Clone Information

BLAST Search Result

Clone Name	bastl29h04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	WDR75_BRARE (Q7ZVR1) WD-repeat protein 75	50	2e-06
2	WDR75_XENLA (Q6DFC6) WD-repeat protein 75	50	4e-06
3	WDR75_HUMAN (Q8IWA0) WD-repeat protein 75	40	0.003
4	WDR41_MOUSE (Q3UDP0) WD-repeat protein 41	39	0.005
5	GBLP_TRYBR (P69104) Guanine nucleotide-binding protein beta subu...	39	0.007
6	GBLP_TRYBB (P69103) Guanine nucleotide-binding protein beta subu...	39	0.007
7	MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer ...	38	0.011
8	MORG1_RAT (Q5BLX8) Mitogen-activated protein kinase organizer 1 ...	37	0.019
9	MORG1_MOUSE (Q9DAJ4) Mitogen-activated protein kinase organizer ...	37	0.025
10	YL409_YEAST (Q06078) Hypothetical 104.8 kDa Trp-Asp repeats-cont...	37	0.025
11	WDR67_XENTR (Q6DEY8) WD-repeat protein 67	36	0.056
12	YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in c...	36	0.056
13	PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20	36	0.056
14	MORG1_HUMAN (Q9BRX9) Mitogen-activated protein kinase organizer ...	35	0.073
15	HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1	35	0.095
16	TAF5_DROME (P49846) Transcription initiation factor TFIID subuni...	35	0.095
17	TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12	35	0.095
18	GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subu...	35	0.095
19	WDR41_HUMAN (Q9HAD4) WD-repeat protein 41	35	0.12
20	CDC4_CANAL (P53699) Cell division control protein 4	34	0.16
21	POP1_SCHPO (P87060) WD-repeat protein pop1	34	0.16
22	Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491	33	0.28
23	GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subu...	33	0.36
24	WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A	33	0.47
25	GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 pro...	33	0.47
26	TUP1_CANAL (P56093) Transcriptional repressor TUP1	32	0.81
27	MORG1_XENLA (Q3KQ62) Mitogen-activated protein kinase organizer ...	32	0.81
28	APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)	32	1.1
29	WDR67_MOUSE (Q6NXY1) WD-repeat protein 67 (Protein 4-B-3)	32	1.1
30	Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409	32	1.1
31	YDE3_SCHPO (Q10437) Hypothetical WD-repeat protein C12B10.03 in ...	32	1.1
32	WDR67_HUMAN (Q96DN5) WD-repeat protein 67	31	1.4
33	TEP1_MOUSE (P97499) Telomerase protein component 1 (Telomerase-a...	31	1.4
34	GBB_YEAST (P18851) Guanine nucleotide-binding protein beta subunit	31	1.4
35	TUP1_KLULA (P56094) Transcriptional repressor TUP1	31	1.8
36	WDR67_XENLA (Q6DDI6) WD-repeat protein 67	31	1.8
37	GBLP_CHLRE (P25387) Guanine nucleotide-binding protein beta subu...	31	1.8
38	PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	31	1.8
39	YE85_SCHPO (O14301) Hypothetical WD-repeat protein C9G1.05 in ch...	30	2.3
40	SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein cl...	30	2.3
41	MORG1_XENTR (Q5XGI5) Mitogen-activated protein kinase organizer ...	30	2.3
42	CYS14_NEUCR (P23622) Sulfate permease 2 (Sulfate permease II)	30	4.0
43	SCAP_CRIGR (P97260) Sterol regulatory element-binding protein cl...	30	4.0
44	RHAB_OCEIH (Q8ESX1) Rhamnulokinase (EC 2.7.1.5) (Rhamnulose kinase)	30	4.0
45	DIVL_CAUCR (Q9RQQ9) Sensor protein divL (EC 2.7.13.3)	30	4.0
46	GBB5_MOUSE (P62881) Guanine nucleotide-binding protein beta subu...	29	5.2
47	GBB5_HUMAN (O14775) Guanine nucleotide-binding protein beta subu...	29	5.2
48	GBB2_DROME (P29829) Guanine nucleotide-binding protein beta subu...	29	5.2
49	GBB1_DROME (P26308) Guanine nucleotide-binding protein beta subu...	29	5.2
50	GBB5_TAMST (Q80ZD0) Guanine nucleotide-binding protein beta subu...	29	5.2
51	GBB5_RAT (P62882) Guanine nucleotide-binding protein beta subuni...	29	5.2
52	GBB5_RABIT (Q6PNB6) Guanine nucleotide-binding protein beta subu...	29	5.2
53	GBB5_PONPY (Q5RDY7) Guanine nucleotide-binding protein beta subu...	29	5.2
54	WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A	29	5.2
55	UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated ...	29	5.2
56	TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transdu...	29	5.2
57	IF32_YEAST (P40217) Eukaryotic translation initiation factor 3 3...	29	6.8
58	VG24_BPT4 (P19896) Head vertex protein Gp24	29	6.8
59	TEP1_RAT (O08653) Telomerase protein component 1 (rTLP1) (Telome...	29	6.8
60	PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkw...	29	6.8
61	Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163	29	6.8
62	LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG	29	6.8
63	TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transduc...	28	8.9
64	UNC37_CAEEL (O02482) Transcription factor unc-37 (Uncoordinated ...	28	8.9
65	POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11	28	8.9
66	COFE_METAC (Q8TUD3) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)	28	8.9
67	WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A	28	8.9
68	POP3_SCHPO (O74184) WD-repeat protein pop3 (WD-repeat protein wat1)	28	8.9
69	GBLP_NEUCR (Q01369) Guanine nucleotide-binding protein beta subu...	28	8.9

