ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_460084.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 1.2
2gb|AC161033.18| Medicago truncatula clone mth2-57g13, complete s... 42 1.2
3emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 42 1.2
4gb|AC150876.29| Medicago truncatula clone mth2-28e19, complete s... 42 1.2
5gb|DQ399029.1| Ictalurus punctatus clone SRD01 hypothetical prot... 42 1.2
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
7dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
8dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
9gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
10gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
11gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
12ref|NM_175270.2| Mus musculus RIKEN cDNA 5730467H21 gene (573046... 40 4.6
13gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-... 40 4.6
14gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21... 40 4.6
15gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome ... 40 4.6
16ref|NM_023132.2| Mus musculus renin binding protein (Renbp), mRNA 40 4.6
17gb|BC034846.1| Mus musculus renin binding protein, mRNA (cDNA cl... 40 4.6
18gb|BC035455.1| Mus musculus renin binding protein, mRNA (cDNA cl... 40 4.6
19ref|XM_810033.1| Trypanosoma cruzi strain CL Brener protein kina... 40 4.6
20ref|XM_811193.1| Trypanosoma cruzi strain CL Brener protein kina... 40 4.6
21ref|XM_547897.2| PREDICTED: Canis familiaris similar to transcri... 40 4.6
22gb|BC014821.1| Mus musculus renin binding protein, mRNA (cDNA cl... 40 4.6
23gb|AC144726.6| Medicago truncatula clone mth2-7k13, complete seq... 40 4.6
24gb|BC004830.1| Mus musculus mRNA similar to renin-binding protei... 40 4.6
25emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 40 4.6
26gb|AF520061.1| Candida glabrata SOK1p (SOK1) gene, partial cds; ... 40 4.6
27dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 4.6
28gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.6
29dbj|AK137429.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 4.6
30dbj|AK146652.1| Mus musculus 17 days embryo stomach cDNA, RIKEN ... 40 4.6
31dbj|AK167648.1| Mus musculus 15 days pregnant adult female place... 40 4.6
32dbj|AK165608.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full... 40 4.6
33dbj|AK033423.1| Mus musculus adult male colon cDNA, RIKEN full-l... 40 4.6
34dbj|AK014347.1| Mus musculus 17 days embryo head cDNA, RIKEN ful... 40 4.6
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
37emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Co... 40 4.6
38gb|AY183138.1| Mus musculus renin-binding protein (Renbp) mRNA, ... 40 4.6
39ref|XM_223228.1| PREDICTED: Rattus norvegicus hypothetical LOC28... 40 4.6
40dbj|AK216097.1| Mus musculus cDNA, clone:Y2G0137D03, strand:minu... 40 4.6
41dbj|AK215192.1| Mus musculus cDNA, clone:Y2G0134E09, strand:minu... 40 4.6
42dbj|AK205945.1| Mus musculus cDNA, clone:Y2G0103E13, strand:minu... 40 4.6
43dbj|AK200509.1| Mus musculus cDNA, clone:Y1G0134M13, strand:minu... 40 4.6
44dbj|AK194143.1| Mus musculus cDNA, clone:Y1G0114H01, strand:minu... 40 4.6
45dbj|AK182381.1| Mus musculus cDNA, clone:Y0G0121M08, strand:plus... 40 4.6
46dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 4.6
47gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
48emb|AM167922.1| Zea mays mRNA for sialyltransferase like protein... 40 4.6
49dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 4.6
50emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on ch... 40 4.6 
>ref|XM_460084.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E18821g)
           partial mRNA
          Length = 3198

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 19  ctcctcttcttcttctccaag 39
           |||||||||||||||||||||
Sbjct: 975 ctcctcttcttcttctccaag 955
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>gb|AC161033.18| Medicago truncatula clone mth2-57g13, complete sequence
          Length = 109039

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    tcttcttctccaagctcctca 46
             |||||||||||||||||||||
Sbjct: 60515 tcttcttctccaagctcctca 60535
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 19      ctcctcttcttcttctccaag 39
               |||||||||||||||||||||
Sbjct: 1460139 ctcctcttcttcttctccaag 1460159
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>gb|AC150876.29| Medicago truncatula clone mth2-28e19, complete sequence
          Length = 91361

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    tcttcttctccaagctcctca 46
             |||||||||||||||||||||
Sbjct: 59902 tcttcttctccaagctcctca 59882
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>gb|DQ399029.1| Ictalurus punctatus clone SRD01 hypothetical protein mRNA, partial
           cds
          Length = 294

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 26  tcttcttctccaagctcctca 46
           |||||||||||||||||||||
Sbjct: 197 tcttcttctccaagctcctca 177
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 272     cccttccgctcctcccgccgc 292
               |||||||||||||||||||||
Sbjct: 8936623 cccttccgctcctcccgccgc 8936603
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>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0613F08
          Length = 142937

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 272    cccttccgctcctcccgccgc 292
              |||||||||||||||||||||
Sbjct: 141641 cccttccgctcctcccgccgc 141621
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>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0060K08
          Length = 159626

