Clone Name | bastl29g11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NID1_MOUSE (P10493) Nidogen-1 precursor (Entactin) | 29 | 2.5 | 2 | CD5L_HUMAN (O43866) CD5 antigen-like precursor (SP-alpha) (CT-2)... | 27 | 9.6 |
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>NID1_MOUSE (P10493) Nidogen-1 precursor (Entactin)| Length = 1245 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 242 HLGLS-VDVPDPFRSSRRDHPDPSASERELHEGGE 343 HLGL V P P S RR +PDP R L G E Sbjct: 301 HLGLEDVATPSPSHSPRRGYPDPHNVPRILSPGYE 335
>CD5L_HUMAN (O43866) CD5 antigen-like precursor (SP-alpha) (CT-2)| (IgM-associated peptide) Length = 347 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 98 GARRIWVDAGEVKAGGEVRSLEKKKRSLYGF 6 G RIW+D V+ GE +SLE+ + +GF Sbjct: 304 GVGRIWLD--NVRCSGEEQSLEQCQHRFWGF 332 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,322,009 Number of Sequences: 219361 Number of extensions: 505660 Number of successful extensions: 1800 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1758 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1800 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)