) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 903 Score = 56.6 bits (135), Expect = 3e-08 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 8/112 (7%) Frame = +1 Query: 148 GYRVSRVAVDDXXXXXXXXXXXXXXXXXXXX-DVQRLAVYASLETDSRLRVRITDADHPR 324 GY+V V VD D+Q L++ ASLE++ RLRVRITDA H R Sbjct: 39 GYKVKSVKVDSGTRRSLTALPQLVKNSSVYGPDIQLLSITASLESNDRLRVRITDAKHRR 98 Query: 325 WEVPQDII-----PRPAPADVLHDAPPASSAPLQGSR--VLSAAGSDLVLTV 459 WE+P +I+ P P P + S+P R +LS SDL ++ Sbjct: 99 WEIPDNILHRHQPPPPPPHSLSSLYRTLLSSPTTNRRKILLSHPNSDLTFSL 150
>AGLU_BETVU (O04931) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 913 Score = 54.7 bits (130), Expect = 1e-07 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 10/121 (8%) Frame = +1 Query: 127 EGPLAAGGYRVSRVAVDDXXXXXXXXXXXXXXXXXXXX-DVQRLAVYASLETDSRLRVRI 303 +G GY+V VD+ D+ L+ AS E D LR+R Sbjct: 37 QGEAIGYGYQVKNAKVDNSTGKSLTALLQLIRNSPVYGPDIHFLSFTASFEEDDTLRIRF 96 Query: 304 TDADHPRWEVPQDIIPRPAPADVLHDAPPASS-----APLQGSR----VLSAAGSDLVLT 456 TDA++ RWE+P +++PRP P PP SS P+ ++ VLS SDL T Sbjct: 97 TDANNRRWEIPNEVLPRPPPPP---SPPPLSSLQHLPKPIPQNQPTTTVLSHPHSDLAFT 153 Query: 457 V 459 + Sbjct: 154 L 154
>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)| Length = 915 Score = 53.5 bits (127), Expect = 2e-07 Identities = 28/72 (38%), Positives = 41/72 (56%) Frame = +1 Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQGSR 420 D+ L ++ ETDSRLRV ITDA RWEVP +++PR P V + +P+ Sbjct: 64 DITTLRLFVKHETDSRLRVHITDAKQQRWEVPYNLLPREQPPQVGKVIGKSRKSPI---T 120 Query: 421 VLSAAGSDLVLT 456 V +GS+L+ + Sbjct: 121 VQEISGSELIFS 132
>SUIS_RABIT (P07768) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 33.5 bits (75), Expect = 0.27 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +1 Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHD 381 D+ + + +T +RLR ++TD ++ R+EVP + PA + L+D Sbjct: 141 DINNVLLTTESQTANRLRFKLTDPNNKRYEVPHQFVTEFAGPAATETLYD 190
>SUIS_RAT (P23739) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1840 Score = 32.0 bits (71), Expect = 0.78 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +1 Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPA---PADVLHD 381 D++ + + +T +R R +ITD ++ R+EVP + AD L+D Sbjct: 151 DIKSVILTTQTQTGNRFRFKITDPNNKRYEVPHQFVKEETGIPAADTLYD 200
>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1826 Score = 31.6 bits (70), Expect = 1.0 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +1 Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPR---PAPADVLHDAPPASS 399 D+ + +T +R R +ITD ++ R+EVP + P +D L+D A + Sbjct: 141 DINSVLFTTQNQTPNRFRFKITDPNNRRYEVPHQYVKEFTGPTVSDTLYDVKVAQN 196
>Y1378_CORDI (P62034) UPF0082 protein DIP1378| Length = 250 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Frame = -2 Query: 398 EEAGGASWRTSAGAGRG------MMSCGTSHRGWSASVMRT 294 EEAGGA W+T G G ++ C T +R +AS +RT Sbjct: 76 EEAGGADWQTIMYEGYGPNGVAVLIECLTDNRNRAASEVRT 116
>LYAG_MOUSE (P70699) Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid| maltase) Length = 953 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = +1 Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAP 387 DV L + +ETDSRL +I D R+EVP + PR VL AP Sbjct: 163 DVLTLQLEVLMETDSRLHFKIKDPASKRYEVPLE-TPR-----VLSQAP 205
>XYLA_RUMFL (Q9S306) Xylose isomerase (EC 5.3.1.5)| Length = 438 Score = 30.4 bits (67), Expect = 2.3 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -2 Query: 377 WRTSAGAGRGMMSCGTSHRGWSASVMRTRSRLSV 276 W T G G M CGT+ + W S R++ V Sbjct: 48 WHTMGGDGTDMFGCGTTDKTWGQSDPAARAKAKV 81
>TODE_PSEPU (P13453) 3-methylcatechol 2,3-dioxygenase (EC 1.13.11.-)| Length = 290 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/50 (40%), Positives = 23/50 (46%) Frame = -2 Query: 419 RLPWSGAEEAGGASWRTSAGAGRGMMSCGTSHRGWSASVMRTRSRLSVSR 270 RL + G E A SWRT A GMM S + + RLSVSR Sbjct: 4 RLGYLGFEVADVRSWRTFATTRLGMMEASASETEATFRIDSRAWRLSVSR 53
>MUTL_XANCP (Q8P8E4) DNA mismatch repair protein mutL| Length = 624 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 Query: 389 GGASWRTSAGAGRGMMSCGTSHRGWSASVMRTRSRLSVSRLAYTA 255 GG S+ AGAG G+ + W+ S R+ +R AY A Sbjct: 355 GGGSYVADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAA 399
>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)| (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen 240 kDa protein) (Mi2-alpha) (Zinc-finger helicase) (hZFH) Length = 2000 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 Query: 289 LRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQG 414 L+ R+ H RW P +P P AD D PP PLQG Sbjct: 505 LKGRVQKILHWRWGEPPVAVPAPQQADGNPDVPP--PRPLQG 544
>SUIS_SUNMU (O62653) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC| 3.2.1.48); Isomaltase (EC 3.2.1.10)] Length = 1812 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = +1 Query: 241 DVQRLAVYASLETDSRLRVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASS 399 ++ L + +T +R R +ITD ++ R+EVP + + PPAS+ Sbjct: 126 NITNLLLTTQSQTANRFRFKITDPNNQRYEVPHQFVNKD------FSGPPASN 172
>AREA_PENCH (Q01582) Nitrogen regulatory protein areA (Nitrogen regulator nre)| Length = 725 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +1 Query: 292 RVRITDADHPRWEVPQDIIPRPAPADVLHDAPPASSAPLQGSRVLSAAGSDLVL 453 RVR T D ++ + R PA+ PP S+A + S LSAA D L Sbjct: 98 RVRKTSVDERQFFAGLSVPTRKRPAEASPQVPPVSNAMMAHSSELSAALPDYSL 151
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 355 PAPADVLHDAPPASSAPLQGSRVLSAAG 438 PAPA + PPA +AP GS LS G Sbjct: 2325 PAPAPLAGQKPPADAAPGGGSGALSRPG 2352 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.129 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,393,736 Number of Sequences: 219361 Number of extensions: 670651 Number of successful extensions: 3557 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3037 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3481 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)