Clone Name | bastl29h07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Plus Query: 156 gatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggca 215 |||||||||||| ||||| || | ||||| |||||| |||| || | ||||| ||||| Sbjct: 4820085 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 4820144 Query: 216 acgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtctg 275 || |||||||||||||| | ||| ||||| || || ||||||||||| ||| ||||||| Sbjct: 4820145 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 4820204 Query: 276 ctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaaccc 335 ||| |||||||||||||||||||||||||| || || || || ||||||||||||||| Sbjct: 4820205 cttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccc 4820264 Query: 336 caacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgagct 395 | |||||| |||| |||||||||||| | || |||||| ||||| || || ||||| Sbjct: 4820265 taggaactccgtctcccagatcaagcgcctcctcggccgcgccttcgccgacccggagct 4820324 Query: 396 gcagcgcga 404 ||||||||| Sbjct: 4820325 gcagcgcga 4820333
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full insert sequence Length = 3137 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Plus Query: 156 gatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggca 215 |||||||||||| ||||| || | ||||| |||||| |||| || | ||||| ||||| Sbjct: 183 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 242 Query: 216 acgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtctg 275 || |||||||||||||| | ||| ||||| || || ||||||||||| ||| ||||||| Sbjct: 243 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 302 Query: 276 ctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaaccc 335 ||| |||||||||||||||||||||||||| || || || || ||||||||||||||| Sbjct: 303 cttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccc 362 Query: 336 caacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgagct 395 | |||||| |||| |||||||||||| | || |||||| ||||| || || ||||| Sbjct: 363 taggaactccgtctcccagatcaagcgcctcctcggccgcgccttcgccgacccggagct 422 Query: 396 gcagcgcga 404 ||||||||| Sbjct: 423 gcagcgcga 431
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 145 bits (73), Expect = 2e-31 Identities = 205/249 (82%) Strand = Plus / Plus Query: 156 gatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggca 215 |||||||||||| ||||| || | ||||| |||||| |||| || | ||||| ||||| Sbjct: 92493 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 92552 Query: 216 acgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtctg 275 || |||||||||||||| | ||| ||||| || || ||||||||||| ||| ||||||| Sbjct: 92553 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 92612 Query: 276 ctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaaccc 335 ||| |||||||||||||||||||||||||| || || || || ||||||||||||||| Sbjct: 92613 cttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccc 92672 Query: 336 caacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgagct 395 | |||||| |||| |||||||||||| | || |||||| ||||| || || ||||| Sbjct: 92673 taggaactccgtctcccagatcaagcgcctcctcggccgcgccttcgccgacccggagct 92732 Query: 396 gcagcgcga 404 ||||||||| Sbjct: 92733 gcagcgcga 92741
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3139 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 154 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 213 |||||||||||||| || |||||| |||| || |||||||||||||||| || || ||| Sbjct: 212 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 271 Query: 214 caacgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtc 273 || || ||||| || ||||| | ||| ||||| || || |||||||| || || || ||| Sbjct: 272 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 331 Query: 274 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 333 ||||| |||||||||||||| |||||||| || || |||||||| |||||| |||||| Sbjct: 332 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 391 Query: 334 cccaacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgag 393 || || || || | || ||||||||||| | || || ||||||| | ||||||| ||| Sbjct: 392 ccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgag 451 Query: 394 ctgcagcg 401 || ||||| Sbjct: 452 ctccagcg 459
