ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30b05 |
|---|---|
| Clone Library Name | barley_pub |
>SEY1_EMENI (Q5BEE5) Protein sey1| Length = 858 Score = 151 bits (382), Expect = 7e-37 Identities = 86/167 (51%), Positives = 112/167 (67%), Gaps = 11/167 (6%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHN-----IEPCTLVMDL 166 S+ G QS+GKSTLLNHLF T+F M A R QTTKGIW++K N + LVMD+ Sbjct: 57 SVFGSQSTGKSTLLNHLFGTHFSVM-AETERRQTTKGIWLSKNKNGDGKSMADNILVMDV 115 Query: 167 EGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRL 346 EGTDGRERGED FE++SALFALA S+++++N+W H +G Q AN LLKTVF+V ++L Sbjct: 116 EGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQVGLYQGANMGLLKTVFEVNLQL 174 Query: 347 FSPRKTT-----MLFVIRD-KSKTPLEDLEPILREDIQKIWDGVPNP 469 F K T + FVIRD TPL+ L+ L ED+ ++WD + P Sbjct: 175 FLKDKNTTHRSLLFFVIRDFVGTTPLKALQKTLMEDMSRLWDSISKP 221
>SEY1_NEUCR (Q9P5X6) Protein sey-1| Length = 862 Score = 149 bits (375), Expect = 5e-36 Identities = 85/165 (51%), Positives = 109/165 (66%), Gaps = 9/165 (5%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHN---IEPCTLVMDLEG 172 S+ G QS+GKSTLLNHLF T F M R R QTTKGIWM+K N + LVMD+EG Sbjct: 60 SVFGSQSTGKSTLLNHLFGTQFSVMSE-RERRQTTKGIWMSKNKNEGKMADNILVMDVEG 118 Query: 173 TDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLF- 349 TDGRERGED FE++SALFALA S+++++N+W H +G Q AN LLKTVF+V M+LF Sbjct: 119 TDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQVGLYQGANMGLLKTVFEVNMQLFL 177 Query: 350 ----SPRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 + ++ + FVIRD TPL +L L +D+ IW + P Sbjct: 178 KDKQNQTRSLLFFVIRDHIGVTPLANLRNTLIQDLTHIWSSISKP 222
>SEY1_ASPFU (Q8TGG5) Protein sey1| Length = 864 Score = 148 bits (373), Expect = 8e-36 Identities = 85/173 (49%), Positives = 111/173 (64%), Gaps = 17/173 (9%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCT---------- 151 S+ G QS+GKSTLLNHLF T+F M R QTTKGIWM+K T Sbjct: 56 SVFGSQSTGKSTLLNHLFGTHFSVMSDSE-RRQTTKGIWMSKNKREGEATVDPTLRMADN 114 Query: 152 -LVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVF 328 LVMD+EGTDGRERGED FE++SALFALA S+++++N+W H +G Q AN LLKTVF Sbjct: 115 ILVMDVEGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQVGLYQGANMGLLKTVF 173 Query: 329 QVMMRLFSPRKTT-----MLFVIRD-KSKTPLEDLEPILREDIQKIWDGVPNP 469 +V ++LF K T + FVIRD TPL++L+ L ED+ ++W+ + P Sbjct: 174 EVNLQLFLKDKNTTHRSLLFFVIRDFVGTTPLKNLQKTLMEDMARLWESISKP 226
>SEY1_YARLI (Q6C3B0) Protein SEY1| Length = 938 Score = 146 bits (369), Expect = 2e-35 Identities = 86/173 (49%), Positives = 112/173 (64%), Gaps = 17/173 (9%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEP----------CT 151 ++ G QS+GKSTLLN LF T F M+ R QTTKGIWMA+A P C+ Sbjct: 199 AVFGSQSTGKSTLLNALFGTQFDVMNE-TARQQTTKGIWMARAQLEAPHSANSAHSQDCS 257 Query: 152 ----LVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLK 319 LVMD+EGTDGRERGED FE++SALFALA S+++++N+W H IG Q AN LLK Sbjct: 258 DSGVLVMDVEGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQIGLYQGANMGLLK 316 Query: 320 TVFQVMMRLF--SPRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 TVF+V + LF S ++ ++FVIRD TPL +L L+ D+ K+WD + P Sbjct: 317 TVFEVNLNLFATSQNRSLIMFVIRDHIGATPLANLSTTLKTDMGKLWDSINKP 369
