Clone Name | bastl30b01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 325 bits (164), Expect = 8e-86 Identities = 256/284 (90%), Gaps = 2/284 (0%) Strand = Plus / Plus Query: 227 aggaaccgtctacgtttgctgacacaattcttggagcacttagtgagcgagggtgcccaa 286 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 254968 aggaaccgcctacggctgctgacacaatttttggagcacttagtgagcgagggtagccaa 255027 Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 255028 gatgtccatgtgcacaatgctcttggaaaaatcatcattgacagcaacaataatcctgag 255087 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 || |||||||| ||||| ||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 255088 cacttccttaccaccaatccattttatgactctcgcgtggtcggtaaatactgtgaaaag 255147 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 255148 cgggatcctacccttgctgttgttgcttacagacgtggacagtgtgatgatgaacttatt 255207 Query: 467 aatgttaccaa-caaaactcgctgttcaagctgc-agctaggta 508 ||||| ||||| ||||||| ||||||||||||| ||||||||| Sbjct: 255208 aatgtcaccaataaaaactcactgttcaagctgcaagctaggta 255251 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 |||||||||||||||||||||| || || || || ||| |||||||||| |||||||| | Sbjct: 254713 aggtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctg 254772 Query: 150 aagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactgg 209 ||||||||||||||||||||||| ||||||| || ||||| |||||||| |||||||| | Sbjct: 254773 aagatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactag 254832 Query: 210 ttgatgaatgcgagaagagg 229 |||||||||||||||||||| Sbjct: 254833 ttgatgaatgcgagaagagg 254852 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||||||||||||||| |||||||||||| | || ||||||||||| ||||| ||||| Sbjct: 254536 tgtctgcgaccgctttggatttgttccagatttgacccactatctgtatacaaataatat 254595 Query: 61 gctccgatacatcgaaggctatgtacagaa 90 ||| || || || ||||||||||||||||| Sbjct: 254596 gcttcggtatattgaaggctatgtacagaa 254625
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 325 bits (164), Expect = 8e-86 Identities = 256/284 (90%), Gaps = 2/284 (0%) Strand = Plus / Plus Query: 227 aggaaccgtctacgtttgctgacacaattcttggagcacttagtgagcgagggtgcccaa 286 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 239575 aggaaccgcctacggctgctgacacaatttttggagcacttagtgagcgagggtagccaa 239634 Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 239635 gatgtccatgtgcacaatgctcttggaaaaatcatcattgacagcaacaataatcctgag 239694 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 || |||||||| ||||| ||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 239695 cacttccttaccaccaatccattttatgactctcgcgtggtcggtaaatactgtgaaaag 239754 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 239755 cgggatcctacccttgctgttgttgcttacagacgtggacagtgtgatgatgaacttatt 239814 Query: 467 aatgttaccaa-caaaactcgctgttcaagctgc-agctaggta 508 ||||| ||||| ||||||| ||||||||||||| ||||||||| Sbjct: 239815 aatgtcaccaataaaaactcactgttcaagctgcaagctaggta 239858 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 |||||||||||||||||||||| || || || || ||| |||||||||| |||||||| | Sbjct: 239320 aggtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctg 239379 Query: 150 aagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactgg 209 ||||||||||||||||||||||| ||||||| || ||||| |||||||| |||||||| | Sbjct: 239380 aagatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactag 239439 Query: 210 ttgatgaatgcgagaagagg 229 |||||||||||||||||||| Sbjct: 239440 ttgatgaatgcgagaagagg 239459 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||||||||||||||| |||||||||||| | || ||||||||||| ||||| ||||| Sbjct: 239143 tgtctgcgaccgctttggatttgttccagatttgacccactatctgtatacaaataatat 239202 Query: 61 gctccgatacatcgaaggctatgtacagaa 90 ||| || || || ||||||||||||||||| Sbjct: 239203 gcttcggtatattgaaggctatgtacagaa 239232
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 325 bits (164), Expect = 8e-86 Identities = 256/284 (90%), Gaps = 2/284 (0%) Strand = Plus / Plus Query: 227 aggaaccgtctacgtttgctgacacaattcttggagcacttagtgagcgagggtgcccaa 286 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 239575 aggaaccgcctacggctgctgacacaatttttggagcacttagtgagcgagggtagccaa 239634 Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 239635 gatgtccatgtgcacaatgctcttggaaaaatcatcattgacagcaacaataatcctgag 239694 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 || |||||||| ||||| ||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 239695 cacttccttaccaccaatccattttatgactctcgcgtggtcggtaaatactgtgaaaag 239754 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 239755 cgggatcctacccttgctgttgttgcttacagacgtggacagtgtgatgatgaacttatt 239814 Query: 467 aatgttaccaa-caaaactcgctgttcaagctgc-agctaggta 508 ||||| ||||| ||||||| ||||||||||||| ||||||||| Sbjct: 