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 154 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 213 |||||||||||||| || |||||| |||| || |||||||||||||||| || || ||| Sbjct: 4253481 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 4253540 Query: 214 caacgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtc 273 || || ||||| || ||||| | ||| ||||| || || |||||||| || || || ||| Sbjct: 4253541 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 4253600 Query: 274 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 333 ||||| |||||||||||||| |||||||| || || |||||||| |||||| |||||| Sbjct: 4253601 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 4253660 Query: 334 cccaacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgag 393 || || || || | || ||||||||||| | || || ||||||| | ||||||| ||| Sbjct: 4253661 ccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgag 4253720 Query: 394 ctgcagcg 401 || ||||| Sbjct: 4253721 ctccagcg 4253728
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 154 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 213 |||||||||||||| || |||||| |||| || |||||||||||||||| || || ||| Sbjct: 91448 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 91507 Query: 214 caacgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtc 273 || || ||||| || ||||| | ||| ||||| || || |||||||| || || || ||| Sbjct: 91508 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 91567 Query: 274 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 333 ||||| |||||||||||||| |||||||| || || |||||||| |||||| |||||| Sbjct: 91568 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 91627 Query: 334 cccaacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgag 393 || || || || | || ||||||||||| | || || ||||||| | ||||||| ||| Sbjct: 91628 ccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgag 91687 Query: 394 ctgcagcg 401 || ||||| Sbjct: 91688 ctccagcg 91695
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 154 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 213 |||||||||||||| || |||||| |||| || |||||||||||||||| || || ||| Sbjct: 33251 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 33310 Query: 214 caacgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtc 273 || || ||||| || ||||| | ||| ||||| || || |||||||| || || || ||| Sbjct: 33311 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 33370 Query: 274 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 333 ||||| |||||||||||||| |||||||| || || |||||||| |||||| |||||| Sbjct: 33371 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 33430 Query: 334 cccaacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgag 393 || || || || | || ||||||||||| | || || ||||||| | ||||||| ||| Sbjct: 33431 ccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgag 33490 Query: 394 ctgcagcg 401 || ||||| Sbjct: 33491 ctccagcg 33498
>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full insert sequence Length = 3139 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 154 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 213 |||||||||||||| || |||||| |||| || |||||||||||||||| || || ||| Sbjct: 212 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 271 Query: 214 caacgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtc 273 || || ||||| || ||||| | ||| ||||| || || |||||||| || || || ||| Sbjct: 272 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 331 Query: 274 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 333 ||||| |||||||||||||| |||||||| || || |||||||| |||||| |||||| Sbjct: 332 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 391 Query: 334 cccaacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgag 393 || || || || | || ||||||||||| | || || ||||||| | ||||||| ||| Sbjct: 392 ccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgag 451 Query: 394 ctgcagcg 401 || ||||| Sbjct: 452 ctccagcg 459
>dbj|AK059244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G02, full insert sequence Length = 1164 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 154 aagatgagcgtggttgggtttgatttaggcaacgagagctgcattgtgggggtggcacgg 213 |||||||||||||| || |||||| |||| || |||||||||||||||| || || ||| Sbjct: 158 aagatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcgg 217 Query: 214 caacgtggcatcgacgtggttcccaatgaggaatccaaacgggagacccctgccatcgtc 273 || || ||||| || ||||| | ||| ||||| || || |||||||| || || || ||| Sbjct: 218 cagcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtc 277 Query: 274 tgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccaccatgaac 333 ||||| |||||||||||||| |||||||| || || |||||||| |||||| |||||| Sbjct: 278 tgcttcggcgacaagcagcggttcatcgggacagcgggcgctgcttcctccacgatgaac 337 Query: 334 cccaacaactccatctcacagatcaagcgcttgctgggccgcaagttcgctgatcccgag 393 || || || || | || ||||||||||| | || || ||||||| | ||||||| ||| Sbjct: 338 ccgaagaattctgtttctcagatcaagcggctcctcgggcgcaagtactctgatcctgag 397 Query: 394 ctgcagcg 401 || ||||| Sbjct: 398 ctccagcg 405