>SEY1_MAGGR (Q525S7) Protein SEY1| Length = 848 Score = 146 bits (368), Expect = 3e-35 Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 13/169 (7%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAK-------AHNIEPCTLVM 160 S+ G QS+GKSTLLN+LF T F M R QTTKGIWM+K A NI LVM Sbjct: 54 SVFGSQSTGKSTLLNNLFGTEFSVMSESE-RRQTTKGIWMSKNKREGKMAENI----LVM 108 Query: 161 DLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMM 340 D+EGTDGRERGED FE++SALFALA S+++++N+W H +G Q AN LLKTVF+V + Sbjct: 109 DVEGTDGRERGEDQD-FERKSALFALATSEVLIVNIWEHQVGLYQGANMGLLKTVFEVNL 167 Query: 341 RLF-----SPRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 +LF S ++ + FVIRD TPL +L L +D+ KIW + P Sbjct: 168 QLFLKDKQSSPRSLLFFVIRDHIGNTPLSNLRNTLVQDLTKIWSSISKP 216
>SEY1_DEBHA (Q6BK59) Protein SEY1| Length = 847 Score = 145 bits (366), Expect = 5e-35 Identities = 86/174 (49%), Positives = 110/174 (63%), Gaps = 18/174 (10%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKA----------HNIEPCT 151 S+ G QS+GKSTLLNHLF TNF MD + R QTTKGIWMA + +E Sbjct: 73 SVFGSQSTGKSTLLNHLFNTNFDVMDESK-RQQTTKGIWMAHSPLVSSTLTNGSKLEENI 131 Query: 152 LVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQ 331 VMD+EGTDGRERGED FE+++ALFAL+ S+I++IN+W +G Q AN LLKTVF+ Sbjct: 132 FVMDVEGTDGRERGEDQD-FERKAALFALSTSEILIINIWETQVGLYQGANMGLLKTVFE 190 Query: 332 VMMRLF-------SPRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 V + LF + K +LFVIRD TPLE+L L +D+ +WD + P Sbjct: 191 VNLSLFGKSKLDKNDHKVLLLFVIRDHIGVTPLENLAATLTQDLVAMWDSLNIP 244
>SEY1_USTMA (Q4PEQ0) Protein SEY1| Length = 912 Score = 145 bits (365), Expect = 7e-35 Identities = 82/166 (49%), Positives = 108/166 (65%), Gaps = 10/166 (6%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCTLVMDLEGTDG 181 +++G QS+GKSTLLN LF TNF M R QTTKGIWM K + LVMD+EGTDG Sbjct: 186 AVLGSQSTGKSTLLNKLFGTNFDVMSE-SARQQTTKGIWMCKGLKMN--VLVMDVEGTDG 242 Query: 182 RERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLF---- 349 RERGED FE++SALF++A ++++++N+W H +G Q AN LLKTVF+V + LF Sbjct: 243 RERGEDQD-FERKSALFSMASAEVLIVNLWEHQVGLYQGANMGLLKTVFEVNLGLFQASR 301 Query: 350 -----SPRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 + KT +LFVIRD TPLE+L + D+ KIW + P Sbjct: 302 AKTAGAKDKTLLLFVIRDHIGVTPLENLSATIMADLTKIWHSLSKP 347
>SEY1_CRYNE (Q5K8P4) Protein SEY1| Length = 829 Score = 144 bits (364), Expect = 9e-35 Identities = 82/167 (49%), Positives = 108/167 (64%), Gaps = 11/167 (6%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCTLVMDLEGTDG 181 ++ G QS+GKSTLLN LF T F MD + R QTTKGIWM + TLVMD+EGTDG Sbjct: 94 AVFGSQSTGKSTLLNRLFGTTFDVMDESK-RQQTTKGIWMCPSQYSN--TLVMDVEGTDG 150 Query: 182 RERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFS--- 352 RERGED FE++SALF+LA ++++++N+W H IG AN LLKTVF+V + LF Sbjct: 151 RERGEDQD-FERKSALFSLASTEVLIVNLWEHQIGLYNGANMGLLKTVFEVNLGLFGGGG 209 Query: 353 -------PRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 KT +LFVIRD TP+ +L L +D+++IWD + P Sbjct: 210 DNTKPKPQEKTLILFVIRDHVGATPMSNLTATLTQDMERIWDSLSKP 256
