ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl30b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466650.1| Oryza sativa (japonica cultivar-group), mRNA 341 1e-90
2dbj|AK073527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 1e-90
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 285 6e-74
4dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 285 6e-74
5dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 285 6e-74
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
7dbj|AK106832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
9emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.40
10gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, c... 42 1.6
11ref|XM_516408.1| PREDICTED: Pan troglodytes similar to brain spe... 42 1.6
12gb|BC057390.1| Homo sapiens Ras-induced senescence 1, mRNA (cDNA... 42 1.6
13ref|NM_015444.1| Homo sapiens Ras-induced senescence 1 (RIS1), mRNA 42 1.6
14emb|CR621614.1| full-length cDNA clone CS0DN002YN22 of Adult bra... 42 1.6
15emb|CR615050.1| full-length cDNA clone CS0DF008YL24 of Fetal bra... 42 1.6
16emb|CR593631.1| full-length cDNA clone CS0DF009YM08 of Fetal bra... 42 1.6
17emb|CR591255.1| full-length cDNA clone CS0DF001YF09 of Fetal bra... 42 1.6
18gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Pa... 42 1.6
19gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell... 42 1.6
20gb|AF438313.1| Homo sapiens Ras-induced senescence 1 (RIS1) mRNA... 42 1.6
21gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.2
22gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
23ref|XM_649289.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.2
24emb|AL512292.5| Human DNA sequence from clone RP11-292O17 on chr... 40 6.2
25gb|AC099780.2| Homo sapiens chromosome 3 clone RP11-769M23, comp... 40 6.2
26dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
27emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in ... 40 6.2
28gb|AF152364.1|AF152364 Homo sapiens constitutive fragile region ... 40 6.2
29gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2 
>ref|XM_466650.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3202

 Score =  341 bits (172), Expect = 1e-90
 Identities = 295/336 (87%)
 Strand = Plus / Plus

                                                                       
Query: 127 gaatccccgccgcccccggcgccgcgacctcaacgcactggatccgtatttagaggagtc 186
           ||||||||||||| | |||||||||||||||||||||||||||||   |||||| |||||
Sbjct: 358 gaatccccgccgcgcgcggcgccgcgacctcaacgcactggatcccagtttagaagagtc 417

                                                                       
Query: 187 ttatggacaggacattggcattccagaagttggcatggtgttcaataaccacatggaggt 246
           | ||||| |||| |||||  ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 418 tgatggagaggatattggtgttccagaagttggcatggtgttcaataaccacacggaggt 477

                                                                       
Query: 247 caaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctcagttaggaggtc 306
           |||||| |||||||| |||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 478 caaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtctgttaggaggtc 537

                                                                       
Query: 307 ctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctgtaaaggagggcg 366
           ||| || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 538 ctcattttcacaagagggcacctgcttatatctggagctcatgtgctgcaaaggagggcg 597

                                                                       
Query: 367 tccacgttatgagcctaaattcaggaagcgggcctcatcaaccaccaattgcccagccag 426
            |||||||||||||| || |||||||| |||||||| |||||||| || || ||||||| 
Sbjct: 598 gccacgttatgagccaaagttcaggaaacgggcctcttcaaccactaactgtccagccaa 657

                                               
Query: 427 gatccgggtgaaattatggggagacaaattgttgca 462
           |||| | || ||  |||||||||| |||||||||||
Sbjct: 658 gatcagagtaaagctatggggagataaattgttgca 693
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>dbj|AK073527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046M02, full
           insert sequence
          Length = 3202

 Score =  341 bits (172), Expect = 1e-90
 Identities = 295/336 (87%)
 Strand = Plus / Plus

                                                                       
Query: 127 gaatccccgccgcccccggcgccgcgacctcaacgcactggatccgtatttagaggagtc 186
           ||||||||||||| | |||||||||||||||||||||||||||||   |||||| |||||
Sbjct: 358 gaatccccgccgcgcgcggcgccgcgacctcaacgcactggatcccagtttagaagagtc 417