>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.1 mRNA, complete cds Length = 2941 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 268 atcgtctgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccacc 327 ||||| |||||||| |||||||||||||||||||| ||||| || ||||| ||| Sbjct: 255 atcgtttgctttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatg 314 Query: 328 atgaaccccaacaactccatctcacagatcaagcgctt 365 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 315 atgaaccccaaaaactccatctcacaaatcaagcgctt 352
>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.2 mRNA, complete cds Length = 2941 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 268 atcgtctgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccacc 327 ||||| |||||||| |||||||||||||||||||| ||||| || ||||| ||| Sbjct: 255 atcgtttgctttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatg 314 Query: 328 atgaaccccaacaactccatctcacagatcaagcgctt 365 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 315 atgaaccccaaaaactccatctcacaaatcaagcgctt 352
>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence Length = 2952 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 268 atcgtctgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccacc 327 ||||| |||||||| |||||||||||||||||||| ||||| || ||||| ||| Sbjct: 248 atcgtttgctttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatg 307 Query: 328 atgaaccccaacaactccatctcacagatcaagcgctt 365 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 308 atgaaccccaaaaactccatctcacaaatcaagcgctt 345
>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920; F19K16.12) mRNA, complete cds Length = 2850 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 268 atcgtctgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccacc 327 ||||| |||||||| |||||||||||||||||||| ||||| || ||||| ||| Sbjct: 255 atcgtttgctttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatg 314 Query: 328 atgaaccccaacaactccatctcacagatcaagcgctt 365 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 315 atgaaccccaaaaactccatctcacaaatcaagcgctt 352
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 268 atcgtctgctttggcgacaagcagcgcttcatcggcactgcaggcgctgccaactccacc 327 ||||| |||||||| |||||||||||||||||||| ||||| || ||||| ||| Sbjct: 42067 atcgtttgctttggtgacaagcagcgcttcatcggtactgctggagctgcttctaccatg 42126 Query: 328 atgaaccccaacaactccatctcacagatcaagcgctt 365 ||||||||||| |||||||||||||| ||||||||||| Sbjct: 42127 atgaaccccaaaaactccatctcacaaatcaagcgctt 42164 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 238 aatgaggaatccaaacgggagacccctgccatcgtctgctttggcgacaagcagcgcttc 297 ||||| || ||||| || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 37194 aatgatgagtccaatcgtgagactcctgctattgtctgcttcggtgacaagcagcgcttc 37253 Query: 298 atcggcactgcaggcgctgc 317 ||||||||||| || ||||| Sbjct: 37254 atcggcactgctggagctgc 37273
>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.1 mRNA, complete cds Length = 2949 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 238 aatgaggaatccaaacgggagacccctgccatcgtctgctttggcgacaagcagcgcttc 297 ||||| || ||||| || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 232 aatgatgagtccaatcgtgagactcctgctattgtctgcttcggtgacaagcagcgcttc 291 Query: 298 atcggcactgcaggcgctgc 317 ||||||||||| || ||||| Sbjct: 292 atcggcactgctggagctgc 311
>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.2 mRNA, complete cds Length = 3012 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 238 aatgaggaatccaaacgggagacccctgccatcgtctgctttggcgacaagcagcgcttc 297 ||||| || ||||| || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 276 aatgatgagtccaatcgtgagactcctgctattgtctgcttcggtgacaagcagcgcttc 335 Query: 298 atcggcactgcaggcgctgc 317 ||||||||||| || ||||| Sbjct: 336 atcggcactgctggagctgc 355
>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds Length = 2798 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 238 aatgaggaatccaaacgggagacccctgccatcgtctgctttggcgacaagcagcgcttc 297 ||||| || ||||| || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 232 aatgatgagtccaatcgtgagactcctgctattgtctgcttcggtgacaagcagcgcttc 291 Query: 298 atcggcactgcaggcgctgc 317 ||||||||||| || ||||| Sbjct: 292 atcggcactgctggagctgc 311
>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds Length = 2496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 238 aatgaggaatccaaacgggagacccctgccatcgtctgctttggcgacaagcagcgcttc 297 ||||| || ||||| || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 82 aatgatgagtccaatcgtgagactcctgctattgtctgcttcggtgacaagcagcgcttc 141 Query: 298 atcggcactgcaggcgctgc 317 ||||||||||| || ||||| Sbjct: 142 atcggcactgctggagctgc 161
