>SPY_HORVU (O82422) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-)
           (HvSPY)
          Length = 944

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +3

Query: 270 MESLQGKESNGAVPVCNGGGGA 335
           MESLQGKESNGAVPVCNGGGGA
Sbjct: 1   MESLQGKESNGAVPVCNGGGGA 22

>SPY_ORYSA (Q6YZI0) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-)
          Length = 927

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +3

Query: 264 PGMESLQGKESNGAVPVCNGG 326
           PGM+S +G+ESNG VP  NGG
Sbjct: 4   PGMDSSEGRESNGVVPERNGG 24

>FXL19_MOUSE (Q6PB97) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 331 PPPPLQTGTAPLLSFPWRDSIPGCTNERERE 239
           PPPPL     PL + P  D +PG    +ERE
Sbjct: 168 PPPPLPRRKGPLPAGPTPDDVPGPPKRKERE 198

>YICF_ECOLI (P25772) Hypothetical DNA ligase-like protein yicF|
          Length = 560

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 295 LSFPWRDSIPGCTNERERERVSFSLPSYWRAAPGTGAGR 179
           +  P   +    ++ER   ++ FS   +W+  PGTG+GR
Sbjct: 492 MGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGR 530

>ADA2B_MACPR (O19025) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 387

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -2

Query: 334 APPPPLQTGTAPLLSFPWRDSIPGCTNERE--RERVSFSLPSYWRAAPGTGAGRRE 173
           A PP L   T+PL      +     T ERE   + VS + P  W A P +G GR+E
Sbjct: 220 ARPPAL---TSPLAVTGEANGHSKPTGERETPEDLVSPASPPSWPAIPNSGQGRKE 272

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = -3

Query: 306 RRRCSPSLGGTPSLDARMKE-----RERGSPSP 223
           RRR SPS   +PS   R KE     R R SPSP
Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRGRRRRSPSP 552

>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 331 PPPPLQTGTAPLLSFPWRDSIPGCTN 254
           PPP L +G+ P    P + S+PG T+
Sbjct: 441 PPPTLSSGSPPQPRHPIQPSLPGTTS 466

>Y2401_ARCFU (O30270) Hypothetical protein AF2401|
          Length = 348

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 301 PLLSFPWRDSIPGCTNERERERV 233
           P LSFPW   I    N R RE+V
Sbjct: 309 PALSFPWERRIIESRNRRRREKV 331

>VGNM_CPMV (P03599) Genome polyprotein M (RNA2 polyprotein) [Contains: Movement|
            protein (MP); Large coat protein (LCP) (Coat protein
            VP37); Small coat protein, N-terminus part (SCP) (Coat
            protein VP23); Small coat protein, C-terminus part]
          Length = 1046

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2

Query: 331  PPPPLQTGTAPLLSFPWRD 275
            PP PL T T PLL F +RD
Sbjct: 1011 PPFPLSTETPPLLKFRFRD 1029


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,459,001
Number of Sequences: 219361
Number of extensions: 502395
Number of successful extensions: 1791
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)