ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl30a06 |
|---|---|
| Clone Library Name | barley_pub |
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 132 bits (331), Expect = 6e-31 Identities = 64/102 (62%), Positives = 70/102 (68%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 L+AVLKE VDLENIP+EEV +NLRC+REGLTA AQ+RL IFG N Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKESKFLKFLG 67 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGKPPDWQDFVGIITLL+I Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLII 109
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 131 bits (329), Expect = 1e-30 Identities = 63/102 (61%), Positives = 70/102 (68%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 L+AVLKE VDLENIP+EEV +NLRC++EGLTA AQ+RL IFG N Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKESKFSKFLG 67 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGKPPDWQDFVGIITLL+I Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLII 109
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 130 bits (327), Expect = 2e-30 Identities = 63/102 (61%), Positives = 70/102 (68%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 L+AVLKE VDLENIP+EEV +NLRC++EGLTA AQ+RL IFG N Sbjct: 9 LDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSKLLKFLG 68 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGKPPDWQDFVGIITLL+I Sbjct: 69 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLII 110
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 130 bits (327), Expect = 2e-30 Identities = 63/102 (61%), Positives = 69/102 (67%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 LEAVLKE VDLEN+P+EEV ++LRCSREGLT E A +RL +FG N Sbjct: 8 LEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESKFLKFLG 67 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGKPPDWQDFVGIITLLVI Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVI 109
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump| 4) Length = 960 Score = 130 bits (326), Expect = 2e-30 Identities = 62/102 (60%), Positives = 69/102 (67%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 LEAVLKE VDLEN+P+EEV +NLRCS+EGLT + A +RL +FG N Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGKPPDWQDFVGIITLLVI Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVI 113
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump| 3) Length = 948 Score = 120 bits (301), Expect = 2e-27 Identities = 57/105 (54%), Positives = 65/105 (61%) Frame = +1 Query: 166 AGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXX 345 A LE ++ E VDLE IP+EEV L+CSREGL+ + + RLQIFGPN Sbjct: 1 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 60 Query: 346 XXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGKPPDWQDFVGI+ LLVI Sbjct: 61 FLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVI 105
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 120 bits (301), Expect = 2e-27 Identities = 56/104 (53%), Positives = 67/104 (64%) Frame = +1 Query: 169 GNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXX 348 G LE + E VDLENIP+EEV + L+C+R+GLT+++ QR++IFG N Sbjct: 2 GGLEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKF 61 Query: 349 XXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGKPPDWQDFVGII LLVI Sbjct: 62 LGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVI 105
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 118 bits (296), Expect = 7e-27 Identities = 56/106 (52%), Positives = 67/106 (63%) Frame = +1 Query: 163 EAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXX 342 +A +LE + E VDLE IP+EEV + L+C+REGL+A++ RLQIFGPN Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62 Query: 343 XXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NG GKPPDWQDF+GII LLVI Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVI 108
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump| 2) Length = 947 Score = 117 bits (293), Expect = 2e-26 Identities = 55/103 (53%), Positives = 64/103 (62%) Frame = +1 Query: 172 NLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXX 351 +LE + E VDLE IP+EEV L+CSREGLT ++ + R+QIFGPN Sbjct: 2 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 61 Query: 352 XXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NG G+PPDWQDFVGII LLVI Sbjct: 62 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVI 104