239815 aatgtcaccaataaaaactcactgttcaagctgcaagctaggta 239858 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 |||||||||||||||||||||| || || || || ||| |||||||||| |||||||| | Sbjct: 239320 aggtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctg 239379 Query: 150 aagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactgg 209 ||||||||||||||||||||||| ||||||| || ||||| |||||||| |||||||| | Sbjct: 239380 aagatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactag 239439 Query: 210 ttgatgaatgcgagaagagg 229 |||||||||||||||||||| Sbjct: 239440 ttgatgaatgcgagaagagg 239459 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||||||||||||||| |||||||||||| | || ||||||||||| ||||| ||||| Sbjct: 239143 tgtctgcgaccgctttggatttgttccagatttgacccactatctgtatacaaataatat 239202 Query: 61 gctccgatacatcgaaggctatgtacagaa 90 ||| || || || ||||||||||||||||| Sbjct: 239203 gcttcggtatattgaaggctatgtacagaa 239232
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 325 bits (164), Expect = 8e-86 Identities = 256/284 (90%), Gaps = 2/284 (0%) Strand = Plus / Plus Query: 227 aggaaccgtctacgtttgctgacacaattcttggagcacttagtgagcgagggtgcccaa 286 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 254968 aggaaccgcctacggctgctgacacaatttttggagcacttagtgagcgagggtagccaa 255027 Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 255028 gatgtccatgtgcacaatgctcttggaaaaatcatcattgacagcaacaataatcctgag 255087 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 || |||||||| ||||| ||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 255088 cacttccttaccaccaatccattttatgactctcgcgtggtcggtaaatactgtgaaaag 255147 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 255148 cgggatcctacccttgctgttgttgcttacagacgtggacagtgtgatgatgaacttatt 255207 Query: 467 aatgttaccaa-caaaactcgctgttcaagctgc-agctaggta 508 ||||| ||||| ||||||| ||||||||||||| ||||||||| Sbjct: 255208 aatgtcaccaataaaaactcactgttcaagctgcaagctaggta 255251 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 |||||||||||||||||||||| || || || || ||| |||||||||| |||||||| | Sbjct: 254713 aggtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctg 254772 Query: 150 aagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactgg 209 ||||||||||||||||||||||| ||||||| || ||||| |||||||| |||||||| | Sbjct: 254773 aagatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactag 254832 Query: 210 ttgatgaatgcgagaagagg 229 |||||||||||||||||||| Sbjct: 254833 ttgatgaatgcgagaagagg 254852 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||||||||||||||| |||||||||||| | || ||||||||||| ||||| ||||| Sbjct: 254536 tgtctgcgaccgctttggatttgttccagatttgacccactatctgtatacaaataatat 254595 Query: 61 gctccgatacatcgaaggctatgtacagaa 90 ||| || || || ||||||||||||||||| Sbjct: 254596 gcttcggtatattgaaggctatgtacagaa 254625
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 325 bits (164), Expect = 8e-86 Identities = 256/284 (90%), Gaps = 2/284 (0%) Strand = Plus / Minus Query: 227 aggaaccgtctacgtttgctgacacaattcttggagcacttagtgagcgagggtgcccaa 286 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 65418 aggaaccgcctacggctgctgacacaatttttggagcacttagtgagcgagggtagccaa 65359 Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 65358 gatgtccatgtgcacaatgctcttggaaaaatcatcattgacagcaacaataatcctgag 65299 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 || |||||||| ||||| ||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 65298 cacttccttaccaccaatccattttatgactctcgcgtggtcggtaaatactgtgaaaag 65239 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 65238 cgggatcctacccttgctgttgttgcttacagacgtggacagtgtgatgatgaacttatt 65179 Query: 467 aatgttaccaa-caaaactcgctgttcaagctgc-agctaggta 508 ||||| ||||| ||||||| ||||||||||||| ||||||||| Sbjct: 65178 aatgtcaccaataaaaactcactgttcaagctgcaagctaggta 65135 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Minus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 |||||||||||||||||||||| || || || || ||| |||||||||| |||||||| | Sbjct: 65673 aggtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctg 65614 Query: 150 aagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactgg 209 ||||||||||||||||||||||| ||||||| || ||||| |||||||| |||||||| | Sbjct: 65613 aagatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactag 65554 Query: 210 ttgatgaatgcgagaagagg 229 |||||||||||||||||||| Sbjct: 65553 ttgatgaatgcgagaagagg 65534 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||||||||||||||| |||||||||||| | || ||||||||||| ||||| ||||| Sbjct: 65850 tgtctgcgaccgctttggatttgttccagatttgacccactatctgtatacaaataatat 65791 Query: 61 gctccgatacatcgaaggctatgtacagaa 90 ||| || || || ||||||||||||||||| Sbjct: 65790 gcttcggtatattgaaggctatgtacagaa 65761