>SEY1_SCHPO (Q9UTE0) Protein sey1| Length = 762 Score = 143 bits (361), Expect = 2e-34 Identities = 78/159 (49%), Positives = 111/159 (69%), Gaps = 3/159 (1%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCTLVMDLEGTDG 181 +++G QS+GKSTLLN+LF T+F MDA + R QTTKGIW++KA+N LVMD+EGTDG Sbjct: 43 AVLGSQSTGKSTLLNNLFGTSFSVMDASK-RQQTTKGIWLSKANNSP--ILVMDVEGTDG 99 Query: 182 RERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRK 361 RERGED FE++SALF+++ S+++++NMW + +G Q +N LLKTV +V ++LF +K Sbjct: 100 RERGEDQD-FERKSALFSISTSEVIIVNMWENQVGLYQGSNMALLKTVLEVNLQLFHNKK 158 Query: 362 TTML--FVIRD-KSKTPLEDLEPILREDIQKIWDGVPNP 469 L FVIRD T +E+L + D+ IW + P Sbjct: 159 ERCLLQFVIRDFLGNTSMENLADTIMTDLNNIWASLSKP 197
>SEY1_YEAST (Q99287) Protein SEY1 (Synthetic enhancer of YOP1 protein)| Length = 776 Score = 142 bits (358), Expect = 4e-34 Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 14/170 (8%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMA---------KAHNIEPCTL 154 S+ G QSSGKSTLLN LF TNF MDA R QTTKGIW+A + N P Sbjct: 41 SVFGSQSSGKSTLLNVLFNTNFDTMDAQVKRQQTTKGIWLAHTKQVNTTIEIDNDRPDIF 100 Query: 155 VMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQV 334 V+D+EG+DG ERGED FE+++ALFA+AVS+++++NMW IG Q N LLKTVF+V Sbjct: 101 VLDVEGSDGSERGEDQD-FERKAALFAIAVSEVLIVNMWEQQIGLYQGNNMALLKTVFEV 159 Query: 335 MMRLF----SPRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 + LF + K +LFVIRD TPL L + +++KIW + P Sbjct: 160 NLSLFGKNDNDHKVLLLFVIRDHVGVTPLSSLSDSVTRELEKIWTELSKP 209
>SEY1_KLULA (Q6CJ97) Protein SEY1| Length = 786 Score = 141 bits (356), Expect = 7e-34 Identities = 81/170 (47%), Positives = 110/170 (64%), Gaps = 14/170 (8%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIE---------PCTL 154 S+ G QSSGKSTLLN LF T F MDA R QTT+GIW++ + NI P Sbjct: 42 SVFGSQSSGKSTLLNKLFDTKFDTMDAQVKRQQTTRGIWLSHSANIYSSGAANQSIPDFF 101 Query: 155 VMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQV 334 V+D+EG+DG ERGED FE+++ALFAL+VS+++++NMW + +G Q N LLKTVF+V Sbjct: 102 VLDVEGSDGAERGEDQD-FERKAALFALSVSEVLIVNMWENQVGLYQGNNMGLLKTVFEV 160 Query: 335 MMRLF----SPRKTTMLFVIRD-KSKTPLEDLEPILREDIQKIWDGVPNP 469 + LF + K +LFVIRD +TPLE LE L +++K+W + P Sbjct: 161 NLSLFGKNENRHKVALLFVIRDFTGQTPLESLEASLVLELEKMWSQLSKP 210
>SEY1_CANGA (Q6FLC5) Protein SEY1| Length = 783 Score = 139 bits (349), Expect = 5e-33 Identities = 79/170 (46%), Positives = 107/170 (62%), Gaps = 14/170 (8%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNI---------EPCTL 154 S+ G QSSGKSTLLN LF T F MDA R QTTKGIW+A N+ + Sbjct: 40 SVFGSQSSGKSTLLNILFNTQFDTMDAQVKRQQTTKGIWLAHTQNVNNHKSTTDTDSDYF 99 Query: 155 VMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQV 334 ++D+EG+DG ERGED FE+++ALFA++VS+++++NMW IG Q N LLKTVF+V Sbjct: 100 ILDVEGSDGAERGEDQD-FERKAALFAISVSEVLIVNMWEQQIGLYQGNNMGLLKTVFEV 158 Query: 335 MMRLFSPR----KTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 + LF R K +LFVIRD TPL+ L+ L ++++IW + P Sbjct: 159 NLSLFGKRGNDHKVLLLFVIRDHVGVTPLKSLQESLITELEQIWSELNKP 208
