ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 2e-45
2ref|NM_187916.1| Oryza sativa (japonica cultivar-group), Ozsa835... 125 1e-25
3dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 123 4e-25
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 4e-25
5dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
6gb|BC065817.1| Homo sapiens cDNA clone IMAGE:6186273, partial cds 48 0.019
7gb|AF193059.1|AF193059 Homo sapiens SP1224 mRNA, complete cds 48 0.019
8gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete... 48 0.019
9ref|XM_483497.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
10ref|XM_483496.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
11ref|XM_450281.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
12ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predic... 44 0.29
13dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
15dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
16dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
17dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
18dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
19dbj|AK105272.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
20dbj|AK071880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
21ref|XM_470408.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.2
22gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
23gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
25ref|XM_541741.2| PREDICTED: Canis familiaris similar to H1 histo... 42 1.2
26emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 42 1.2
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
29gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 42 1.2
30gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 42 1.2
31dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
32gb|AF500307.1| Guinea pig cytomegalovirus MIP-1-like protein gen... 42 1.2
33dbj|AK063498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
34gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.2
35ref|NM_188233.1| Oryza sativa (japonica cultivar-group), predic... 40 4.6
36ref|XM_468012.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.6
37gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
38gb|U51564.1|HCU51564 Human herpesvirus 5 UL105 (UL105) gene, com... 40 4.6
39gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome 40 4.6
40gb|AY486477.1|AY486470S08 Human herpesvirus 5 strain Toledo geno... 40 4.6
41ref|XM_983172.1| PREDICTED: Mus musculus hypothetical protein LO... 40 4.6
42ref|XM_980705.1| PREDICTED: Mus musculus hypothetical protein LO... 40 4.6
43gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosom... 40 4.6
44ref|XM_541817.2| PREDICTED: Canis familiaris similar to ataxin 7... 40 4.6
45ref|XM_843193.1| PREDICTED: Canis familiaris similar to ataxin 7... 40 4.6
46gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete s... 40 4.6
47gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete seq... 40 4.6
48gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequ... 40 4.6
49gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete ... 40 4.6
50gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequ... 40 4.6
51gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete s... 40 4.6
52gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome 40 4.6
53ref|XM_862875.1| PREDICTED: Canis familiaris similar to Midasin ... 40 4.6
54ref|XM_532232.2| PREDICTED: Canis familiaris similar to Midasin ... 40 4.6
55gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome... 40 4.6
56gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 4.6
57gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.6
58gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome 40 4.6
59emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complet... 40 4.6
60gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, ... 40 4.6
61gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 40 4.6
62dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
63dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
64dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
65gb|AC006464.3| Homo sapiens BAC clone RP11-436C12 from 2, comple... 40 4.6
66dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
67dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
68dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
69dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
70dbj|AK066823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
71dbj|AK064009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
72gb|AF047524.1|AF047524 Human cytomegalovirus UL104 gene, complet... 40 4.6
73gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6 
>dbj|AK100311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K23, full
           insert sequence
          Length = 3500

 Score =  190 bits (96), Expect = 2e-45
 Identities = 156/176 (88%)
 Strand = Plus / Plus

                                                                       
Query: 171 gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 230
           |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 171 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 230

                                                                       
Query: 231 aaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtgcac 290
           |||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | |||||
Sbjct: 231 aaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatgcac 290

                                                                   
Query: 291 acagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgca 346
            ||||||||||||||||| |||||||| |||||||||||| | |||||||||||||
Sbjct: 291 gcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgca 346
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>ref|NM_187916.1| Oryza sativa (japonica cultivar-group), Ozsa8358 predicted mRNA
          Length = 3594

 Score =  125 bits (63), Expect = 1e-25
 Identities = 105/119 (88%)
 Strand = Plus / Plus

                                                                        
Query: 228  cggaaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtg 287
            ||||||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | ||
Sbjct: 1042 cggaaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatg 1101

                                                                       
Query: 288  cacacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgca 346
            ||| ||||||||||||||||| |||||||| |||||||||||| | |||||||||||||
Sbjct: 1102 cacgcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgca 1160