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 96667 Score = 325 bits (164), Expect = 8e-86 Identities = 256/284 (90%), Gaps = 2/284 (0%) Strand = Plus / Minus Query: 227 aggaaccgtctacgtttgctgacacaattcttggagcacttagtgagcgagggtgcccaa 286 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 20288 aggaaccgcctacggctgctgacacaatttttggagcacttagtgagcgagggtagccaa 20229 Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 20228 gatgtccatgtgcacaatgctcttggaaaaatcatcattgacagcaacaataatcctgag 20169 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 || |||||||| ||||| ||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 20168 cacttccttaccaccaatccattttatgactctcgcgtggtcggtaaatactgtgaaaag 20109 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 20108 cgggatcctacccttgctgttgttgcttacagacgtggacagtgtgatgatgaacttatt 20049 Query: 467 aatgttaccaa-caaaactcgctgttcaagctgc-agctaggta 508 ||||| ||||| ||||||| ||||||||||||| ||||||||| Sbjct: 20048 aatgtcaccaataaaaactcactgttcaagctgcaagctaggta 20005 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Minus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 |||||||||||||||||||||| || || || || ||| |||||||||| |||||||| | Sbjct: 20543 aggtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctg 20484 Query: 150 aagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactgg 209 ||||||||||||||||||||||| ||||||| || ||||| |||||||| |||||||| | Sbjct: 20483 aagatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactag 20424 Query: 210 ttgatgaatgcgagaagagg 229 |||||||||||||||||||| Sbjct: 20423 ttgatgaatgcgagaagagg 20404 Score = 99.6 bits (50), Expect = 9e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||||||||||||||| |||||||||||| | || ||||||||||| ||||| ||||| Sbjct: 20720 tgtctgcgaccgctttggatttgttccagatttgacccactatctgtatacaaataatat 20661 Query: 61 gctccgatacatcgaaggctatgtacagaa 90 ||| || || || ||||||||||||||||| Sbjct: 20660 gcttcggtatattgaaggctatgtacagaa 20631
>ref|NM_111688.4| Arabidopsis thaliana structural molecule AT3G08530 mRNA, complete cds Length = 5477 Score = 202 bits (102), Expect = 8e-49 Identities = 377/466 (80%), Gaps = 2/466 (0%) Strand = Plus / Plus Query: 18 gctttgttccagatcttactcactatctgtacacaaacaatatgctccgatacatcgaag 77 ||||||| || ||||||||||| || || ||||||||||| ||||| || ||||| |||| Sbjct: 2387 gctttgtgcctgatcttactcattacctctacacaaacaacatgcttcgttacattgaag 2446 Query: 78 gctatgtacagaaggtgaaccctggaaatgctccgttggtagtggggcagttacttgatg 137 |||| || ||||||||||||||||| |||||||| || || || |||||||| ||||||| Sbjct: 2447 gctacgtgcagaaggtgaaccctgggaatgctcccttagttgtcgggcagttgcttgatg 2506 Query: 138 acgagtgcccggaagatttcattaagggtttgattttgtctgttcgatctcttcttcctg 197 | || ||||| |||||||| || || || | ||| | |||||||| || | ||||||| Sbjct: 2507 atgaatgccctgaagattttataaaaggcctcattctctctgttcgttcattgcttcctg 2566 Query: 198 tcgagccactggttgatgaatgcgagaagaggaaccgtctacgtttgctgacacaattct 257 | || ||||| || || ||||| |||||||| || || || ||| | || || || |||| Sbjct: 2567 ttgaaccacttgtcgaggaatgtgagaagagaaatcgactccgtctcctcactcagttct 2626 Query: 258 tggagcacttagtgagcgagggtgcccaagatgtgcatgtccacaatgctcttggg-aaa 316 ||||||| ||||| || ||||| |||||||||||||||||| ||||| |||||| ||| Sbjct: 2627 tggagcatttagttagtgagggaagccaagatgtgcatgtccataatgc-cttgggtaaa 2685 Query: 317 attatcattgacagcaacaacaatcctgagcatttccttactaccaacccattctatgac 376 |||||||| ||||| |||||||| |||||||||||||| || |||||||| | ||| ||| Sbjct: 2686 attatcatagacagtaacaacaaccctgagcatttcctgaccaccaacccttactacgac 2745 Query: 377 tcccgtgtggtgggtaaatactgtgaaaagagggatcctactcttgctgttgttgcttac 436 || || |||||||| ||||| || || | |||||||| || || ||||| || ||| Sbjct: 2746 tctaaggttgtgggtaagtactgcgagaaacgtgatcctaccctagcagttgtggcatac 2805 Query: 437 agacgtggacagtgcgatgaagaacttatcaatgttaccaacaaaa 482 ||| | ||||| || || || ||||| |||||||| || ||||||| Sbjct: 2806 agaagaggacaatgtgacgaggaactcatcaatgtcactaacaaaa 2851
>ref|NM_111950.2| Arabidopsis thaliana structural molecule AT3G11130 mRNA, complete cds Length = 5785 Score = 184 bits (93), Expect = 2e-43 Identities = 386/481 (80%), Gaps = 2/481 (0%) Strand = Plus / Plus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||| || || ||||||||||| || ||||||||||| || || ||||||||||| || Sbjct: 2611 tgtctgtgatcgttttggctttgtacctgatcttactcattacctctacacaaacaacat 2670 Query: 61 gctccgatacatcgaaggctatgtacagaaggtgaaccctggaaatgctccgttggtagt 120 ||| || ||||| ||||| || || ||||||||||| ||||| |||||||| || || || Sbjct: 2671 gctgcgttacattgaaggttacgttcagaaggtgaatcctgggaatgctcccttagttgt 2730 Query: 121 ggggcagttacttgatgacgagtgcccggaagatttcattaagggtttgattttgtctgt 180 ||||||||| ||||||||||| ||||| |||||||| || || || | ||| | ||||| Sbjct: 2731 ggggcagttgcttgatgacgaatgccctgaagattttataaaaggcctcattctttctgt 