>WDR75_BRARE (Q7ZVR1) WD-repeat protein 75|
          Length = 832

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 30/98 (30%), Positives = 41/98 (41%)
 Frame = +2

Query: 131 GGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNA 310
           GG      PP  S D RF+L  SG SV V+ST T   +  L+GH   VT +   P     
Sbjct: 13  GGSKINFRPPIISHDSRFVLCVSGDSVKVYSTRTEEWLHNLQGHNNQVTGIAFNPAN--- 69

Query: 311 AATAKLASHCWTAGLDGFLIYWDFATAELVRKVKVDAP 424
                     ++   DG +  WDF    L++   +  P
Sbjct: 70  ------QLQVYSCSADGTVKLWDFIDGILIKTFVIGYP 101

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>WDR75_XENLA (Q6DFC6) WD-repeat protein 75|
          Length = 832

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 29/92 (31%), Positives = 44/92 (47%)
 Frame = +2

Query: 128 TGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGN 307
           +GG         FSADG++L+  SG  + V+STST   +  L+GH   VT + + P    
Sbjct: 12  SGGSKLDYRRSVFSADGKYLICVSGDFIKVYSTSTEECIHALQGHRKLVTGIELNP---- 67

Query: 308 AAATAKLASHCWTAGLDGFLIYWDFATAELVR 403
                K     ++  LDG +  WDF    L++
Sbjct: 68  -----KNHLQLYSCSLDGTIKLWDFTDGILIK 94

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>WDR75_HUMAN (Q8IWA0) WD-repeat protein 75|
          Length = 830

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 26/91 (28%), Positives = 38/91 (41%)
 Frame = +2

Query: 131 GGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNA 310
           GG         FSAD +++   SG  V V+ST T   V  L GH   VT + + P     
Sbjct: 13  GGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNLVTGIQLNPNN--- 69

Query: 311 AATAKLASHCWTAGLDGFLIYWDFATAELVR 403
                     ++  LDG +  WD+    L++
Sbjct: 70  ------HLQLYSCSLDGTIKLWDYIDGILIK 94

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>WDR41_MOUSE (Q3UDP0) WD-repeat protein 41|
          Length = 460

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 24/79 (30%), Positives = 38/79 (48%)
 Frame = +2

Query: 173 DGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAG 352
           D RF        + V++  TG  + EL GH   +TAV+  PP  +  A+++L     TA 
Sbjct: 54  DFRFASAGDDGIIVVWNAQTGEKLLELRGHTQKITAVIAFPPLDSCEASSQL---LLTAS 110

Query: 353 LDGFLIYWDFATAELVRKV 409
            D  +  WD  T   +++V
Sbjct: 111 ADRTVGVWDCDTGRQIQRV 129

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>GBLP_TRYBR (P69104) Guanine nucleotide-binding protein beta subunit-like|
           protein (Activated protein kinase C receptor homolog)
           (Track)
          Length = 318

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +2

Query: 209 VSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDGFLIYWDFAT 388
           V V+  +TG LV++L+GH   VT+V V P            S C ++  DG    WD   
Sbjct: 178 VKVWDLATGRLVTDLKGHTNYVTSVTVSPD----------GSLCASSDKDGVARLWDLTK 227

Query: 389 AELVRKVKVDAP 424
            E + ++   AP
Sbjct: 228 GEALSEMAAGAP 239

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>GBLP_TRYBB (P69103) Guanine nucleotide-binding protein beta subunit-like|
           protein (Activated protein kinase C receptor homolog)
          Length = 318

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +2

Query: 209 VSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDGFLIYWDFAT 388
           V V+  +TG LV++L+GH   VT+V V P            S C ++  DG    WD   
Sbjct: 178 VKVWDLATGRLVTDLKGHTNYVTSVTVSPD----------GSLCASSDKDGVARLWDLTK 227

Query: 389 AELVRKVKVDAP 424
            E + ++   AP
Sbjct: 228 GEALSEMAAGAP 239

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>MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +2

Query: 164 FSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           F+ADG +LL C S +S+ ++S S G L+    GH  +V          +A  +   +  C
Sbjct: 33  FNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVL---------DADGSYDNSQLC 83

Query: 341 WTAGLDGFLIYWDFATAELVRKVK 412
            +   D  +I WD A+ ++ RK++
Sbjct: 84  -SCSSDKTVILWDVASGQVTRKLR 106

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>MORG1_RAT (Q5BLX8) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
 Frame = +2

Query: 134 GQSYVSAPPAFSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNA 310
           GQ  V A   F+ DG + L C S +++ +++   G L+    GH  +V            
Sbjct: 24  GQGAVRAV-RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLD---------- 72

Query: 311 AATAKLASHCWTAGLDGFLIYWDFATAELVRKVK 412
           AA +   SH  + G D  ++ WD AT ++VRK +
Sbjct: 73  AAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFR 106



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
 Frame = +2

Query: 134 GQSYVSAPPAFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQG 304
           G  Y     A S D   L  CSG   ++V ++  +TG +V +  GH G V  V     Q 
Sbjct: 65  GHGYEVLDAAGSFDNSHL--CSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTV-----QF 117

Query: 305 NAAATAKLAS------HCW 343
           N  AT  L+        CW
Sbjct: 118 NEEATVILSGSIDSSVRCW 136

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>MORG1_MOUSE (Q9DAJ4) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +2

Query: 164 FSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           F+ DG + L C S +++ +++   G L+    GH  +V            AA +   SH 
Sbjct: 33  FNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLD----------AAGSFDNSHL 82