                                                                       
Query: 187 ttatggacaggacattggcattccagaagttggcatggtgttcaataaccacatggaggt 246
           | ||||| |||| |||||  ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 418 tgatggagaggatattggtgttccagaagttggcatggtgttcaataaccacacggaggt 477

                                                                       
Query: 247 caaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctcagttaggaggtc 306
           |||||| |||||||| |||||||| || |||||||| ||||| || || |||||||||||
Sbjct: 478 caaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtctgttaggaggtc 537

                                                                       
Query: 307 ctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctgtaaaggagggcg 366
           ||| || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 538 ctcattttcacaagagggcacctgcttatatctggagctcatgtgctgcaaaggagggcg 597

                                                                       
Query: 367 tccacgttatgagcctaaattcaggaagcgggcctcatcaaccaccaattgcccagccag 426
            |||||||||||||| || |||||||| |||||||| |||||||| || || ||||||| 
Sbjct: 598 gccacgttatgagccaaagttcaggaaacgggcctcttcaaccactaactgtccagccaa 657

                                               
Query: 427 gatccgggtgaaattatggggagacaaattgttgca 462
           |||| | || ||  |||||||||| |||||||||||
Sbjct: 658 gatcagagtaaagctatggggagataaattgttgca 693
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  285 bits (144), Expect = 6e-74
 Identities = 252/288 (87%)
 Strand = Plus / Plus

                                                                            
Query: 175      tttagaggagtcttatggacaggacattggcattccagaagttggcatggtgttcaataa 234
                |||||| |||||| ||||| |||| |||||  ||||||||||||||||||||||||||||
Sbjct: 23880539 tttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataa 23880598

                                                                            
Query: 235      ccacatggaggtcaaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctc 294
                ||||| |||||||||||| |||||||| |||||||| || |||||||| ||||| || ||
Sbjct: 23880599 ccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtc 23880658

                                                                            
Query: 295      agttaggaggtcctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctg 354
                 |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 23880659 tgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctg 23880718

                                                                            
Query: 355      taaaggagggcgtccacgttatgagcctaaattcaggaagcgggcctcatcaaccaccaa 414
                 ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct: 23880719 caaaggagggcggccacgttatgagccaaagttcaggaaacgggcctcttcaaccactaa 23880778

                                                                
Query: 415      ttgcccagccaggatccgggtgaaattatggggagacaaattgttgca 462
                 || ||||||| |||| | || ||  |||||||||| |||||||||||
Sbjct: 23880779 ctgtccagccaagatcagagtaaagctatggggagataaattgttgca 23880826



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                         
Query: 127      gaatccccgccgcccccggcgccgcgacctcaacgcactgg 167
                ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 23879716 gaatccccgccgcgcgcggcgccgcgacctcaacgcactgg 23879756
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>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030C08
          Length = 163423

 Score =  285 bits (144), Expect = 6e-74
 Identities = 252/288 (87%)
 Strand = Plus / Plus

                                                                          
Query: 175    tttagaggagtcttatggacaggacattggcattccagaagttggcatggtgttcaataa 234
              |||||| |||||| ||||| |||| |||||  ||||||||||||||||||||||||||||
Sbjct: 102205 tttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataa 102264

                                                                          
Query: 235    ccacatggaggtcaaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctc 294
              ||||| |||||||||||| |||||||| |||||||| || |||||||| ||||| || ||
Sbjct: 102265 ccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtc 102324

                                                                          
Query: 295    agttaggaggtcctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctg 354
               |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 102325 tgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctg 102384

                                                                          
Query: 355    taaaggagggcgtccacgttatgagcctaaattcaggaagcgggcctcatcaaccaccaa 414
               ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct: 102385 caaaggagggcggccacgttatgagccaaagttcaggaaacgggcctcttcaaccactaa 102444

                                                              
Query: 415    ttgcccagccaggatccgggtgaaattatggggagacaaattgttgca 462
               || ||||||| |||| | || ||  |||||||||| |||||||||||
Sbjct: 102445 ctgtccagccaagatcagagtaaagctatggggagataaattgttgca 102492