2790 Query: 181 tcgatctcttcttcctgtcgagccactggttgatgaatgcgagaagaggaaccgtctacg 240 ||| || | |||||||| || || || |||| ||||| || ||||| || || || || Sbjct: 2791 tcgttcattacttcctgttgaaccccttgttgcagaatgtgaaaagagaaatcgactccg 2850 Query: 241 tttgctgacacaattcttggagcacttagtgagcgagggtgcccaagatgtgcatgtcca 300 | | || || || ||||||||||| |||| || ||||| |||||||||||||||||| Sbjct: 2851 tctcctcactcagttcttggagcatctagttagtgagggaagccaagatgtgcatgtcca 2910 Query: 301 caatgctcttggg-aaaattatcattgacagcaacaacaatcctgagcatttccttacta 359 ||||| |||||| ||||||||||| ||||| |||||||| || ||||||||||| || | Sbjct: 2911 taatgc-cttgggtaaaattatcatagacagtaacaacaaccccgagcatttcctgacca 2969 Query: 360 ccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaagagggatcctactc 419 |||| || | ||| ||||| || |||||||| ||||| || || | ||||| |||| Sbjct: 2970 ccaatccttactacgactctaaggttgtgggtaagtactgcgagaaacgtgatcccactc 3029 Query: 420 ttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatcaatgttaccaaca 479 | |||||||| || |||||| | ||||| || || || ||||| |||||||| ||||||| Sbjct: 3030 tggctgttgtggcatacagaagaggacaatgtgacgaggaactcatcaatgtcaccaaca 3089 Query: 480 a 480 | Sbjct: 3090 a 3090
>gb|U42608.1|GMU42608 Glycine max clathrin heavy chain mRNA, complete cds Length = 5537 Score = 157 bits (79), Expect = 4e-35 Identities = 376/475 (79%) Strand = Plus / Plus Query: 8 gaccgctttggctttgttccagatcttactcactatctgtacacaaacaatatgctccga 67 ||||| ||||| |||||||| ||||| || |||||||| ||||||||||| ||||| || Sbjct: 2473 gaccgatttggatttgttccggatctaacacactatctatacacaaacaacatgcttcgt 2532 Query: 68 tacatcgaaggctatgtacagaaggtgaaccctggaaatgctccgttggtagtggggcag 127 ||||| ||||| ||||| |||||||||||||| || |||||||| || || || |||||| Sbjct: 2533 tacattgaaggttatgttcagaaggtgaacccagggaatgctcctttagtcgttgggcag 2592 Query: 128 ttacttgatgacgagtgcccggaagatttcattaagggtttgattttgtctgttcgatct 187 | | ||||| || || || |||||||| || || || |||||| | |||||||| || Sbjct: 2593 cttttagatgatgaatgtccagaagattttatcaaaggcttgattctctctgttcgctcc 2652 Query: 188 cttcttcctgtcgagccactggttgatgaatgcgagaagaggaaccgtctacgtttgctg 247 | || || || ||||| || || || || || ||||||||||| || || |||||||| Sbjct: 2653 ttactgccagtggagccccttgtggaggagtgtgagaagaggaatcggcttcgtttgctt 2712 Query: 248 acacaattcttggagcacttagtgagcgagggtgcccaagatgtgcatgtccacaatgct 307 ||||| || ||||| || | || || ||||| ||| ||||| ||||| |||||||| Sbjct: 2713 acacagtttttggaacatcttgtaagtgagggaagccaggatgtacatgttcacaatgca 2772 Query: 308 cttgggaaaattatcattgacagcaacaacaatcctgagcatttccttactaccaaccca 367 || || ||||| |||||||| |||||||||||||| || ||||| || |||||||||||| Sbjct: 2773 ctgggtaaaatcatcattgatagcaacaacaatccggaacattttctcactaccaaccca 2832 Query: 368 ttctatgactcccgtgtggtgggtaaatactgtgaaaagagggatcctactcttgctgtt 427 | |||||| || || || ||||| ||||| ||||| || | ||||| || | || ||| Sbjct: 2833 tactatgattctcgggttgtgggaaaatattgtgagaaacgtgatcccaccttggcagtt 2892 Query: 428 gttgcttacagacgtggacagtgcgatgaagaacttatcaatgttaccaacaaaa 482 || ||||| || || |||| || ||||| || ||||||||||| || ||||||| Sbjct: 2893 gtagcttataggcggggactatgtgatgacgagcttatcaatgtgacaaacaaaa 2947
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 107 bits (54), Expect = 4e-20 Identities = 188/230 (81%), Gaps = 2/230 (0%) Strand = Plus / Minus Query: 254 ttcttggagcacttagtgagcgagggtgcccaagatgtgcatgtccacaatgctcttggg 313 ||||||||||| ||||| || ||||| |||||||||||||||||| ||||| |||||| Sbjct: 1303 ttcttggagcatttagttagtgagggaagccaagatgtgcatgtccataatgc-cttggg 1245 Query: 314 -aaaattatcattgacagcaacaacaatcctgagcatttccttactaccaacccattcta 372 ||||||||||| ||||| |||||||| |||||||||||||| || |||||||| | ||| Sbjct: 1244 taaaattatcatagacagtaacaacaaccctgagcatttcctgaccaccaacccttacta 1185 Query: 373 tgactcccgtgtggtgggtaaatactgtgaaaagagggatcctactcttgctgttgttgc 432 ||||| || |||||||| ||||| || || | |||||||| || || ||||| || Sbjct: 1184 cgactctaaggttgtgggtaagtactgcgagaaacgtgatcctaccctagcagttgtggc 1125 Query: 433 ttacagacgtggacagtgcgatgaagaacttatcaatgttaccaacaaaa 482 |||||| | ||||| || || || ||||| |||||||| || ||||||| Sbjct: 1124 atacagaagaggacaatgtgacgaggaactcatcaatgtcactaacaaaa 1075 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 89 aaggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccg 148 |||||||||||||| |||||||| || || || |||||||| |||||||| || ||||| Sbjct: 1552 aaggtgaaccctgggaatgctcccttagttgtcgggcagttgcttgatgatgaatgccct 1493 Query: 149 gaagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactg 208 |||||||| || || || | ||| | |||||||| || | |||||||| || ||||| Sbjct: 1492 gaagattttataaaaggcctcattctctctgttcgttcattgcttcctgttgaaccactt 1433 Query: 209 gttgatgaatgcgagaagagg 229 || || ||||| ||||||||| Sbjct: 1432 gtcgaggaatgtgagaagagg 1412 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 18 gctttgttccagatcttactcactatctgtacacaaacaatatgctccgatacatcgaag 77 ||||||| || ||||||||||| || || ||||||||||| ||||| || ||||| |||| Sbjct: 1707 gctttgtgcctgatcttactcattacctctacacaaacaacatgcttcgttacattgaag 1648 Query: 78 gctatgtacagaaggt 93 |||| || |||||||| Sbjct: 1647 gctacgtgcagaaggt 1632
>gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BAC T8G24 genomic sequence, complete sequence Length = 29605 Score = 107 bits (54), Expect = 4e-20 Identities = 188/230 (81%), Gaps = 2/230 (0%) Strand = Plus / Minus Query: 254 ttcttggagcacttagtgagcgagggtgcccaagatgtgcatgtccacaatgctcttggg 313 ||||||||||| ||||| || ||||| |||||||||||||||||| ||||| |||||| Sbjct: 25866 ttcttggagcatttagttagtgagggaagccaagatgtgcatgtccataatgc-cttggg 25808 Query: 314 -aaaattatcattgacagcaacaacaatcctgagcatttccttactaccaacccattcta 372 ||||||||||| ||||| |||||||| |||||||||||||| || |||||||| | ||| Sbjct: 25807 taaaattatcatagacagtaacaacaaccctgagcatttcctgaccaccaacccttacta 25748 Query: 373 tgactcccgtgtggtgggtaaatactgtgaaaagagggatcctactcttgctgttgttgc 432 ||||| || |||||||| ||||| || || | |||||||| || || ||||| || Sbjct: 25747 cgactctaaggttgtgggtaagtactgcgagaaacgtgatcctaccctagcagttgtggc 25688 Query: 433 ttacagacgtggacagtgcgatgaagaacttatcaatgttaccaacaaaa 482 |||||| | ||||| || || || ||||| |||||||| || ||||||| Sbjct: 25687 atacagaagaggacaatgtgacgaggaactcatcaatgtcactaacaaaa 25638 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Minus Query: 89 aaggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccg 148 |||||||||||||| |||||||| || || || |||||||| |||||||| || ||||| Sbjct: 26115 aaggtgaaccctgggaatgctcccttagttgtcgggcagttgcttgatgatgaatgccct 26056 Query: 149 gaagatttcattaagggtttgattttgtctgttcgatctcttcttcctgtcgagccactg 208 |||||||| || || || | ||| | |||||||| || | |||||||| || ||||| Sbjct: 26055 gaagattttataaaaggcctcattctctctgttcgttcattgcttcctgttgaaccactt 25996 Query: 209 gttgatgaatgcgagaagagg 229 || || ||||| ||||||||| Sbjct: 25995 gtcgaggaatgtgagaagagg 25975 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 18 gctttgttccagatcttactcactatctgtacacaaacaatatgctccgatacatcgaag 77 ||||||| || ||||||||||| || || ||||||||||| ||||| || ||||| |||| Sbjct: 26270 gctttgtgcctgatcttactcattacctctacacaaacaacatgcttcgttacattgaag 26211 Query: 78 gctatgtacagaaggt 93 |||| || |||||||| Sbjct: 26210 gctacgtgcagaaggt 26195
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 95.6 bits (48), Expect = 1e-16 Identities = 185/228 (81%), Gaps = 2/228 (0%) Strand = Plus / Plus Query: 254 ttcttggagcacttagtgagcgagggtgcccaagatgtgcatgtccacaatgctcttggg 313 ||||||||||| |||| || ||||| |||||||||||||||||| ||||| |||||| Sbjct: 30334 ttcttggagcatctagttagtgagggaagccaagatgtgcatgtccataatgc-cttggg 30392 Query: 314 -aaaattatcattgacagcaacaacaatcctgagcatttccttactaccaacccattcta 372 ||||||||||| ||||| |||||||| || ||||||||||| || ||||| || | ||| Sbjct: 30393 taaaattatcatagacagtaacaacaaccccgagcatttcctgaccaccaatccttacta 30452 Query: 373 tgactcccgtgtggtgggtaaatactgtgaaaagagggatcctactcttgctgttgttgc 432 ||||| || |||||||| ||||| || || | ||||| ||||| |||||||| || Sbjct: 30453 cgactctaaggttgtgggtaagtactgcgagaaacgtgatcccactctggctgttgtggc 30512 Query: 433 ttacagacgtggacagtgcgatgaagaacttatcaatgttaccaacaa 480 |||||| | ||||| || || || ||||| |||||||| |||||||| Sbjct: 30513 atacagaagaggacaatgtgacgaggaactcatcaatgtcaccaacaa 30560 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 ||||||| ||||| |||||||| || || ||||||||||| ||||||||||| ||||| | Sbjct: 30086 aggtgaatcctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctg 30145 Query: 150 aagattt 156 ||||||| Sbjct: 30146 aagattt 30152 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||| || || ||||||||||| || ||||||||||| || || ||||||||||| || Sbjct: 29920 tgtctgtgatcgttttggctttgtacctgatcttactcattacctctacacaaacaacat 29979 Query: 61 gctccgatacatcgaaggctatgtacagaaggt 93 ||| || ||||| ||||| || || |||||||| Sbjct: 29980 gctgcgttacattgaaggttacgttcagaaggt 30012
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 95.6 bits (48), Expect = 1e-16 Identities = 185/228 (81%), Gaps = 2/228 (0%) Strand = Plus / Minus Query: 254 ttcttggagcacttagtgagcgagggtgcccaagatgtgcatgtccacaatgctcttggg 313 ||||||||||| |||| || ||||| |||||||||||||||||| ||||| |||||| Sbjct: 22946 ttcttggagcatctagttagtgagggaagccaagatgtgcatgtccataatgc-cttggg 22888 Query: 314 -aaaattatcattgacagcaacaacaatcctgagcatttccttactaccaacccattcta 372 ||||||||||| ||||| |||||||| || ||||||||||| || ||||| || | ||| Sbjct: 22887 taaaattatcatagacagtaacaacaaccccgagcatttcctgaccaccaatccttacta 22828 Query: 373 tgactcccgtgtggtgggtaaatactgtgaaaagagggatcctactcttgctgttgttgc 432 ||||| || |||||||| ||||| || || | ||||| ||||| |||||||| || Sbjct: 22827 cgactctaaggttgtgggtaagtactgcgagaaacgtgatcccactctggctgttgtggc 