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump| 9) Length = 954 Score = 115 bits (289), Expect = 5e-26 Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 4/109 (3%) Frame = +1 Query: 166 AGNLEA----VLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXX 333 AGN ++ + E +DLE IP+EEVL LRC+REGLT+++ Q RL+IFGPN Sbjct: 2 AGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKEN 61 Query: 334 XXXXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGG+PPDWQDFVGI LL+I Sbjct: 62 KVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLII 110
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump| 6) Length = 949 Score = 111 bits (277), Expect = 1e-24 Identities = 52/101 (51%), Positives = 63/101 (62%) Frame = +1 Query: 178 EAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXX 357 + + KE VDLE IP++EV L+CSREGL++E+ + RLQIFG N Sbjct: 8 DEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGF 67 Query: 358 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGG+PPDWQDFVGI LL+I Sbjct: 68 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLII 108
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump| 1) Length = 948 Score = 111 bits (277), Expect = 1e-24 Identities = 52/102 (50%), Positives = 61/102 (59%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 LE + E VDLE IP+EEV L+C+REGLT ++ + R+ IFGPN Sbjct: 3 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 62 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NG +PPDWQDFVGII LLVI Sbjct: 63 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVI 104
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump| 5) Length = 948 Score = 110 bits (276), Expect = 2e-24 Identities = 50/102 (49%), Positives = 63/102 (61%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 L+ + E VDL IP+EEV + L+C+++GLTA +A RL +FGPN Sbjct: 3 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 62 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGG+PPDWQDFVGI+ LL+I Sbjct: 63 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLI 104
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump| 8) Length = 948 Score = 108 bits (270), Expect = 8e-24 Identities = 49/101 (48%), Positives = 64/101 (63%) Frame = +1 Query: 178 EAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXX 357 + + KE VDLE IP+EEV + L+CS+EGL++++ +RL+IFG N Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67 Query: 358 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME NGGGK PDWQDF+GI+ LL+I Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLII 108
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump| 7) Length = 961 Score = 103 bits (258), Expect = 2e-22 Identities = 47/102 (46%), Positives = 64/102 (62%) Frame = +1 Query: 175 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 354 L+A+ E +DLEN+P+EEV +L+C++EGLT+ + Q+RL +FG N Sbjct: 7 LKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFLG 66 Query: 355 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME +GGGKP D+ DFVGI+ LL+I Sbjct: 67 FMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLI 108
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 84.7 bits (208), Expect = 1e-16 Identities = 43/108 (39%), Positives = 58/108 (53%) Frame = +1 Query: 157 DKEAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXX 336 DK + + ++ +DL +PLEEV + LR S +GL + A++RL+IFGPN Sbjct: 6 DKPLLDPDTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENR 65 Query: 337 XXXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPLSWVME N PDW+DF GI+ LL+I Sbjct: 66 FVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLI 113
>PMAX_ARATH (Q9T0E0) Putative ATPase, plasma membrane-like| Length = 813 Score = 71.2 bits (173), Expect = 1e-12 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Frame = +1 Query: 202 DLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPN-XXXXXXXXXXXXXXXXMWNPLSW 378 DLE IP+EEV LRCSREGL+ + ++RL+IFGPN M+ PLSW Sbjct: 17 DLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSW 76 Query: 379 VMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 V++ NG G+ Q F+GI+ LL++ Sbjct: 77 VIQAAAIMAMLFANGDGR----QLFLGIVCLLIV 106
>PMA1_DICDI (P54679) Probable plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (PAT2) Length = 1058 Score = 57.0 bits (136), Expect = 3e-08 Identities = 30/88 (34%), Positives = 41/88 (46%) Frame = +1 Query: 217 PLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSWVMEXXX 396 PL+ +L+ L+ + GLT +AQ+RL+ GPN MWNPLSW ME Sbjct: 169 PLDNILEELKANANGLTKAEAQKRLEEVGPNAIPDVKRYPILEFLYFMWNPLSWTMEVAA 228 Query: 397 XXXXXXXNGGGKPPDWQDFVGIITLLVI 480 DW DF+ I LL++ Sbjct: 229 IVSIALL-------DWVDFILICALLLL 249