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 171 gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcg 229
           |||||| || ||||| |||| |||||||||||| || ||||||||||||||||||||||
Sbjct: 936 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcg 994
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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score =  123 bits (62), Expect = 4e-25
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                          
Query: 229    ggaaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtgc 288
              |||||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | |||
Sbjct: 142725 ggaaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatgc 142666

                                                                        
Query: 289    acacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgca 346
              || ||||||||||||||||| |||||||| |||||||||||| | |||||||||||||
Sbjct: 142665 acgcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgca 142608



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 171    gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 230
              |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 143613 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 143554
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 4e-25
 Identities = 104/118 (88%)
 Strand = Plus / Minus

                                                                           
Query: 229     ggaaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtgc 288
               |||||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | |||
Sbjct: 8567572 ggaaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatgc 8567513

                                                                         
Query: 289     acacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgca 346
               || ||||||||||||||||| |||||||| |||||||||||| | |||||||||||||
Sbjct: 8567512 acgcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgca 8567455



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                           
Query: 171     gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 230
               |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 8568460 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 8568401



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 120      ggcgccgcggcggtggcggccgccgg 145
                ||||||||||||| ||||||||||||
Sbjct: 26385629 ggcgccgcggcggcggcggccgccgg 26385604



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 121      gcgccgcggcggtggcggccg 141
                |||||||||||||||||||||
Sbjct: 10233639 gcgccgcggcggtggcggccg 10233619



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     ggcgccgcggcggtggcggc 139
               ||||||||||||||||||||
Sbjct: 5127634 ggcgccgcggcggtggcggc 5127615
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>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0462H08
          Length = 139152

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 171 gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 230
           |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 655 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 596
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>gb|BC065817.1| Homo sapiens cDNA clone IMAGE:6186273, partial cds
          Length = 1900

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 117 ggaggcgccgcggcggtggcggcc 140
           ||||||||||||||||||||||||
Sbjct: 137 ggaggcgccgcggcggtggcggcc 114
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>gb|AF193059.1|AF193059 Homo sapiens SP1224 mRNA, complete cds
          Length = 2492

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 117 ggaggcgccgcggcggtggcggcc 140
           ||||||||||||||||||||||||
Sbjct: 159 ggaggcgccgcggcggtggcggcc 136
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>gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete sequence
          Length = 176539

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 117    ggaggcgccgcggcggtggcggcc 140
              ||||||||||||||||||||||||
Sbjct: 171441 ggaggcgccgcggcggtggcggcc 171418
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>ref|XM_483497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1719

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 121 gcgccgcggcggtggcggccgccggt 146
           |||||||||||| |||||||||||||
Sbjct: 96  gcgccgcggcggcggcggccgccggt 71
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>ref|XM_483496.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2194

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 121 gcgccgcggcggtggcggccgccggt 146
           |||||||||||| |||||||||||||
Sbjct: 101 gcgccgcggcggcggcggccgccggt 76
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>ref|XM_450281.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 813

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 ggcggaggcgccgcggcggtggcggc 139
           ||||| ||||||||||||||||||||
Sbjct: 390 ggcggcggcgccgcggcggtggcggc 415
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>ref|NM_192395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 120 ggcgccgcggcggtggcggccgccgg 145
           ||||||||||||| ||||||||||||
Sbjct: 159 ggcgccgcggcggcggcggccgccgg 134
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 114     ggcggaggcgccgcggcggtggcggc 139
               ||||| ||||||||||||||||||||
Sbjct: 3772675 ggcggcggcgccgcggcggtggcggc 3772700
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 121      gcgccgcggcggtggcggccgccggt 146
                |||||||||||| |||||||||||||
Sbjct: 26536078 gcgccgcggcggcggcggccgccggt 26536053
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>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 120   ggcgccgcggcggtggcggccgccgg 145
             ||||||||||||| ||||||||||||
Sbjct: 59494 ggcgccgcggcggcggcggccgccgg 59469
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>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1080A02
          Length = 151360