22768 Query: 433 ttacagacgtggacagtgcgatgaagaacttatcaatgttaccaacaa 480 |||||| | ||||| || || || ||||| |||||||| |||||||| Sbjct: 22767 atacagaagaggacaatgtgacgaggaactcatcaatgtcaccaacaa 22720 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 ||||||| ||||| |||||||| || || ||||||||||| ||||||||||| ||||| | Sbjct: 23194 aggtgaatcctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctg 23135 Query: 150 aagattt 156 ||||||| Sbjct: 23134 aagattt 23128 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 1 tgtctgcgaccgctttggctttgttccagatcttactcactatctgtacacaaacaatat 60 |||||| || || ||||||||||| || ||||||||||| || || ||||||||||| || Sbjct: 23360 tgtctgtgatcgttttggctttgtacctgatcttactcattacctctacacaaacaacat 23301 Query: 61 gctccgatacatcgaaggctatgtacagaaggt 93 ||| || ||||| ||||| || || |||||||| Sbjct: 23300 gctgcgttacattgaaggttacgttcagaaggt 23268
>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a, complete sequence Length = 96704 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Minus Query: 293 catgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgagcatttc 352 ||||| || |||||||| || || || |||||||| ||||||||||| || || ||||| Sbjct: 37170 catgttcataatgctctgggtaagatcatcattgatagcaacaacaacccagaacatttt 37111 Query: 353 cttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaagagggat 412 || ||||| ||||||| |||||| || || || ||||| ||||| |||||||| | ||| Sbjct: 37110 ctcactacaaacccatactatgattctcgagttgtgggaaaatattgtgaaaaacgtgat 37051 Query: 413 cctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatcaatgtt 472 ||||| | || ||||| ||||| || || ||||| || ||||| |||||||||||||| Sbjct: 37050 cctaccttggccgttgtggcttataggcgaggacaatgtgatgatgaacttatcaatgtg 36991 Query: 473 accaacaaaa 482 || ||||||| Sbjct: 36990 acaaacaaaa 36981 Score = 40.1 bits (20), Expect = 6.9 Identities = 77/96 (80%) Strand = Plus / Minus Query: 134 gatgacgagtgcccggaagatttcattaagggtttgattttgtctgttcgatctcttctt 193 ||||| ||||| || |||||||| || || || |||||| | |||||||| || | || Sbjct: 37418 gatgatgagtgtccagaagattttatcaaaggcttgattctctctgttcgttcattgctg 37359 Query: 194 cctgtcgagccactggttgatgaatgcgagaagagg 229 || || ||||||||||| || ||||| ||||||||| Sbjct: 37358 ccggtggagccactggtggaggaatgtgagaagagg 37323
>dbj|AP004467.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06K11, TM0002, complete sequence Length = 106023 Score = 87.7 bits (44), Expect = 3e-14 Identities = 158/196 (80%) Strand = Plus / Plus Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| |||||||| || || |||||||||||||| ||||||||||| || ||| Sbjct: 13874 gatgtacatgttcacaatgcactgggtaaaattatcattgagagcaacaacaacccagag 13933 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 ||||| || || ||||| |||| |||||| || || || ||||| || || |||||||| Sbjct: 13934 cattttctcacaaccaatccatactatgattctcgagttgtgggcaagtattgtgaaaaa 13993 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 | ||||| || | || || || |||||| | || ||||| || ||||| ||||||||| Sbjct: 13994 cgtgatcccaccttggcagtcgtagcttaccggcgaggacaatgtgatgatgaacttatc 14053 Query: 467 aatgttaccaacaaaa 482 ||||| |||| ||||| Sbjct: 14054 aatgtcaccagcaaaa 14069 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 14 tttggctttgttccagatcttactcactatctgtacacaaacaatatgctccgatacatc 73 ||||| |||||||||||||| || |||||||| ||||||||||| ||||| || || || Sbjct: 13416 tttggatttgttccagatctaacacactatctatacacaaacaacatgcttcgctatatt 13475 Query: 74 gaaggctatgtacagaaggt 93 ||||| || || |||||||| Sbjct: 13476 gaaggttacgttcagaaggt 13495
>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence Length = 114956 Score = 79.8 bits (40), Expect = 8e-12 Identities = 157/196 (80%) Strand = Plus / Plus Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| || ||||| || || ||||| |||||||| || |||||||| || || Sbjct: 62360 gatgtacatgttcataatgcactgggtaaaatcatcattgatagtaacaacaacccagaa 62419 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 ||||| || ||||| ||||||| |||||| || || || ||||| ||||| ||||||||| Sbjct: 62420 cattttctcactacaaacccatactatgattctcgagttgtgggcaaatattgtgaaaag 62479 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 ||||||| || | || ||||| ||||| || |||||| || ||||| ||||||||| Sbjct: 62480 cgggatcccacgttggcagttgtggcttataggcgtggagtatgtgatgatgaacttatc 62539 Query: 467 aatgttaccaacaaaa 482 || || || ||||||| Sbjct: 62540 aacgtgacaaacaaaa 62555 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 20 tttgttccagatcttactcactatctgtacacaaacaatatgctccgatacatcgaaggc 79 |||||||||||||| || |||||||| ||||||| || ||||| || ||||| || || Sbjct: 61907 tttgttccagatctaacacactatctatacacaagtaacatgcttcgctacattgagggt 61966 Query: 80 tatgtacagaaggt 93 ||||| |||||||| Sbjct: 61967 tatgttcagaaggt 61980