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 238 aatgaggaatccaaacgggagacccctgccatcgtctgctttggcgacaagcagcgcttc 297 ||||| || ||||| || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 3750 aatgatgagtccaatcgtgagactcctgctattgtctgcttcggtgacaagcagcgcttc 3691 Query: 298 atcggcactgcaggcgctgc 317 ||||||||||| || ||||| Sbjct: 3690 atcggcactgctggagctgc 3671
>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein Length = 2923 Score = 69.9 bits (35), Expect = 7e-09 Identities = 158/199 (79%) Strand = Plus / Plus Query: 167 ttgggtttgatttaggcaacgagagctgcattgtgggggtggcacggcaacgtggcatcg 226 ||||||||||||| || ||||||| ||| |||| | || ||| ||||| | || |||| Sbjct: 164 ttgggtttgatttcggaaacgagaattgccttgttgccgttgcaaggcaaagaggtatcg 223 Query: 227 acgtggttcccaatgaggaatccaaacgggagacccctgccatcgtctgctttggcgaca 286 |||| || | ||||| || ||||| || ||||| ||||| || |||||||| || |||| Sbjct: 224 acgtcgtgcttaatgatgagtccaatcgtgagacgcctgctattgtctgcttcggtgaca 283 Query: 287 agcagcgcttcatcggcactgcaggcgctgccaactccaccatgaaccccaacaactcca 346 | ||||||||||||||||||| || ||||| ||| ||||||||||| ||||||| Sbjct: 284 acgagcgcttcatcggcactgctggagctgcttctaccatgatgaaccccaaaaactcca 343 Query: 347 tctcacagatcaagcgctt 365 |||| || || |||||||| Sbjct: 344 tctctcaaattaagcgctt 362
>ref|NM_125086.2| Arabidopsis thaliana catalytic/ lactoylglutathione lyase AT5G57040 mRNA, complete cds Length = 854 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atgaaccccaacaactccat 347 |||||||||||||||||||| Sbjct: 370 atgaaccccaacaactccat 351
>gb|AC110227.6| Mus musculus chromosome 9, clone RP24-331H14, complete sequence Length = 196758 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 tcccatttcttgtctctgag 435 |||||||||||||||||||| Sbjct: 49594 tcccatttcttgtctctgag 49575
>gb|AC118772.5| Rattus norvegicus 10 BAC CH230-404C20 (Children's Hospital Oakland Research Institute) complete sequence Length = 178272 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 cccatttcttgtctctgagg 436 |||||||||||||||||||| Sbjct: 28233 cccatttcttgtctctgagg 28214
>emb|BX470135.8| Zebrafish DNA sequence from clone RP71-15H20 in linkage group 8, complete sequence Length = 147292 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 ccatgaaccccaacaactccatct 349 ||||||||||||||||| |||||| Sbjct: 4218 ccatgaaccccaacaacaccatct 4195
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 agatcaagcgcttgctgggc 372 |||||||||||||||||||| Sbjct: 440572 agatcaagcgcttgctgggc 440553
>ref|XM_692958.1| PREDICTED: Danio rerio similar to Hsp70 protein (LOC569562), mRNA Length = 2303 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 ccatgaaccccaacaactccatct 349 ||||||||||||||||| |||||| Sbjct: 179 ccatgaaccccaacaacaccatct 202
>gb|BT024587.1| Arabidopsis thaliana At5g57040 mRNA, complete cds Length = 594 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atgaaccccaacaactccat 347 |||||||||||||||||||| Sbjct: 240 atgaaccccaacaactccat 221
>gb|AF386787.1|AF386787 Paracoccidioides brasiliensis heat shock protein 70 (Hsp70) mRNA, complete cds Length = 1965 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ggccgcaagttcgctgatcc 389 |||||||||||||||||||| Sbjct: 217 ggccgcaagttcgctgatcc 236
>gb|AY088499.1| Arabidopsis thaliana clone 7233 mRNA, complete sequence Length = 781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atgaaccccaacaactccat 347 |||||||||||||||||||| Sbjct: 297 atgaaccccaacaactccat 278
>emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on chromosome 2, complete sequence Length = 219412 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gctgccaactccaccatgaa 332 |||||||||||||||||||| Sbjct: 206310 gctgccaactccaccatgaa 206291
>dbj|AB024035.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHM17 Length = 78423 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atgaaccccaacaactccat 347 |||||||||||||||||||| Sbjct: 68951 atgaaccccaacaactccat 68970
>gb|AF026516.1|AF026516 Funiculina quadrangularis heat-shock protein Hsp70 mRNA, partial cds Length = 1404 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 ccatgaaccccaacaactccatct 349 ||||||||||||||||| |||||| Sbjct: 77 ccatgaaccccaacaacaccatct 100
>emb|AL773601.11| Zebrafish DNA sequence from clone CH211-199O1, complete sequence Length = 201299 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 ccatgaaccccaacaactccatct 349 ||||||||||||||||| |||||| Sbjct: 17559 ccatgaaccccaacaacaccatct 17536 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,418,671 Number of Sequences: 3902068 Number of extensions: 3418671 Number of successful extensions: 52816 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52668 Number of HSP's gapped (non-prelim): 138 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)