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 114   ggcggaggcgccgcggcggtggcggc 139
             ||||| ||||||||||||||||||||
Sbjct: 12191 ggcggcggcgccgcggcggtggcggc 12216
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>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1116_H10
          Length = 101054

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 114   ggcggaggcgccgcggcggtggcggc 139
             ||||| ||||||||||||||||||||
Sbjct: 79977 ggcggcggcgccgcggcggtggcggc 80002
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>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702E04
          Length = 190948

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 121   gcgccgcggcggtggcggccgccggt 146
             |||||||||||| |||||||||||||
Sbjct: 84945 gcgccgcggcggcggcggccgccggt 84920
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>dbj|AK105272.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H01, full
           insert sequence
          Length = 1718

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 121 gcgccgcggcggtggcggccgccggt 146
           |||||||||||| |||||||||||||
Sbjct: 96  gcgccgcggcggcggcggccgccggt 71
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>dbj|AK071880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043I23, full
           insert sequence
          Length = 2193

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 121 gcgccgcggcggtggcggccgccggt 146
           |||||||||||| |||||||||||||
Sbjct: 100 gcgccgcggcggcggcggccgccggt 75
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>ref|XM_470408.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1845

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 cgccgcggcggtggcggccgc 142
           |||||||||||||||||||||
Sbjct: 33  cgccgcggcggtggcggccgc 53
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>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
             complete sequence
          Length = 145323

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   cgccgcggcggtggcggccgc 142
             |||||||||||||||||||||
Sbjct: 71257 cgccgcggcggtggcggccgc 71277
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>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0088F07, complete sequence
          Length = 139180

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   gcgccgcggcggtggcggccg 141
             |||||||||||||||||||||
Sbjct: 16086 gcgccgcggcggtggcggccg 16066
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 122      cgccgcggcggtggcggccgc 142
                |||||||||||||||||||||
Sbjct: 35363063 cgccgcggcggtggcggccgc 35363043
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>ref|XM_541741.2| PREDICTED: Canis familiaris similar to H1 histone family, member X
           (LOC484627), mRNA
          Length = 764

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 120 ggcgccgcggcggtggcggccgccg 144
           ||||||| |||||||||||||||||
Sbjct: 538 ggcgccggggcggtggcggccgccg 514
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 125     cgcggcggtggcggccgccgg 145
               |||||||||||||||||||||
Sbjct: 2005624 cgcggcggtggcggccgccgg 2005604
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 122      cgccgcggcggtggcggccgc 142
                |||||||||||||||||||||
Sbjct: 22227992 cgccgcggcggtggcggccgc 22228012



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 121      gcgccgcggcggtggcggccg 141
                |||||||||||||||||||||
Sbjct: 21135303 gcgccgcggcggtggcggccg 21135283
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 122      cgccgcggcggtggcggccgc 142
                |||||||||||||||||||||
Sbjct: 35453135 cgccgcggcggtggcggccgc 35453115
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>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence,
            complete sequence
          Length = 116443

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 122  cgccgcggcggtggcggccgc 142
            |||||||||||||||||||||
Sbjct: 5391 cgccgcggcggtggcggccgc 5411
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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
              sequence
          Length = 133846

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    cgccgcggcggtggcggccgc 142
              |||||||||||||||||||||
Sbjct: 124563 cgccgcggcggtggcggccgc 124583
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>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498A12
          Length = 159749

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   gcgccgcggcggtggcggccg 141
             |||||||||||||||||||||
Sbjct: 98953 gcgccgcggcggtggcggccg 98933
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>gb|AF500307.1| Guinea pig cytomegalovirus MIP-1-like protein gene, complete cds
          Length = 1803

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 124  ccgcggcggtggcggccgccg 144
            |||||||||||||||||||||
Sbjct: 1400 ccgcggcggtggcggccgccg 1380
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>dbj|AK063498.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D07, full
           insert sequence
          Length = 903

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 cgccgcggcggtggcggccgc 142
           |||||||||||||||||||||
Sbjct: 522 cgccgcggcggtggcggccgc 542
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 124     ccgcggcggtggcggccgccg 144
               |||||||||||||||||||||
Sbjct: 4688859 ccgcggcggtggcggccgccg 4688839



