>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD|
           delta)
          Length = 868

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = +3

Query: 252 VLLHGDLDLWVLEARLLPNMDMFSEHIRRCFASCGTAS 365
           +LLHGDLDL +++AR LPNMDMFSEH+RR F +C   +
Sbjct: 10  MLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACA 47

>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta|
           1) (PLDbeta)
          Length = 967

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +3

Query: 246 KPVLLHGDLDLWVLEARLLPNMDMFSEHIRRCF 344
           K +L HG+LD+W+  A+ LPNMDMF + +   F
Sbjct: 150 KVLLSHGNLDIWIYHAKNLPNMDMFHKTLGDMF 182

>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD|
           gamma 3)
          Length = 866

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +3

Query: 225 DESPSPPKPVLLHGDLDLWVLEARLLPNMDMF 320
           D S    +  LLHG+LD+WV EA+ LPNMD F
Sbjct: 33  DTSSGSLRVELLHGNLDIWVKEAKHLPNMDGF 64

>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD|
           gamma 1) (Choline phosphatase) (Lipophosphodiesterase
           II) (Lecithinase D)
          Length = 858

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +3

Query: 255 LLHGDLDLWVLEARLLPNMDMFSEHIRRCFASCG 356
           LLHG+LD+WV EA+ LPNMD F   +    +  G
Sbjct: 39  LLHGNLDIWVKEAKHLPNMDGFHNRLGGMLSGLG 72

>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta|
           2) (PLDdelta1)
          Length = 915

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +3

Query: 246 KPVLLHGDLDLWVLEARLLPNMDMF 320
           K +LLHG+LD+WV  A  LPN+D+F
Sbjct: 111 KVLLLHGNLDIWVSCANNLPNLDLF 135

>ISPH_THET8 (Q5SMC8) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 340

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 317 HVHVGQQPRLEDPE-VEVPVQE 255
           H HVG+ PRL DP  VEVP  E
Sbjct: 161 HTHVGKDPRLADPRTVEVPDPE 182

>ISPH_THET2 (Q72G65) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 340

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 317 HVHVGQQPRLEDPE-VEVPVQE 255
           H HVG+ PRL DP  VEVP  E
Sbjct: 161 HTHVGKDPRLADPRTVEVPDPE 182

>RLA2_SCHPO (P08094) 60S acidic ribosomal protein P2-alpha (A2) (L40C) (L12EI)|
          Length = 110

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 415 ASPTPRLEGGGCLGAQEEAVPQEAKQRRMCSENM 314
           AS  P    GG   A EEA  +EAK+     E+M
Sbjct: 71  ASAAPAAAAGGAAPAAEEAAKEEAKEEEESDEDM 104

>VMAT_RABVP (P08671) Matrix protein (M2 phosphoprotein)|
          Length = 202

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +3

Query: 225 DESPSPPKPVLLH-GDLDLWVLEARLLPNMDMFSEHIRRCFASCGTASSCAP 377
           DE    P PV     D DLW+     +P  ++ S+  RR F   G    C+P
Sbjct: 13  DEDTQKPSPVSAPLDDDDLWLPPPEYVPLKELTSKKNRRNFCINGGVKVCSP 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,879,177
Number of Sequences: 219361
Number of extensions: 310274
Number of successful extensions: 1252
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)