Query: 341 WTAGLDGFLIYWDFATAELVRKVK 412
            + G D  ++ WD AT ++VRK +
Sbjct: 83  CSGGGDKTVVLWDVATGQVVRKFR 106



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
 Frame = +2

Query: 134 GQSYVSAPPAFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQG 304
           G  Y     A S D   L  CSG   ++V ++  +TG +V +  GH G V  V     Q 
Sbjct: 65  GHGYEVLDAAGSFDNSHL--CSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTV-----QF 117

Query: 305 NAAATAKLAS------HCW 343
           N  AT  L+        CW
Sbjct: 118 NEEATVILSGSIDSSVRCW 136

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>YL409_YEAST (Q06078) Hypothetical 104.8 kDa Trp-Asp repeats-containing protein|
           in RPL31B-VIP1 intergenic region
          Length = 939

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +2

Query: 161 AFSADGRFLLVCSGR-SVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASH 337
           A S  G F  + S   S+++++  +G+L  + + H+  VT + +           K+ S 
Sbjct: 467 AMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTGISL------DGMNRKMVS- 519

Query: 338 CWTAGLDGFLIYWDFATAELVRKVKVDAPAT 430
               GLDG + ++DF  + L+ K+K+DAP T
Sbjct: 520 ---CGLDGIVGFYDFNKSTLLGKLKLDAPIT 547

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>WDR67_XENTR (Q6DEY8) WD-repeat protein 67|
          Length = 1088

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +2

Query: 182 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCW 343
           FL+  +  SV  F T    LVS + GHE  VT++ V P    A  T+   +  W
Sbjct: 99  FLVALADNSVKCFDTGAKELVSWMRGHESAVTSISVHPSGRYAVTTSSDTAQLW 152

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>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III|
          Length = 902

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 344 TAGLDGFLIYWDFATAELVRKVKVDAPATHGDSQHS 451
           TA LDG L +WDF    L+  + V +  TH   QHS
Sbjct: 506 TASLDGILKFWDFNKGNLIDSLDVGSSITHAIYQHS 541



 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
 Frame = +2

Query: 188 LVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCW--TAGLDG 361
           + C    + +    T  +V EL GH   +T+        + + T +     W  TA LDG
Sbjct: 547 VACDDFGIRIVDVQTRKIVRELWGHSNRLTSF-------DFSDTGR-----WLVTASLDG 594

Query: 362 FLIYWDFATAELVRKVKVDAPAT 430
            +  WD  T  L+  +   +  T
Sbjct: 595 TIRTWDLPTGHLIDSISTPSVCT 617

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>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20|
          Length = 606

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +2

Query: 107 AAVAAMITGGQSYVSAPPAFSADGRFLLV-CSGRSVSVFSTSTGMLVSELEGHEGDVTAV 283
           A VA + TG   + +    F   G+ L V C    V  +ST+ G+L +EL GHE  V AV
Sbjct: 527 AEVATINTG--KHPANKSCFDRSGQVLAVACDDGKVKAYSTTDGVLQAELAGHEDAVQAV 584

Query: 284 VVVP 295
           +  P
Sbjct: 585 LFDP 588

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>MORG1_HUMAN (Q9BRX9) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 35.4 bits (80), Expect = 0.073
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = +2

Query: 134 GQSYVSAPPAFSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNA 310
           GQ  V A   F+ DG + L C S +++ +++   G L+    GH  +V          +A
Sbjct: 24  GQGAVRAV-RFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVL---------DA 73

Query: 311 AATAKLASHCWTAGLDGFLIYWDFATAELVRKVK 412
           A +   +S C + G D  ++ WD A+ ++VRK +
Sbjct: 74  AGSFDNSSLC-SGGGDKAVVLWDVASGQVVRKFR 106

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>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1|
          Length = 1356

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
 Frame = +2

Query: 161  AFSADG-RFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASH 337
            AFS DG R     S +++ ++ T++G     LEGH G V +V   P     A+ +     
Sbjct: 1184 AFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---- 1239

Query: 338  CWTAGLDGFLIYWDFATAELVRKVKVDAPAT 430
                  D  +  WD A+    + + V + AT
Sbjct: 1240 ------DNTIKIWDTASGTCTQTLNVGSTAT 1264



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +2

Query: 134  GQSYVSAPPAFSADGRFLLVCSG-RSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 295
            G S +S   AFS DG+ +   SG +++ ++ T++G     LEGH G V +V   P
Sbjct: 967  GSSVLSV--AFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSP 1019



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +2

Query: 134  GQSYVSAPPAFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQG 304
            G S +S   AFSADG+   V SG   +++ ++ T++G     LEGH G V +V   P + 
Sbjct: 841  GSSVLSV--AFSADGQ--RVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRE 896

Query: 305  NAAA 316
              A+
Sbjct: 897  RVAS 900



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +2

Query: 161  AFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 295
            AFS DG+   V SG   +++ ++ T++G     LEGH G V +VV  P
Sbjct: 1016 AFSPDGQ--RVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP 1061



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = +2

Query: 161  AFSADGRFLLVCSGR---SVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLA 331
            AFS DG+   V SG    ++ ++  ++G     LEGH G V +V   P     A      
Sbjct: 1100 AFSPDGQ--RVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA------ 1151

Query: 332  SHCWTAGLDGFLIYWDFAT 388
                +  +DG +  WD A+
Sbjct: 1152 ----SGSIDGTIKIWDAAS 1166

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>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 85 kDa subunit)
           (p85) (TAFII-80)
          Length = 704