>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3, complete sequence Length = 152399 Score = 79.8 bits (40), Expect = 8e-12 Identities = 157/196 (80%) Strand = Plus / Minus Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| || ||||| || || ||||| |||||||| || |||||||| || || Sbjct: 48017 gatgtacatgttcataatgcactgggtaaaatcatcattgatagtaacaacaacccagaa 47958 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 ||||| || ||||| ||||||| |||||| || || || ||||| ||||| ||||||||| Sbjct: 47957 cattttctcactacaaacccatactatgattctcgagttgtgggcaaatattgtgaaaag 47898 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 ||||||| || | || ||||| ||||| || |||||| || ||||| ||||||||| Sbjct: 47897 cgggatcccacgttggcagttgtggcttataggcgtggagtatgtgatgatgaacttatc 47838 Query: 467 aatgttaccaacaaaa 482 || || || ||||||| Sbjct: 47837 aacgtgacaaacaaaa 47822 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 20 tttgttccagatcttactcactatctgtacacaaacaatatgctccgatacatcgaaggc 79 |||||||||||||| || |||||||| ||||||| || ||||| || ||||| || || Sbjct: 48470 tttgttccagatctaacacactatctatacacaagtaacatgcttcgctacattgagggt 48411 Query: 80 tatgtacagaaggt 93 ||||| |||||||| Sbjct: 48410 tatgttcagaaggt 48397
>gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete sequence Length = 113550 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 14 tttggctttgttccagatcttactcactatctgtacacaaacaatatgctccgatacatc 73 ||||| |||||||||||||| || ||||| || ||||||||||| ||||| || ||||| Sbjct: 17737 tttgggtttgttccagatctgacacactacctatacacaaacaacatgcttcgctacatt 17796 Query: 74 gaaggctatgtacagaaggt 93 ||||| ||||| |||||||| Sbjct: 17797 gaaggttatgttcagaaggt 17816 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 90 aggtgaaccctggaaatgctccgttggtagtggggcagttacttgatgacgagtgcccgg 149 |||||||||| || |||||||| || || || |||||| | || |||||||||||||| | Sbjct: 17897 aggtgaacccagggaatgctcctttagttgttgggcagctgctagatgacgagtgccctg 17956 Query: 150 aagatttcattaagggtttgattttgtctgttcg 183 ||||||| || || ||||||||| | |||||||| Sbjct: 17957 aagattttatcaaaggtttgattctttctgttcg 17990 Score = 60.0 bits (30), Expect = 7e-06 Identities = 150/190 (78%) Strand = Plus / Plus Query: 287 gatgtgcatgtccacaatgctcttgggaaaattatcattgacagcaacaacaatcctgag 346 ||||| ||||| ||||| || || || |||||||||||||| ||||||||||| || || Sbjct: 18177 gatgtacatgttcacaacgccctgggtaaaattatcattgatagcaacaacaacccagaa 18236 Query: 347 catttccttactaccaacccattctatgactcccgtgtggtgggtaaatactgtgaaaag 406 |||| || || |||||||| | |||||| || || || ||||| || || ||||| || Sbjct: 18237 aattttctcacaaccaacccttactatgattctcgagttgtgggcaagtattgtgagaaa 18296 Query: 407 agggatcctactcttgctgttgttgcttacagacgtggacagtgcgatgaagaacttatc 466 | || || || | || ||||| |||||| | || ||||| || ||||||||||||||| Sbjct: 18297 cgcgacccaaccttggcagttgtagcttaccggcgaggacaatgtgatgaagaacttatc 18356 Query: 467 aatgttacca 476 ||||| |||| Sbjct: 18357 aatgtcacca 18366
>gb|AC012372.4| Homo sapiens BAC clone CTD-2568K21 from 7, complete sequence Length = 91573 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 268 agtgagcgagggtgcccaagatg 290 ||||||||||||||||||||||| Sbjct: 4013 agtgagcgagggtgcccaagatg 4035
>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence Length = 169225 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 agtgagcgagggtgcccaagatg 290 ||||||||||||||||||||||| Sbjct: 119468 agtgagcgagggtgcccaagatg 119446
>ref|XM_705744.1| Candida albicans SC5314 hypothetical protein (CaO19.3496), mRNA Length = 5016 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 ggtaaatactgtgaaaagagggatcc 414 |||||||||||||||||||| ||||| Sbjct: 2722 ggtaaatactgtgaaaagagagatcc 2747
>ref|XM_705730.1| Candida albicans SC5314 vesical coat protein (CaO19.10990), mRNA Length = 5016 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 ggtaaatactgtgaaaagagggatcc 414 |||||||||||||||||||| ||||| Sbjct: 2722 ggtaaatactgtgaaaagagagatcc 2747
>gb|AC137552.11| Medicago truncatula clone mth2-9k5, complete sequence Length = 122089 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 314 aaaattatcattgacagcaacaacaatcctgagcattt 351 ||||| ||||||||||| || ||||||| ||||||||| Sbjct: 91176 aaaatcatcattgacagaaataacaatcttgagcattt 91213
>ref|XM_415060.1| PREDICTED: Gallus gallus similar to Clathrin heavy chain 1 (CLH-17) (LOC416765), mRNA Length = 5681 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 ctatgtacagaaggtgaaccc 99 ||||||||||||||||||||| Sbjct: 2406 ctatgtacagaaggtgaaccc 2426
>ref|XM_500150.1| Yarrowia lipolytica CLIB122, YALI0A17127g predicted mRNA Length = 4716 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 303 atgctcttgggaaaattatcattgacagcaacaacaa 339 ||||||||| |||||| |||||||||||||||||| Sbjct: 2390 atgctcttgccaaaatttacattgacagcaacaacaa 2426