>SEY1_CANAL (Q9C0L9) Protein SEY1| Length = 790 Score = 135 bits (340), Expect = 5e-32 Identities = 80/174 (45%), Positives = 104/174 (59%), Gaps = 18/174 (10%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCT---------L 154 S+ G QS+GKSTLLN LF TNF MD R QTTKGIW+A + + L Sbjct: 62 SVFGSQSTGKSTLLNRLFNTNFDVMDE-SNRQQTTKGIWLAYSPVVSTTLGHTTSKSNIL 120 Query: 155 VMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQV 334 VMD+EGTDGRERGED FE+++ALFAL+ S++++IN+W +G Q AN LLKTVF+V Sbjct: 121 VMDVEGTDGRERGEDQD-FERKAALFALSTSEVLIINIWETQVGLYQGANMGLLKTVFEV 179 Query: 335 MMRLF--------SPRKTTMLFVIRDK-SKTPLEDLEPILREDIQKIWDGVPNP 469 + LF + K +L VIRD TP+E L D+Q +W + P Sbjct: 180 NLSLFGKSKLETHNDHKVLLLIVIRDHVGVTPVESLAKTFTSDLQNMWSSLAKP 233
>SEY1_ASHGO (Q74ZD5) Protein SEY1| Length = 791 Score = 134 bits (337), Expect = 1e-31 Identities = 76/169 (44%), Positives = 103/169 (60%), Gaps = 13/169 (7%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCT--------LV 157 S+ G QSSGKSTLLN LF T F M+A R QTTKGIW+A ++ V Sbjct: 47 SVFGSQSSGKSTLLNALFNTKFDTMNAQVKRQQTTKGIWIAHTREVQTTANTGKGVDFFV 106 Query: 158 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 337 +D+EG+DG ERGED FE+++ALFALA S+++++NMW +G Q N LLKTVF+V Sbjct: 107 LDVEGSDGAERGEDKD-FERKAALFALATSEVLIVNMWEQQVGLYQGNNMGLLKTVFEVN 165 Query: 338 MRLF----SPRKTTMLFVIRD-KSKTPLEDLEPILREDIQKIWDGVPNP 469 + LF +K +LFV+RD TPL L+ L ++Q +W + P Sbjct: 166 LSLFGHKKDKQKILLLFVVRDFTGFTPLSSLQETLTNELQAMWSELNKP 214
>ATR_CAEEL (Q22258) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia| telangiectasia and Rad3-related protein homolog) (ATR homolog) (ATM-like protein 1) (Ce-atl-1) Length = 2531 Score = 32.0 bits (71), Expect = 0.82 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -3 Query: 364 CFARTE*SHHDLENSLQKRLVRSLFSPNIMTPHIDQ 257 CFA +HH L N L R++RSL S + PH Q Sbjct: 383 CFATEIEAHHSLNNPLWPRILRSLLS--VQNPHCQQ 416
>SEP10_RAT (Q5PQK1) Septin-10| Length = 456 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2 Query: 8 MGPQSSGKSTLLNHLFRTNFREMDA 82 +G GKSTL+N LF TNF E+++ Sbjct: 49 VGETGIGKSTLINTLFNTNFEELES 73
>SEP10_MOUSE (Q8C650) Septin-10| Length = 452 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2 Query: 8 MGPQSSGKSTLLNHLFRTNFREMDA 82 +G GKSTL+N LF TNF E+++ Sbjct: 45 VGETGIGKSTLINTLFNTNFEELES 69
>SPRL_LISMO (Q8Y8K2) Protein sprT-like| Length = 155 Score = 30.8 bits (68), Expect = 1.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 53 FRTNFREMDAFRGRSQTTKGIWMAKAHNIE 142 F+ FR F R +TT G ++ K+HNIE Sbjct: 18 FQKEFRHQAVFNARLRTTGGRYLLKSHNIE 47
>SPRL_LISMF (Q721R7) Protein sprT-like| Length = 155 Score = 30.8 bits (68), Expect = 1.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 53 FRTNFREMDAFRGRSQTTKGIWMAKAHNIE 142 F+ FR F R +TT G ++ K+HNIE Sbjct: 18 FQKEFRHQAVFNARLRTTGGRYLLKSHNIE 47