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = +2

Query: 122 MITGGQSYVSAPPAFSADGRFLLVCS-GRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPP 298
           ++TG +  VS+  AFSA GR+L   S   ++ ++  S G LV+ L  H   VT +     
Sbjct: 571 LMTGHKGSVSSL-AFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRD 629

Query: 299 QGNAAATAKLASHCWTAGLDGFLIYWDFATAELVRKVKVDAPATHGDSQHSKH*SD 466
               AA          AGLD  L  WDF       KV  D  + H    H +  +D
Sbjct: 630 GTVLAA----------AGLDNNLTLWDF------HKVTEDYISNHITVSHHQDEND 669

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>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12|
          Length = 586

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
 Frame = +2

Query: 104 PAAVAAMITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVS----ELEGHEGD 271
           P +V  + T   + V     FSADG+FL     R+  VF+  TG L++    E    EGD
Sbjct: 275 PISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGD 334

Query: 272 V-TAVVVVPPQGNAAAT 319
           +    V   P G   AT
Sbjct: 335 LYVRSVAFSPDGKYLAT 351



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 295
           FS DG+F+   S   V    TS+G LV +L GHE  V +V   P
Sbjct: 425 FSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSP 468

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>GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subunit-like|
           protein (GPB-LR) (RWD)
          Length = 334

 Score = 35.0 bits (79), Expect = 0.095
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = +2

Query: 203 RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDGFLIYWDF 382
           R+V V++ +   L   LEGH G V AV V P            S C + G DG  + WD 
Sbjct: 189 RTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPD----------GSLCASGGKDGVTLLWDL 238

Query: 383 A 385
           A
Sbjct: 239 A 239

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>WDR41_HUMAN (Q9HAD4) WD-repeat protein 41|
          Length = 459

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 23/79 (29%), Positives = 35/79 (44%)
 Frame = +2

Query: 173 DGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAG 352
           D RF        V V++  TG  + EL GH   +TA++  P   +     +L     TA 
Sbjct: 54  DYRFASAGDDGIVVVWNAQTGEKLLELNGHTQKITAIITFPSLESCEEKNQL---ILTAS 110

Query: 353 LDGFLIYWDFATAELVRKV 409
            D  +I WD  T   V+++
Sbjct: 111 ADRTVIVWDGDTTRQVQRI 129

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>CDC4_CANAL (P53699) Cell division control protein 4|
          Length = 684

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +2

Query: 203 RSVSVFSTSTGMLVSELEGHEGDVTAV 283
           + +S++ST TG L+  LEGHEG V A+
Sbjct: 345 KCISIYSTQTGQLMKVLEGHEGGVWAL 371

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>POP1_SCHPO (P87060) WD-repeat protein pop1|
          Length = 775

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDV 274
           F  D   +  CS R ++++ T TG+L+  LE HEGDV
Sbjct: 414 FDDDKIIVSTCSPR-INIYDTKTGVLIRSLEEHEGDV 449



 Score = 32.3 bits (72), Expect = 0.62
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +2

Query: 206 SVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDGFLIYWDFA 385
           ++ V+  STG+ +  L GH G V +V + P +            C +AG D  +  W+  
Sbjct: 598 TLRVWKASTGVCLHVLRGHVGRVYSVTINPSR----------QQCISAGTDAKIRIWNLE 647

Query: 386 TAELVR 403
           + EL++
Sbjct: 648 SGELLQ 653

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>Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491|
          Length = 348

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/81 (28%), Positives = 36/81 (44%)
 Frame = +2

Query: 161 AFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           A SADG++L + +  +V V     GM V  L GH   V+  V   P G    +       
Sbjct: 110 AISADGQWLAIAADNNVDVRRVRDGMRVETLVGHTDKVSG-VAFSPDGETIVS------- 161

Query: 341 WTAGLDGFLIYWDFATAELVR 403
             +G D  +  W+ A+  L++
Sbjct: 162 -VSGGDRTIRIWERASGNLIQ 181

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>GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subunit 2|
          Length = 356

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 22/88 (25%), Positives = 38/88 (43%)
 Frame = +2

Query: 140 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAAT 319
           SY+S      +D   L      + +++   +G L+    GH GDV A+ V  P+ +   T
Sbjct: 157 SYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDV--PKCDTGNT 214

Query: 320 AKLASHCWTAGLDGFLIYWDFATAELVR 403
                   +AG D   + WD  + + V+
Sbjct: 215 ------FISAGADKHSLVWDIRSGQCVQ 236

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>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A|
          Length = 407

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +2

Query: 164 FSADGRFLLVCSG-RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           FS DGR ++  S  ++V ++  S+   V     H G VT  V   P G   A A      
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVT-YVDFHPSGTCIAAA------ 205

Query: 341 WTAGLDGFLIYWDFATAELVRKVKVDAPATHGDSQH 448
              G+D  +  WD  T  L++  ++ + A +G S H
Sbjct: 206 ---GMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFH 238

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>GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 protein)|
           (E(spl)m9/10)
          Length = 719

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +2

Query: 194 CSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDGFLIY 373
           CS  +++V+     +LV + +GH  D  + + + P G         S  WT GLD  +  
Sbjct: 542 CSDGNIAVWDLHNEILVRQFQGHT-DGASCIDISPDG---------SRLWTGGLDNTVRS 591

Query: 374 WD 379
           WD
Sbjct: 592 WD 593

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>TUP1_CANAL (P56093) Transcriptional repressor TUP1|
          Length = 514

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRSVSVFSTSTGMLVSEL------EGHEGDVTA-------VVVVPPQG 304
           FS DG+F+     ++  VF+ +TG LV++L      E  + + TA        V   P G
Sbjct: 210 FSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDG 269