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                       
Query: 127    gaatccccgccgcccccggcgccgcgacctcaacgcactgg 167
              ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 101382 gaatccccgccgcgcgcggcgccgcgacctcaacgcactgg 101422
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>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0496E03
          Length = 138622

 Score =  285 bits (144), Expect = 6e-74
 Identities = 252/288 (87%)
 Strand = Plus / Plus

                                                                         
Query: 175   tttagaggagtcttatggacaggacattggcattccagaagttggcatggtgttcaataa 234
             |||||| |||||| ||||| |||| |||||  ||||||||||||||||||||||||||||
Sbjct: 14503 tttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataa 14562

                                                                         
Query: 235   ccacatggaggtcaaccggttctaccgtaggtatgcccgtcgtgttggttttggtgtctc 294
             ||||| |||||||||||| |||||||| |||||||| || |||||||| ||||| || ||
Sbjct: 14563 ccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtc 14622

                                                                         
Query: 295   agttaggaggtcctcgttctcacaagaaggcacctgcttatatctcgagctgatgtgctg 354
              |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 14623 tgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctg 14682

                                                                         
Query: 355   taaaggagggcgtccacgttatgagcctaaattcaggaagcgggcctcatcaaccaccaa 414
              ||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct: 14683 caaaggagggcggccacgttatgagccaaagttcaggaaacgggcctcttcaaccactaa 14742

                                                             
Query: 415   ttgcccagccaggatccgggtgaaattatggggagacaaattgttgca 462
              || ||||||| |||| | || ||  |||||||||| |||||||||||
Sbjct: 14743 ctgtccagccaagatcagagtaaagctatggggagataaattgttgca 14790



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                      
Query: 127   gaatccccgccgcccccggcgccgcgacctcaacgcactgg 167
             ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 13680 gaatccccgccgcgcgcggcgccgcgacctcaacgcactgg 13720
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 66       cgacctcgccggcggtgggctc 87
                ||||||||||||||||||||||
Sbjct: 18619078 cgacctcgccggcggtgggctc 18619099
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>dbj|AK106832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F10, full
            insert sequence
          Length = 2372

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 66   cgacctcgccggcggtgggctc 87
            ||||||||||||||||||||||
Sbjct: 1210 cgacctcgccggcggtgggctc 1231
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 66       cgacctcgccggcggtgggctc 87
                ||||||||||||||||||||||
Sbjct: 18545304 cgacctcgccggcggtgggctc 18545325
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>emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC OSJNBa0023G11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 180599

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 66    cgacctcgccggcggtgggctc 87
             ||||||||||||||||||||||
Sbjct: 52530 cgacctcgccggcggtgggctc 52551
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>gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, complete sequence
          Length = 171409

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 42    ccccacccgctcccaaaccctagcc 66
             |||||||||||||| ||||||||||
Sbjct: 67413 ccccacccgctccccaaccctagcc 67389
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>ref|XM_516408.1| PREDICTED: Pan troglodytes similar to brain specific binding protein;
            BINP receptor (LOC460316), mRNA
          Length = 3103

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 130  tccccgccgcccccggcgccg 150
            |||||||||||||||||||||
Sbjct: 1613 tccccgccgcccccggcgccg 1593
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>gb|BC057390.1| Homo sapiens Ras-induced senescence 1, mRNA (cDNA clone MGC:57838
           IMAGE:6175193), complete cds
          Length = 1798

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 tccccgccgcccccggcgccg 150
           |||||||||||||||||||||
Sbjct: 38  tccccgccgcccccggcgccg 18
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>ref|NM_015444.1| Homo sapiens Ras-induced senescence 1 (RIS1), mRNA
          Length = 1797