>PHLPL_HUMAN (Q6ZVD8) PH domain leucine-rich repeat protein phosphatase-like (EC| 3.1.3.16) Length = 1323 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -2 Query: 245 KQPKQIMHSASQRLCHPLPSLFHQCLPNPLQGCMVQYYGPSP 120 ++P QI++ RL P + NP GCM+++YG P Sbjct: 101 ERPLQIVYDYLSRLGFDDPVRIQEEATNPDLGCMIRFYGEKP 142
>ZFYV1_MOUSE (Q810J8) Zinc finger FYVE domain-containing protein 1| Length = 777 Score = 30.4 bits (67), Expect = 2.4 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMA--KAHNIEPCTLVMDLEGT 175 S+ G GKS LNH F + + T G+W A H + V+D EG Sbjct: 184 SVFGNTGDGKSHTLNHTFFYSREVFKTSPAQESCTVGVWAAYDPVHKV----AVIDTEGL 239 Query: 176 DGRERGEDDTAFEKQSALFALAVSDIVL 259 G + + + L LA+SD+V+ Sbjct: 240 LG---ATVNLSQRTRLLLKVLAISDLVI 264
>SPRL_LISIN (Q92DB7) Protein sprT-like| Length = 155 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 53 FRTNFREMDAFRGRSQTTKGIWMAKAHNIE 142 F+ FR F R +TT G ++ K+HNIE Sbjct: 18 FQKEFRHQAVFNTRLRTTGGRYLLKSHNIE 47
>ZN179_RAT (O70418) Zinc finger protein 179 (Brain finger protein)| Length = 631 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 14/54 (25%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFR--TNFREMDAFRGRSQ------------TTKGIWM 121 +++G Q SGKS LL+HL R D+ R R++ T+GIWM Sbjct: 173 AVLGEQHSGKSFLLDHLLRGLPGLESGDSTRPRAEGSLPGIRWGANGLTRGIWM 226
>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)| Length = 610 Score = 29.6 bits (65), Expect = 4.1 Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 9/157 (5%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCTLVMDLEGTDG 181 +++G QSSGKS++L + +F RG T+ + + H I+ +G Sbjct: 38 AVVGGQSSGKSSVLESVVGKDFLP----RGAGIVTRRPLVLQLHRID-----------EG 82 Query: 182 RERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRK 361 +E E +K+ FA +I + RE + ++ TV + + +FSP Sbjct: 83 KEYAEFMHLPKKKFTDFAAVRQEI------SDETDRETGRSSKVISTV-PIHLSIFSPNV 135 Query: 362 TTMLFV---------IRDKSKTPLEDLEPILREDIQK 445 + V + + ++ ++D+E ++R I+K Sbjct: 136 VNLTLVDLPGLTKVAVDGQPESIVQDIENMVRSFIEK 172
>ENGA_TREPA (P96128) GTP-binding protein engA| Length = 460 Score = 29.6 bits (65), Expect = 4.1 Identities = 24/93 (25%), Positives = 47/93 (50%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMAKAHNIEPCTLVMDLEGTDG 181 +I+G ++GKSTL+N+L R R + R+ TT+ + + ++ D G Sbjct: 201 AIVGKPNTGKSTLMNYLMR---RTVSLVCDRAGTTRDVVTGHVEFKQYKFIIADTAGI-- 255 Query: 182 RERGEDDTAFEKQSALFALAVSDIVLINMWCHD 280 R+R + + E S + A+++ + V I ++ D Sbjct: 256 RKRQKVYESIEYYSVIRAISILNAVDIVLYIVD 288
>ZFYV1_HUMAN (Q9HBF4) Zinc finger FYVE domain-containing protein 1 (Double| FYVE-containing protein 1) (Tandem FYVE fingers-1) (SR3) Length = 777 Score = 29.6 bits (65), Expect = 4.1 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMA--KAHNIEPCTLVMDLEGT 175 SI G GKS LNH F + T G+W A H + V+D EG Sbjct: 184 SIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKV----AVIDTEGL 239 Query: 176 DGRERGEDDTAFEKQSALFALAVSDIVL 259 G + + + L LA+SD+V+ Sbjct: 240 LG---ATVNLSQRTRLLLKVLAISDLVI 264