Query: 305 NAAATAKLASHCWTAGLDGFLIYWDFATAELVR 403
              A         T   D  +  WD +T  +++
Sbjct: 270 KLLA---------TGAEDKLIRIWDLSTKRIIK 293

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>MORG1_XENLA (Q3KQ62) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 314

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 164 FSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           F+ DG + + C S +S+ +++   G L+    GH  +V          + A +   +  C
Sbjct: 33  FNVDGNYCMTCGSDKSLKLWNPHKGSLLKTYSGHGYEVL---------DTAGSCDNSQLC 83

Query: 341 WTAGLDGFLIYWDFATAELVRKVK 412
            +   D  +I WD A  ++VRK +
Sbjct: 84  -SCSSDKTVILWDVAQGQVVRKFR 106

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>APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1248

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
 Frame = +2

Query: 161 AFSADGRFLLVCS-GRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASH 337
           AFS D RF+  CS  + V ++++ TG LV   + H   V          N++    LA  
Sbjct: 664 AFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFT----NSSHHLLLA-- 717

Query: 338 CWTAGLDGFLIYWDFATAE 394
             T   D FL  WD    E
Sbjct: 718 --TGSSDCFLKLWDLNQKE 734

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>WDR67_MOUSE (Q6NXY1) WD-repeat protein 67 (Protein 4-B-3)|
          Length = 996

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = +2

Query: 182 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDG 361
           FL+  +  S+  F T T  LVS + GHE  V ++ V     +A+    + +   TA L  
Sbjct: 99  FLVALADYSIKCFDTVTKELVSWMRGHESSVCSISV-----HASGRYAITTSSDTAQL-- 151

Query: 362 FLIYWDFATAELVRKVKV 415
               WD  T +  RK+ +
Sbjct: 152 ----WDLDTFQRKRKLNI 165

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>Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409|
          Length = 326

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCW 343
           FS DG+FLL  +   V    T  G ++ +L+G +         PP  NA  +        
Sbjct: 57  FSPDGQFLLTAAADGVGTLWTKEGEMLGQLQGQK---------PPMFNARLSPD-RQILI 106

Query: 344 TAGLDGFLIYWD 379
           T G DG +  W+
Sbjct: 107 TTGYDGTIRLWN 118

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>YDE3_SCHPO (Q10437) Hypothetical WD-repeat protein C12B10.03 in chromosome I|
          Length = 543

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRS--VSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASH 337
           +S DG+F+ +  G+   VS++S     LV+  +GH+  VT V+    + +     ++AS 
Sbjct: 372 WSPDGKFIAI-GGKDDLVSIYSFPLRKLVARCQGHKSWVTDVIFDAWRCDDD-NYRIAS- 428

Query: 338 CWTAGLDGFLIYWDFATAELVR 403
               GLD  L+ WDF+ + + R
Sbjct: 429 ---VGLDRKLLLWDFSVSAIHR 447

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>WDR67_HUMAN (Q96DN5) WD-repeat protein 67|
          Length = 1066

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = +2

Query: 182 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDG 361
           FL+  +  S+  F T T  LVS + GHE  V ++ V     +A+    + +   TA L  
Sbjct: 99  FLVALADYSIKCFDTVTKELVSWMRGHESSVFSISV-----HASGKYAITTSSDTAQL-- 151

Query: 362 FLIYWDFATAELVRKVKV 415
               WD  T +  RK+ +
Sbjct: 152 ----WDLDTFQRKRKLNI 165

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>TEP1_MOUSE (P97499) Telomerase protein component 1 (Telomerase-associated|
            protein 1) (Telomerase protein 1) (p240) (p80 homolog)
          Length = 2629

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 21/79 (26%), Positives = 32/79 (40%)
 Frame = +2

Query: 161  AFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
            A++ D   +   S  SV +++   G  + +  GH+  V+AVV V              H 
Sbjct: 2122 AWTKDNILVSCSSDGSVGLWNPEAGQQLGQFSGHQSAVSAVVAV------------EEHI 2169

Query: 341  WTAGLDGFLIYWDFATAEL 397
             +   DG L  WD    EL
Sbjct: 2170 VSVSRDGTLKVWDHQGVEL 2188

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>GBB_YEAST (P18851) Guanine nucleotide-binding protein beta subunit|
          Length = 423

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +2

Query: 164 FSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLAS-- 334
           FSA GR +  C +     V+    G +V +LEGH G VT  V   P G A  T    S  
Sbjct: 357 FSASGRLMYSCYTDIGCVVWDVLKGEIVGKLEGHGGRVTG-VRSSPDGLAVCTGSWDSTM 415

Query: 335 HCWTAG 352
             W+ G
Sbjct: 416 KIWSPG 421

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>TUP1_KLULA (P56094) Transcriptional repressor TUP1|
          Length = 682

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLAS 334
           FS+DG FL     ++  V+  STG LV+ L     D +A    P   N   TA+ ++
Sbjct: 329 FSSDGEFLATGCNKTTQVYKVSTGELVARL----SDDSASQPQPQPQNQTVTAETST 381

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>WDR67_XENLA (Q6DDI6) WD-repeat protein 67|
          Length = 1089

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 23/78 (29%), Positives = 35/78 (44%)
 Frame = +2

Query: 182 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDG 361
           FL+  +  SV  F      LVS + GHE  VT++ +     +A+    + +   TA L  
Sbjct: 99  FLVALADNSVKCFDAGAKELVSWMRGHESAVTSISI-----HASGRYAVTTSSDTAQL-- 151

