>YKP1_KLULA (P05467) Hypothetical killer plasmid pGKl-2 protein 1|
          Length = 224

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 173 VSYLDLVALFACLRLYERLDRHSPRRERIKAAVWALTTLLTVMFTYKVAEVMPLAFKLVV 352
           +SY+D +A       Y+R D       RIK  +     L+ +MF+ +  +  P   K+  
Sbjct: 1   MSYIDYLAYTGNTTFYDRFDGDLTSEHRIKCIINGC--LINIMFSIRTIKEFPEEIKICQ 58

Query: 353 WAMAAATTCG 382
            A++   TCG
Sbjct: 59  AAVSKFLTCG 68

>SECY_METTH (O26134) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 456

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
 Frame = +2

Query: 143 GDAGSVIFVAVSYLDLVALFACLRLYERLDRHSPRRERIKAAVWALTTLLTVMFTYKVAE 322
           G+ GS++ + +  +   ++   L +  ++ +    R   KA    L  LL ++FT+  A 
Sbjct: 69  GNFGSILTLGIGPIVSASIILQLLVGGKILKLDLSRHEDKAFFQGLQKLLAIVFTFFEAL 128

Query: 323 VMPLAFKLV------VWAMAAATTCGGFYVFFL 403
           +  L   L       VW +    T GG  + FL
Sbjct: 129 IFVLTGSLAPSAPQFVWVLILQLTIGGILIIFL 161

>KUP_CAUCR (Q9ABT9) Probable potassium transport system protein kup|
          Length = 665

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 278 LTTLLTVMFTYKVAEVMPLAFKLVVWAMAAATTCGGFYV 394
           L  +L +MFT++ +  +  A+ L V      TTC  F V
Sbjct: 390 LLGVLAIMFTFQTSSALAHAYGLAVTGTMIVTTCMAFIV 428

>QUEA_DEIRA (Q9RU19) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC|
           5.-.-.-) (Queuosine biosynthesis protein queA)
          Length = 362

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 34  GSAVRSSIGDGGVLVAHGARVRLPDL 111
           G+AVR+  G+  + +  G RV +PDL
Sbjct: 283 GAAVRAGAGETRIFITPGTRVEVPDL 308


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,258,811
Number of Sequences: 219361
Number of extensions: 507957
Number of successful extensions: 1630
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)