>TRME_HELPJ (Q9ZJG6) Probable tRNA modification GTPase trmE| Length = 461 Score = 29.6 bits (65), Expect = 4.1 Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 1/155 (0%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQ-TTKGIWMAKAHNIEPCTLVMDLEGTD 178 SI+G ++GKS+LLN + + +G ++ T + + K H + ++D G Sbjct: 228 SIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVR----LIDTAGI- 282 Query: 179 GRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPR 358 RE ++ + +L +L DI+L D+ +KPL K F +M L + Sbjct: 283 -RESADEIERLGIEKSLKSLENCDIIL---GVFDL------SKPLEKEDFNLMDTLNRTK 332 Query: 359 KTTMLFVIRDKSKTPLEDLEPILREDIQKIWDGVP 463 K ++ + ++ DL P L +I K + +P Sbjct: 333 KPCIVVLNKN-------DLAPKLELEILKSYLKIP 360
>ORC4_MOUSE (O88708) Origin recognition complex subunit 4| Length = 433 Score = 28.9 bits (63), Expect = 6.9 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 Query: 5 IMGPQSSGKSTLLNHLFR 58 I+GP+ SGK+TLLNH + Sbjct: 63 IVGPRGSGKTTLLNHALK 80
>SPN2_SCHPO (Q09116) Septin homolog spn2| Length = 331 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 5 IMGPQSSGKSTLLNHLFRTNFRE 73 ++GP SGKSTL+N LF + + Sbjct: 37 VVGPSGSGKSTLINTLFSAHLMD 59
>RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-protein kinase 3 (EC| 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) Length = 518 Score = 28.5 bits (62), Expect = 9.1 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +1 Query: 283 WERTGCEQASFEDCFPGHDEIIQSSQNN 366 W ++ SF++C P DE+ Q +NN Sbjct: 266 WSSEPKDRPSFQECLPKTDEVFQMVENN 293
>Y796_METJA (Q58206) ABC transporter ATP-binding protein MJ0796| Length = 235 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 2 SIMGPQSSGKSTLLN 46 SIMGP SGKST+LN Sbjct: 35 SIMGPSGSGKSTMLN 49
>PHNC_SHIFL (Q83P97) Phosphonates import ATP-binding protein phnC (EC| 3.6.3.28) Length = 262 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHL 52 +++GP SGKSTLL HL Sbjct: 34 ALLGPSGSGKSTLLRHL 50
>PHNC_ECOLI (P16677) Phosphonates import ATP-binding protein phnC (EC| 3.6.3.28) Length = 262 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHL 52 +++GP SGKSTLL HL Sbjct: 34 ALLGPSGSGKSTLLRHL 50
>PHNC_ECOL6 (Q8FAV1) Phosphonates import ATP-binding protein phnC (EC| 3.6.3.28) Length = 262 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHL 52 +++GP SGKSTLL HL Sbjct: 34 ALLGPSGSGKSTLLRHL 50
>PHNC_ECO57 (Q8XDV7) Phosphonates import ATP-binding protein phnC (EC| 3.6.3.28) Length = 262 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +2 Query: 2 SIMGPQSSGKSTLLNHL 52 +++GP SGKSTLL HL Sbjct: 34 ALLGPSGSGKSTLLRHL 50 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,111,069 Number of Sequences: 219361 Number of extensions: 1540197 Number of successful extensions: 5678 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5491 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5623 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