>dbj|AK096891.1| Homo sapiens cDNA FLJ39572 fis, clone SKMUS2002153, highly similar to Homo sapiens SPG protein (SPG) mRNA Length = 2225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gtctacgtttgctgacacaat 254 ||||||||||||||||||||| Sbjct: 208 gtctacgtttgctgacacaat 188
>gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gtctacgtttgctgacacaat 254 ||||||||||||||||||||| Sbjct: 79085 gtctacgtttgctgacacaat 79105
>dbj|AK000773.1| Homo sapiens cDNA FLJ20766 fis, clone COL07978 Length = 2766 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gtctacgtttgctgacacaat 254 ||||||||||||||||||||| Sbjct: 622 gtctacgtttgctgacacaat 602
>emb|AJ312093.1|LES312093 Lycopersicon esculentum spy gene (SPINDLY-related gene), exons 1-18 Length = 18005 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 cagcaacaacaatcctgagcatttc 352 |||||||||||||||||| |||||| Sbjct: 12037 cagcaacaacaatcctgaacatttc 12013
>emb|AL162551.4|CNS01RHW Human chromosome 14 DNA sequence BAC R-479H16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 182960 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 aacttatcaatgttaccaaca 479 ||||||||||||||||||||| Sbjct: 127829 aacttatcaatgttaccaaca 127809
>emb|AL121576.5|CNS01DRW Human chromosome 14 DNA sequence BAC R-476J6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 221004 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 aacttatcaatgttaccaaca 479 ||||||||||||||||||||| Sbjct: 87306 aacttatcaatgttaccaaca 87286
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 303 atgctcttgggaaaattatcattgacagcaacaacaa 339 ||||||||| |||||| |||||||||||||||||| Sbjct: 1761278 atgctcttgccaaaatttacattgacagcaacaacaa 1761242
>ref|XM_474684.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4239 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tcattgacagcaacaacaat 340 |||||||||||||||||||| Sbjct: 3572 tcattgacagcaacaacaat 3553
>gb|AC102417.11| Mus musculus chromosome 3, clone RP24-499J8, complete sequence Length = 161101 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 tcttgggaaaattatcattg 326 |||||||||||||||||||| Sbjct: 145980 tcttgggaaaattatcattg 145961
>gb|AC121148.8| Mus musculus chromosome 3, clone RP24-369K4, complete sequence Length = 209365 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 tcttgggaaaattatcattg 326 |||||||||||||||||||| Sbjct: 100250 tcttgggaaaattatcattg 100231
>emb|CR382377.10| Zebrafish DNA sequence from clone DKEY-238I13 in linkage group 17, complete sequence Length = 105441 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tttgttccagatcttactca 39 |||||||||||||||||||| Sbjct: 75252 tttgttccagatcttactca 75233
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gtgcccaagatgtgcatgtc 298 |||||||||||||||||||| Sbjct: 200290 gtgcccaagatgtgcatgtc 200271
>ref|XM_850325.1| PREDICTED: Canis familiaris similar to desmoglein 4 (LOC612592), mRNA Length = 3198 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tgggaaaattatcattgaca 329 |||||||||||||||||||| Sbjct: 871 tgggaaaattatcattgaca 852
>emb|AL590367.4| Human DNA sequence from clone RP13-250M14 on chromosome X, complete sequence Length = 73357 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cctactcttgctgttgttgc 432 |||||||||||||||||||| Sbjct: 71807 cctactcttgctgttgttgc 71788
>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete sequence Length = 113420 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cttgggaaaattatcattga 327 |||||||||||||||||||| Sbjct: 23935 cttgggaaaattatcattga 23954
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tcattgacagcaacaacaat 340 |||||||||||||||||||| Sbjct: 5591549 tcattgacagcaacaacaat 5591530
>gb|AC122431.4| Mus musculus BAC clone RP24-176L8 from 6, complete sequence Length = 156005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gtgcccaagatgtgcatgtc 298 |||||||||||||||||||| Sbjct: 111366 gtgcccaagatgtgcatgtc 111385
>dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-217L21, complete sequence Length = 193828 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 tgtctgttcgatctcttcttcctg 197 |||||||| ||||||||||||||| Sbjct: 29356 tgtctgttggatctcttcttcctg 29379
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tcattgacagcaacaacaat 340 |||||||||||||||||||| Sbjct: 48756 tcattgacagcaacaacaat 48737
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tcattgacagcaacaacaat 340 |||||||||||||||||||| Sbjct: 146179 tcattgacagcaacaacaat 146160 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,432,939 Number of Sequences: 3902068 Number of extensions: 4432939 Number of successful extensions: 87677 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87384 Number of HSP's gapped (non-prelim): 283 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)