Query: 362 FLIYWDFATAELVRKVKV 415
               WD  T +  RK+ V
Sbjct: 152 ----WDLDTFQRKRKLNV 165

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>GBLP_CHLRE (P25387) Guanine nucleotide-binding protein beta subunit-like|
           protein
          Length = 318

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +2

Query: 203 RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDGFLIYWDF 382
           + V V++ +   L + L GH G V  V V P            S C + G DG  + WD 
Sbjct: 174 KMVKVWNLTNCKLKNNLVGHHGYVNTVTVSPD----------GSLCASGGKDGIAMLWDL 223

Query: 383 A 385
           A
Sbjct: 224 A 224

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>PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 472

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 24/100 (24%), Positives = 43/100 (43%)
 Frame = +2

Query: 104 PAAVAAMITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAV 283
           P  +  +ITG Q +V +      +  F    + +++ ++  +TG L   L GH   V A+
Sbjct: 152 PWEIYRVITGHQGWVRSVCVEPENQWFATGSADKTIKIWDLATGKLRLTLTGHIMGVRAL 211

Query: 284 VVVPPQGNAAATAKLASHCWTAGLDGFLIYWDFATAELVR 403
            V P             + ++ G D  +  WD  T ++VR
Sbjct: 212 GVSPRH----------PYMFSGGEDKMVKCWDLETNKVVR 241

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>YE85_SCHPO (O14301) Hypothetical WD-repeat protein C9G1.05 in chromosome I|
          Length = 595

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = +2

Query: 185 LLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDGF 364
           ++V S  +++  + S   ++  + GH+  +TA  + P           A+H +TA  DG 
Sbjct: 289 IVVNSKGNLTYLNPSDCKVIDTIYGHQRSITAATLSPD----------ATHFYTASYDGT 338

Query: 365 LIYWD 379
           ++ WD
Sbjct: 339 VLSWD 343

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>SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein|
            cleavage-activating protein (SREBP cleavage-activating
            protein) (SCAP)
          Length = 1278

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/81 (28%), Positives = 32/81 (39%)
 Frame = +2

Query: 167  SADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWT 346
            +A GR +      ++ VF       +  L+GH G +T V +         T  LAS    
Sbjct: 1086 AAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYI-------DQTMVLAS---- 1134

Query: 347  AGLDGFLIYWDFATAELVRKV 409
             G DG +  WD  T   V  V
Sbjct: 1135 GGQDGAICLWDVLTGSRVSHV 1155

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>MORG1_XENTR (Q5XGI5) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 314

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 164 FSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           F+ DG + + C S +++ +++   G L+    GH  +V          + A +   +  C
Sbjct: 33  FNVDGNYCMTCGSDKTLKLWNPHKGTLLKTYSGHGYEVL---------DTAGSYDNSQMC 83

Query: 341 WTAGLDGFLIYWDFATAELVRKVK 412
            +   D  +I WD A  ++VRK +
Sbjct: 84  -SCSSDKTVILWDVAQGQVVRKFR 106

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>CYS14_NEUCR (P23622) Sulfate permease 2 (Sulfate permease II)|
          Length = 819

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 272 VTAVVVVPPQGNAAATAKLASHCWTAGLD----GFLIYWDFATAE 394
           VT   VV PQG   A AKLA+     GL     GF++YW FAT++
Sbjct: 85  VTVGFVVVPQG--MAYAKLANLAPEYGLYTSFVGFVLYWAFATSK 127

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>SCAP_CRIGR (P97260) Sterol regulatory element-binding protein|
            cleavage-activating protein (SREBP cleavage-activating
            protein) (SCAP)
          Length = 1276

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = +2

Query: 167  SADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWT 346
            +A GR +      ++ VF       +  L+GH G +T V +         T  LAS    
Sbjct: 1084 AAAGRLVTGSQDHTLRVFRLEDSCCLFTLQGHSGAITTVYI-------DQTMVLAS---- 1132

Query: 347  AGLDGFLIYWDFATAELV 400
             G DG +  WD  T   V
Sbjct: 1133 GGQDGAICLWDVLTGSRV 1150

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>RHAB_OCEIH (Q8ESX1) Rhamnulokinase (EC 2.7.1.5) (Rhamnulose kinase)|
          Length = 470

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = -1

Query: 415 DLDLPHQLGGG-----EVPVDEETVEPSRPAVARELGGRRGVALRRHHDDGGDVPLVPLQ 251
           D+DL  QLG       ++   E  +   RP +  ELG    V L   HD G  V  VP Q
Sbjct: 190 DIDLIEQLGFNSNMFMDIQPPESVIGNLRPELQEELGVDFNVILPATHDTGSAVVAVPEQ 249

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>DIVL_CAUCR (Q9RQQ9) Sensor protein divL (EC 2.7.13.3)|
          Length = 769

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +2

Query: 308 AAATAKLASHCWTAGLDGFLIYWDFATAELVRKVKVDAPATHGDS 442
           AA    +   CW AG DG  I+ + A    V      APA  G S
Sbjct: 164 AAFVDSVVEPCWIAGADGQAIWGNAAFVRAVGAASAQAPALAGKS 208

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>GBB5_MOUSE (P62881) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 395

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQ-GNAAA 316
           +Y+SA    ++D + L      + +++   +G L+    GH  DV  + + P + GN   
Sbjct: 196 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 255

Query: 317 TAKLASHCWTAGLDGFLIYWDFATAELVR 403
                    + G D   + WD  + + V+
Sbjct: 256 ---------SGGCDKKAMVWDMRSGQCVQ 275