>PMA1_DUNAC (P54210) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 1103 Score = 54.3 bits (129), Expect = 2e-07 Identities = 35/107 (32%), Positives = 46/107 (42%) Frame = +1 Query: 160 KEAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXX 339 K A N + + EV D I LE+ L CS GL+ +A+ RL+ GPN Sbjct: 23 KSADNGDKGVDEV-DFAKIGLEDAFKYLNCSEHGLSGAEAEARLKQHGPNKLPDNSRNPV 81 Query: 340 XXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 MWNPL+W ME +G DF I+ LL+I Sbjct: 82 LVYFGYMWNPLAWAMEAAAIIAIALVDGA-------DFALIVGLLII 121
>PMA1_DUNBI (P54211) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 1131 Score = 52.8 bits (125), Expect = 5e-07 Identities = 31/94 (32%), Positives = 41/94 (43%) Frame = +1 Query: 199 VDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSW 378 VD I L++ L C++ GL++ +A RLQ GPN MWNPL+W Sbjct: 32 VDFAKITLDDAFKYLNCNKHGLSSAEAAARLQQHGPNKLPDSSRNPVLVFLGYMWNPLAW 91 Query: 379 VMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVI 480 ME D DFV I+ LL+I Sbjct: 92 AMEAAAIISIALL-------DVADFVLIVGLLLI 118
>Y1226_METJA (Q58623) Putative cation-transporting ATPase MJ1226 (EC 3.6.3.-)| Length = 805 Score = 42.7 bits (99), Expect = 5e-04 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 220 LEEVLDNLRCS-REGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSWVMEXXX 396 +EE+ + + S + GL+ E+A++RL+I+G N WNP++W++E Sbjct: 8 VEEIEEEYKTSIKTGLSTEEAKKRLKIYGYNEIPEKKVHPIIKFLSYFWNPIAWMIEIAA 67 Query: 397 XXXXXXXNGGGKPPDWQDFVGIITLLVI 480 + W DFV I+ LL++ Sbjct: 68 ILSAIIKH-------WVDFVIILILLLV 88
>AT1A_ARTSF (P17326) Sodium/potassium-transporting ATPase alpha chain (EC| 3.6.3.9) (Sodium pump) (Na+/K+ ATPase) Length = 996 Score = 34.7 bits (78), Expect = 0.14 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Frame = +1 Query: 160 KEAGNLEAVLKEV-VDLENIPLEEVLDNLRCSRE-GLTAEQAQQRLQIFGPN 309 K+ L + KE+ +D IPLEE+ L + E GLT+ QA+ L+ +GPN Sbjct: 4 KQGKQLSDLKKELELDQHKIPLEELCRRLGTNTETGLTSSQAKSHLEKYGPN 55
>ATCL_SYNP7 (P37278) Cation-transporting ATPase pacL (EC 3.6.3.-)| Length = 926 Score = 34.3 bits (77), Expect = 0.18 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +1 Query: 166 AGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPN 309 + +L V + + ++ +EE L R GLTAE A RL ++GPN Sbjct: 7 SASLTDVRQPIAHWHSLTVEECHQQLDAHRNGLTAEVAADRLALYGPN 54
>ATMB_SALTY (P22036) Magnesium-transporting ATPase, P-type 1 (EC 3.6.3.2)| (Mg(2+) transport ATPase, P-type 1) Length = 908 Score = 33.1 bits (74), Expect = 0.40 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +1 Query: 223 EEVLDNLRCSREGLTAEQAQQRLQIFGPN 309 EE L L R+GLT E+A +RL+++G N Sbjct: 37 EETLARLNSHRQGLTIEEASERLKVYGRN 65
>Y250_ARCFU (O29989) Hypothetical protein AF0250| Length = 110 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +1 Query: 163 EAGNLEAVLKEVVDLENIPLEEVLDNLR 246 E GNLE V + +EN+P+EEV+ LR Sbjct: 82 EKGNLEEVFELAEKIENMPIEEVVKMLR 109
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 29.6 bits (65), Expect = 4.4 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +1 Query: 13 PSAEAKKIQPEPEGLLTSGRPARGTAHPPGRGR 111 P A + P P G+ GRPAR A PG GR Sbjct: 209 PGASPGNMPPRPGGVGGPGRPARPGAPRPGGGR 241
>THIE_CHLCV (Q824E9) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 212 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = +1 Query: 196 VVDLENIPLEEVLDNL-RCSREGLTAEQAQQR 288 + D +NIP+EE LD + C + G+TA Q +++ Sbjct: 11 ITDRQNIPMEEYLDFVSACVQSGVTAVQLREK 42
>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) (mTCF-3) Length = 584 Score = 28.5 bits (62), Expect = 9.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 110 LPLPGGWAVPLAGRPLVSKPSG 45 +P P GW VP G+P+ S P G Sbjct: 241 IPHPLGWLVPQQGQPMYSLPPG 262
>TF7L1_HUMAN (Q9HCS4) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) Length = 588 Score = 28.5 bits (62), Expect = 9.9 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 110 LPLPGGWAVPLAGRPLVSKPSG 45 +P P GW VP G+P+ S P G Sbjct: 244 IPHPLGWLVPQQGQPMYSLPPG 265 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.136 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,446,626 Number of Sequences: 219361 Number of extensions: 539593 Number of successful extensions: 1527 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 1457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1519 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