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 tccccgccgcccccggcgccg 150
           |||||||||||||||||||||
Sbjct: 22  tccccgccgcccccggcgccg 2
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>emb|CR621614.1| full-length cDNA clone CS0DN002YN22 of Adult brain of Homo sapiens
           (human)
          Length = 1781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 tccccgccgcccccggcgccg 150
           |||||||||||||||||||||
Sbjct: 58  tccccgccgcccccggcgccg 38
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>emb|CR615050.1| full-length cDNA clone CS0DF008YL24 of Fetal brain of Homo sapiens
           (human)
          Length = 1804

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 tccccgccgcccccggcgccg 150
           |||||||||||||||||||||
Sbjct: 38  tccccgccgcccccggcgccg 18
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>emb|CR593631.1| full-length cDNA clone CS0DF009YM08 of Fetal brain of Homo sapiens
           (human)
          Length = 1796

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 tccccgccgcccccggcgccg 150
           |||||||||||||||||||||
Sbjct: 38  tccccgccgcccccggcgccg 18
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>emb|CR591255.1| full-length cDNA clone CS0DF001YF09 of Fetal brain of Homo sapiens
           (human)
          Length = 1798

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 tccccgccgcccccggcgccg 150
           |||||||||||||||||||||
Sbjct: 58  tccccgccgcccccggcgccg 38
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>gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 223542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   tccccgccgcccccggcgccg 150
             |||||||||||||||||||||
Sbjct: 28072 tccccgccgcccccggcgccg 28092
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>gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 173977

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    tccccgccgcccccggcgccg 150
              |||||||||||||||||||||
Sbjct: 101327 tccccgccgcccccggcgccg 101347
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>gb|AF438313.1| Homo sapiens Ras-induced senescence 1 (RIS1) mRNA, complete cds
          Length = 1797

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 130 tccccgccgcccccggcgccg 150
           |||||||||||||||||||||
Sbjct: 22  tccccgccgcccccggcgccg 2
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     cccgccgcccccggcgccgc 151
               ||||||||||||||||||||
Sbjct: 2248867 cccgccgcccccggcgccgc 2248886
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>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0078F08, complete sequence
          Length = 165440

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    ctcccaaaccctagccgacctcgc 74
             |||||||||||||||| |||||||
Sbjct: 79347 ctcccaaaccctagcccacctcgc 79370
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>ref|XM_649289.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (55.t00016)
           partial mRNA
          Length = 414

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 caataaccacatggaggtca 248
           ||||||||||||||||||||
Sbjct: 203 caataaccacatggaggtca 222
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>emb|AL512292.5| Human DNA sequence from clone RP11-292O17 on chromosome 1 Contains a
             ribosomal protein L31 (RPL31) pseudogene, complete
             sequence
          Length = 135389

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gtgttcaataaccacatgga 243
             ||||||||||||||||||||
Sbjct: 33998 gtgttcaataaccacatgga 33979
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>gb|AC099780.2| Homo sapiens chromosome 3 clone RP11-769M23, complete sequence
          Length = 193793

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      ttcatttgtcaccaaaattt 27
              ||||||||||||||||||||
Sbjct: 147253 ttcatttgtcaccaaaattt 147234
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 51       ctcccaaaccctagccgacctcgc 74
                |||||||||||||||| |||||||
Sbjct: 18500032 ctcccaaaccctagcccacctcgc 18500055
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>emb|AL929023.3| Zebrafish DNA sequence from clone DKEY-98G12 in linkage group 17,
              complete sequence
          Length = 198736

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aattcatttgtcaccaaaat 25
              ||||||||||||||||||||
Sbjct: 190262 aattcatttgtcaccaaaat 190243
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>gb|AF152364.1|AF152364 Homo sapiens constitutive fragile region FRA3B sequence
          Length = 170452

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     ttcatttgtcaccaaaattt 27
             ||||||||||||||||||||
Sbjct: 63770 ttcatttgtcaccaaaattt 63751
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 51       ctcccaaaccctagccgacctcgc 74
                |||||||||||||||| |||||||
Sbjct: 18659433 ctcccaaaccctagcccacctcgc 18659456


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,365,522
Number of Sequences: 3902068
Number of extensions: 3365522
Number of successful extensions: 66652
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66388
Number of HSP's gapped (non-prelim): 264
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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