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>GBB5_HUMAN (O14775) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 395

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQ-GNAAA 316
           +Y+SA    ++D + L      + +++   +G L+    GH  DV  + + P + GN   
Sbjct: 196 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 255

Query: 317 TAKLASHCWTAGLDGFLIYWDFATAELVR 403
                    + G D   + WD  + + V+
Sbjct: 256 ---------SGGCDKKAMVWDMRSGQCVQ 275

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>GBB2_DROME (P29829) Guanine nucleotide-binding protein beta subunit 2|
          Length = 346

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 305 NAAATAKLASHCWTAGLDGFLIYWDFATAELVR 403
           N+   A  + HC T  LDG LI WD  TA  V+
Sbjct: 63  NSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQ 95

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>GBB1_DROME (P26308) Guanine nucleotide-binding protein beta subunit 1|
          Length = 340

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
 Frame = +2

Query: 113 VAAMITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVV 292
           V+  + G   Y+S    F  D + +      S  ++   TG+ V+   GH GDV A+ + 
Sbjct: 135 VSRELPGHGGYLSCC-RFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLA 193

Query: 293 PP-----QGNAAATAKL 328
           P       G   A+AKL
Sbjct: 194 PQCKTFVSGACDASAKL 210

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>GBB5_TAMST (Q80ZD0) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQ-GNAAA 316
           +Y+SA    ++D + L      + +++   +G L+    GH  DV  + + P + GN   
Sbjct: 154 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 213

Query: 317 TAKLASHCWTAGLDGFLIYWDFATAELVR 403
                    + G D   + WD  + + V+
Sbjct: 214 ---------SGGCDKKAMVWDMRSGQCVQ 233

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>GBB5_RAT (P62882) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQ-GNAAA 316
           +Y+SA    ++D + L      + +++   +G L+    GH  DV  + + P + GN   
Sbjct: 154 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 213

Query: 317 TAKLASHCWTAGLDGFLIYWDFATAELVR 403
                    + G D   + WD  + + V+
Sbjct: 214 ---------SGGCDKKAMVWDMRSGQCVQ 233

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>GBB5_RABIT (Q6PNB6) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQ-GNAAA 316
           +Y+SA    ++D + L      + +++   +G L+    GH  DV  + + P + GN   
Sbjct: 154 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 213

Query: 317 TAKLASHCWTAGLDGFLIYWDFATAELVR 403
                    + G D   + WD  + + V+
Sbjct: 214 ---------SGGCDKKAMVWDMRSGQCVQ 233

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>GBB5_PONPY (Q5RDY7) Guanine nucleotide-binding protein beta subunit 5|
           (Transducin beta chain 5) (Gbeta5)
          Length = 353

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQ-GNAAA 316
           +Y+SA    ++D + L      + +++   +G L+    GH  DV  + + P + GN   
Sbjct: 154 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 213

Query: 317 TAKLASHCWTAGLDGFLIYWDFATAELVR 403
                    + G D   + WD  + + V+
Sbjct: 214 ---------SGGCDKKAMVWDMRSGQCVQ 233

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>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A|
          Length = 407

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
 Frame = +2

Query: 164 FSADGRFLLVCSG-RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           FS DGR ++  S  ++V ++  ++   V     H G VT  V   P G   A A      
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT-YVDFHPSGTCIAAA------ 205

Query: 341 WTAGLDGFLIYWDFATAELVRKVKVDAPATHGDSQH 448
              G+D  +  WD  T  L++  ++ + A +  S H
Sbjct: 206 ---GMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFH 238

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>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3|
           snoRNA-associated protein 13)
          Length = 777

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +2

Query: 161 AFSADGRFLLVCSG-RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASH 337
           +F+   R L   SG R++ +++  T   V  LEGH G +  ++ +  QG           
Sbjct: 514 SFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYI-SQGTQVV------- 565

Query: 338 CWTAGLDGFLIYWDFATAELV 400
             +A  DG +  W  ++ E V
Sbjct: 566 --SAAADGLVKVWSLSSGECV 584



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/83 (21%), Positives = 33/83 (39%)
 Frame = +2

Query: 143 YVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATA 322
           YV+A    S   + +     R ++++   +G  +  ++ HE  V  + + P     A   
Sbjct: 63  YVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLA--- 119

Query: 323 KLASHCWTAGLDGFLIYWDFATA 391
                  T G +G +  WD A A
Sbjct: 120 -------TGGAEGLVKVWDIAGA 135

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>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like|
           1Y protein) (Transducin-beta-like 1, Y-linked)
          Length = 522

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCW 343
           +++DG  L + S    +   T  G L S L  H+G + A+             K  ++  
Sbjct: 243 WNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFAL----------KWNKKGNYVL 292

Query: 344 TAGLDGFLIYWDFATAELVRKVKV-DAPATHGDSQHS 451
           +AG+D   I WD  T E  ++     APA   D Q++
Sbjct: 293 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 329

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>IF32_YEAST (P40217) Eukaryotic translation initiation factor 3 39 kDa subunit|
           (eIF3 p39) (Translation initiation factor eIF3, p39
           subunit)
          Length = 347

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
 Frame = +2

Query: 164 FSADGRFLLVCS-GRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           ++ +G  L  CS   S SV+ +  G  +  L+GH G + ++ V               +C
Sbjct: 18  YNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV----------DCFTKYC 67

Query: 341 WTAGLDGFLIYWDFATAELVRKVKVDAP 424
            T   D  +  WD +  + V   K   P
Sbjct: 68  VTGSADYSIKLWDVSNGQCVATWKSPVP 95