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 121     gcgccgcggcggtggcggccg 141
               |||||||||||||||||||||
Sbjct: 2818156 gcgccgcggcggtggcggccg 2818136
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>ref|NM_188233.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 ggcgccgcggcggtggcggc 139
           ||||||||||||||||||||
Sbjct: 277 ggcgccgcggcggtggcggc 296
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>ref|XM_468012.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 cgagaaggcggaggcgccgc 127
           ||||||||||||||||||||
Sbjct: 385 cgagaaggcggaggcgccgc 404
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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 126  gcggcggtggcggccgccgg 145
            ||||||||||||||||||||
Sbjct: 9957 gcggcggtggcggccgccgg 9938
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>gb|U51564.1|HCU51564 Human herpesvirus 5 UL105 (UL105) gene, complete cds
          Length = 3362

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 ggatcgtcgacaaggtcaag 189
           ||||||||||||||||||||
Sbjct: 398 ggatcgtcgacaaggtcaag 417
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>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome
          Length = 235645

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 153327 ggatcgtcgacaaggtcaag 153346
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>gb|AY486477.1|AY486470S08 Human herpesvirus 5 strain Toledo genome, partial sequence
          Length = 24216

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   ggatcgtcgacaaggtcaag 189
             ||||||||||||||||||||
Sbjct: 21993 ggatcgtcgacaaggtcaag 22012
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>ref|XM_983172.1| PREDICTED: Mus musculus hypothetical protein LOC670767 (LOC670767),
           mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gccgcggcggtggcggccgc 142
           ||||||||||||||||||||
Sbjct: 183 gccgcggcggtggcggccgc 164
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>ref|XM_980705.1| PREDICTED: Mus musculus hypothetical protein LOC665982 (LOC665982),
           mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 gccgcggcggtggcggccgc 142
           ||||||||||||||||||||
Sbjct: 183 gccgcggcggtggcggccgc 164
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>gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosome 16, complete sequence
          Length = 175319

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    gccgcggcggtggcggccgc 142
              ||||||||||||||||||||
Sbjct: 137125 gccgcggcggtggcggccgc 137106
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>ref|XM_541817.2| PREDICTED: Canis familiaris similar to ataxin 7, transcript variant
           1 (LOC484701), mRNA
          Length = 2787

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 116 cggaggcgccgcggcggtggcggc 139
           ||||||||||||||||| ||||||
Sbjct: 179 cggaggcgccgcggcggcggcggc 156
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>ref|XM_843193.1| PREDICTED: Canis familiaris similar to ataxin 7, transcript variant
           2 (LOC484701), mRNA
          Length = 2999

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 116 cggaggcgccgcggcggtggcggc 139
           ||||||||||||||||| ||||||
Sbjct: 179 cggaggcgccgcggcggcggcggc 156
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>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence
          Length = 233739

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ggatcgtcgacaaggtcaag 189
             ||||||||||||||||||||
Sbjct: 68629 ggatcgtcgacaaggtcaag 68610
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>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ggatcgtcgacaaggtcaag 189
             ||||||||||||||||||||
Sbjct: 74877 ggatcgtcgacaaggtcaag 74858
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>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence
          Length = 234881

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 189021 ggatcgtcgacaaggtcaag 189040
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>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence
          Length = 226889

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ggatcgtcgacaaggtcaag 189
             ||||||||||||||||||||
Sbjct: 70313 ggatcgtcgacaaggtcaag 70294
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>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence
          Length = 229700

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ggatcgtcgacaaggtcaag 189
             ||||||||||||||||||||
Sbjct: 74982 ggatcgtcgacaaggtcaag 74963
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>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 186479 ggatcgtcgacaaggtcaag 186498
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>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 151452 ggatcgtcgacaaggtcaag 151471
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>ref|XM_862875.1| PREDICTED: Canis familiaris similar to Midasin (MIDAS-containing
             protein), transcript variant 2 (LOC474995), mRNA
          Length = 16583