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>VG24_BPT4 (P19896) Head vertex protein Gp24|
          Length = 427

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 421 GIDLDLPHQLGGGEVPVDEETVEPS 347
           G+DLD P  +G  +V VD E+++PS
Sbjct: 348 GLDLDDPEHVGAFKVVVDPESLQPS 372

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>TEP1_RAT (O08653) Telomerase protein component 1 (rTLP1)|
            (Telomerase-associated protein 1) (Telomerase protein 1)
            (p240) (p230) (p80 telomerase homolog)
          Length = 2629

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +2

Query: 185  LLVCSGR-SVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTAGLDG 361
            L+ CS   SV +++   G  + +  GH+  V+AVV V              H  +   DG
Sbjct: 2132 LISCSSDGSVGLWNPEAGQQLGQFPGHQSAVSAVVAV------------EEHIVSVSRDG 2179

Query: 362  FLIYWDFATAEL 397
             L  WD    EL
Sbjct: 2180 TLKVWDRQGVEL 2191

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>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC|
           2.7.11.1)
          Length = 742

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 161 AFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 295
           AFS DG  L+  S  +V ++  ++G  +   EGH   V AV   P
Sbjct: 634 AFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSP 678

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>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/73 (28%), Positives = 30/73 (41%)
 Frame = +2

Query: 164  FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCW 343
            FSADG+F++  S  + +      G  V    GHEG V            A  +  + +  
Sbjct: 1473 FSADGQFIVTASDDNTAGIWEIVGREVGICRGHEGPV----------YFAQFSADSRYIL 1522

Query: 344  TAGLDGFLIYWDF 382
            TA +D     WDF
Sbjct: 1523 TASVDNTARIWDF 1535

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>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG|
          Length = 931

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/74 (24%), Positives = 30/74 (40%)
 Frame = +2

Query: 131 GGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNA 310
           GG + +   P     G++L   S   V+V    T  +   L+GH   + +V   P     
Sbjct: 777 GGSTQIRFQPRV---GKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFL 833

Query: 311 AATAKLASHCWTAG 352
           A+ ++     WT G
Sbjct: 834 ASVSEDMVKVWTLG 847

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>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like|
           1X protein)
          Length = 527

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = +2

Query: 164 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCW 343
           +++DG  L   S    +   T  G L S L  H+G + A+             K  ++  
Sbjct: 246 WNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFAL----------KWNKKGNYIL 295

Query: 344 TAGLDGFLIYWDFATAELVRKVKV-DAPATHGDSQHS 451
           +AG+D   I WD  T E  ++     APA   D Q++
Sbjct: 296 SAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 332

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>UNC37_CAEEL (O02482) Transcription factor unc-37 (Uncoordinated protein 37)|
          Length = 612

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +2

Query: 161 AFSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASH 337
           A S D + L  C +  ++ ++     + V  L GH+   + + +          +K  + 
Sbjct: 423 AMSPDEKLLFACLADGNILIYDIHNKVKVGTLPGHQDGASCLDL----------SKDGTK 472

Query: 338 CWTAGLDGFLIYWDFATAELVRK 406
            W+ GLD  +  WD A  + V K
Sbjct: 473 LWSGGLDNSVRCWDLAQRKEVAK 495

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>POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11|
          Length = 506

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +2

Query: 173 DGRFLLV-CSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHCWTA 349
           +G+F++   S  ++ +F  S+G L+  L+GHE  +  V             K+ S     
Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTV--------RFNDEKIVS----G 445

Query: 350 GLDGFLIYWDFATAE 394
           G DG +  W+F T E
Sbjct: 446 GYDGTVRIWNFNTGE 460

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>COFE_METAC (Q8TUD3) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 254

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 125 ITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGH 262
           IT G+  ++       D RF+     RS  VF  +  MLV+ L GH
Sbjct: 56  ITPGEEALAIASRTGKDARFIQAVLSRSREVFVEAPFMLVTTLAGH 101

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>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A|
          Length = 405

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
 Frame = +2

Query: 164 FSADGRFLLVCSG-RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           FS DGR ++  S  ++V ++  ++   +     H G VT  V   P G   A A      
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVT-YVDFHPSGTCIAAA------ 205

Query: 341 WTAGLDGFLIYWDFATAELVRKVKVDAPATHGDSQH 448
              G+D  +  WD  T  L++  ++ + A +  S H
Sbjct: 206 ---GMDNTVKVWDARTHRLLQHYQLHSAAVNALSFH 238

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>POP3_SCHPO (O74184) WD-repeat protein pop3 (WD-repeat protein wat1)|
          Length = 314

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
 Frame = +2

Query: 167 SADGRFLLVCSGRSVSVF--STSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLASHC 340
           S D +FL       V ++  +TS+ M +   EGH  +VTA+               A HC
Sbjct: 49  SPDKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAI---------------AFHC 93

Query: 341 ---W--TAGLDGFLIYWDFATAELVRKVKVDAP 424
              W  T+  DG +  WD     + R     +P
Sbjct: 94  DGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSP 126

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>GBLP_NEUCR (Q01369) Guanine nucleotide-binding protein beta subunit-like|
           protein (Cross-pathway control WD-repeat protein cpc-2)
          Length = 316

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +2

Query: 134 GQSYVSAPPAFSADGRFLLVCS-GRSVSVFSTSTGMLVSELEGHEGDVTAV 283
           G S++ +    S+DG + L  S  +++ ++  STG       GH  DV +V
Sbjct: 61  GHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTNDVLSV 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,772,736
Number of Sequences: 219361
Number of extensions: 659216
Number of successful extensions: 2883
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 2774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2866
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result