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   tgcacacagccaaggaggtt 305
             ||||||||||||||||||||
Sbjct: 12548 tgcacacagccaaggaggtt 12529
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>ref|XM_532232.2| PREDICTED: Canis familiaris similar to Midasin (MIDAS-containing
             protein), transcript variant 1 (LOC474995), mRNA
          Length = 16802

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   tgcacacagccaaggaggtt 305
             ||||||||||||||||||||
Sbjct: 12767 tgcacacagccaaggaggtt 12748
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>gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome 16, complete sequence
          Length = 202652

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    gccgcggcggtggcggccgc 142
              ||||||||||||||||||||
Sbjct: 172883 gccgcggcggtggcggccgc 172902
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 154357 ggatcgtcgacaaggtcaag 154376
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 122     cgccgcggcggtggcggccg 141
               ||||||||||||||||||||
Sbjct: 3598505 cgccgcggcggtggcggccg 3598524
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>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome
          Length = 221454

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 140629 ggatcgtcgacaaggtcaag 140648
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>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome
          Length = 229354

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 152020 ggatcgtcgacaaggtcaag 152039
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>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome
          Length = 215678

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 140637 ggatcgtcgacaaggtcaag 140656
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ggatcgtcgacaaggtcaag 189
              ||||||||||||||||||||
Sbjct: 162850 ggatcgtcgacaaggtcaag 162869
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     gcggcggtggcggccgccgg 145
               ||||||||||||||||||||
Sbjct: 3404337 gcggcggtggcggccgccgg 3404356
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 120      ggcgccgcggcggtggcggc 139
                ||||||||||||||||||||
Sbjct: 28999135 ggcgccgcggcggtggcggc 28999116
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 108      cgagaaggcggaggcgccgc 127
                ||||||||||||||||||||
Sbjct: 32555003 cgagaaggcggaggcgccgc 32554984
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>gb|AC006464.3| Homo sapiens BAC clone RP11-436C12 from 2, complete sequence
          Length = 99908

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   aaggaaatttggaaccaattatgt 286
             |||||||||||||| |||||||||
Sbjct: 39418 aaggaaatttggaagcaattatgt 39395
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>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0001B06
          Length = 140304

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    ggcgccgcggcggtggcggc 139
              ||||||||||||||||||||
Sbjct: 121072 ggcgccgcggcggtggcggc 121053
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>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498B01
          Length = 146812

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ggcgccgcggcggtggcggc 139
             ||||||||||||||||||||
Sbjct: 59665 ggcgccgcggcggtggcggc 59646
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>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H10
          Length = 166570

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ggcgccgcggcggtggcggc 139
             ||||||||||||||||||||
Sbjct: 14122 ggcgccgcggcggtggcggc 14103
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>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1353_F08
          Length = 101988

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   cgagaaggcggaggcgccgc 127
             ||||||||||||||||||||
Sbjct: 51976 cgagaaggcggaggcgccgc 51957
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>dbj|AK066823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075K03, full
           insert sequence
          Length = 1188

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 cgagaaggcggaggcgccgc 127
           ||||||||||||||||||||
Sbjct: 385 cgagaaggcggaggcgccgc 404
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>dbj|AK064009.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G10, full
           insert sequence
          Length = 2271

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 ggcgccgcggcggtggcggc 139
           ||||||||||||||||||||
Sbjct: 130 ggcgccgcggcggtggcggc 149
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>gb|AF047524.1|AF047524 Human cytomegalovirus UL104 gene, complete cds
          Length = 2094

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  ggatcgtcgacaaggtcaag 189
            ||||||||||||||||||||
Sbjct: 2016 ggatcgtcgacaaggtcaag 2035
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     gcggcggtggcggccgccgg 145
               ||||||||||||||||||||
Sbjct: 3413042 gcggcggtggcggccgccgg 3413061


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,078,238
Number of Sequences: 3902068
Number of extensions: 2078238
Number of successful extensions: 56700
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55642
Number of HSP's gapped (non-prelim): 1058
length of query: 346
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 324
effective length of database: 17,147,199,772
effective search space: 5555692726128
effective search space used: 5555692726128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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