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 272  cccttccgctcctcccgccgc 292
            |||||||||||||||||||||
Sbjct: 9232 cccttccgctcctcccgccgc 9212
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>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10,
             complete sequence
          Length = 181130

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   tagttgtctccacctctcccatga 143
             ||||| ||||||||||||||||||
Sbjct: 24430 tagttctctccacctctcccatga 24453
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22
              map R10571S, complete sequence
          Length = 154441

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ctcctcttcttcttctccaa 38
              ||||||||||||||||||||
Sbjct: 137130 ctcctcttcttcttctccaa 137149
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>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0052O08 map MAP_LOC, complete sequence
          Length = 154839

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 178   gcacctgccggcggcggcgtcgca 201
             ||||||||||| ||||||||||||
Sbjct: 47217 gcacctgccggtggcggcgtcgca 47194
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>ref|NM_175270.2| Mus musculus RIKEN cDNA 5730467H21 gene (5730467H21Rik), mRNA
          Length = 3781

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 tccccgcacctgccggcggc 192
           ||||||||||||||||||||
Sbjct: 437 tccccgcacctgccggcggc 418
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>gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-309B4, CT7-567G9,
              MGSPI-15528, MGSPI-15530 complete sequence
          Length = 235497

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     gctcctcttcttcttctccaagct 41
              ||||||| ||||||||||||||||
Sbjct: 203928 gctcctcatcttcttctccaagct 203951
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>gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21-12I6 complete
             sequence
          Length = 193449

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    gctcctcttcttcttctccaagct 41
             ||||||| ||||||||||||||||
Sbjct: 44248 gctcctcatcttcttctccaagct 44271
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>gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome 5, complete sequence
          Length = 212792

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tccccgcacctgccggcggc 192
             ||||||||||||||||||||
Sbjct: 47508 tccccgcacctgccggcggc 47489
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>ref|NM_023132.2| Mus musculus renin binding protein (Renbp), mRNA
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gctcctcttcttcttctccaagct 41
           ||||||| ||||||||||||||||
Sbjct: 703 gctcctcatcttcttctccaagct 680
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>gb|BC034846.1| Mus musculus renin binding protein, mRNA (cDNA clone IMAGE:3373966),
            with apparent retained intron
          Length = 2140

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 18   gctcctcttcttcttctccaagct 41
            ||||||| ||||||||||||||||
Sbjct: 1419 gctcctcatcttcttctccaagct 1396
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>gb|BC035455.1| Mus musculus renin binding protein, mRNA (cDNA clone IMAGE:4457481)
          Length = 1326

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gctcctcttcttcttctccaagct 41
           ||||||| ||||||||||||||||
Sbjct: 629 gctcctcatcttcttctccaagct 606
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>ref|XM_810033.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053508919.70) partial mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 gtctccacctctcccatgac 144
           ||||||||||||||||||||
Sbjct: 242 gtctccacctctcccatgac 223
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>ref|XM_811193.1| Trypanosoma cruzi strain CL Brener protein kinase
           (Tc00.1047053506513.50) partial mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 gtctccacctctcccatgac 144
           ||||||||||||||||||||
Sbjct: 242 gtctccacctctcccatgac 223
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>ref|XM_547897.2| PREDICTED: Canis familiaris similar to transcriptional regulating
            factor 1 (LOC490775), mRNA
          Length = 3444

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 166  cgccgcctccccgcacctgccggc 189
            ||||||||||||||||| ||||||
Sbjct: 3384 cgccgcctccccgcacccgccggc 3407
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>gb|BC014821.1| Mus musculus renin binding protein, mRNA (cDNA clone MGC:25952
           IMAGE:4238244), complete cds
          Length = 1326

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gctcctcttcttcttctccaagct 41
           ||||||| ||||||||||||||||
Sbjct: 629 gctcctcatcttcttctccaagct 606
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>gb|AC144726.6| Medicago truncatula clone mth2-7k13, complete sequence
          Length = 138586

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aaggctcctcttcttcttct 34
             ||||||||||||||||||||
Sbjct: 81818 aaggctcctcttcttcttct 81837
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>gb|BC004830.1| Mus musculus mRNA similar to renin-binding protein (cDNA clone
            IMAGE:2647872)
          Length = 1413

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 18   gctcctcttcttcttctccaagct 41
            ||||||| ||||||||||||||||
Sbjct: 1223 gctcctcatcttcttctccaagct 1200
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     cctcttcttcttctccaagc 40
              ||||||||||||||||||||
Sbjct: 958497 cctcttcttcttctccaagc 958516
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>gb|AF520061.1| Candida glabrata SOK1p (SOK1) gene, partial cds; HHF2p (HHF2) and
            HHT2p (HHT2) genes, complete cds; and IPP1p (IPP1) gene,
            partial cds
          Length = 7456

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   cctcttcttcttctccaagc 40
            ||||||||||||||||||||
Sbjct: 1788 cctcttcttcttctccaagc 1807
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      aaaggctcctcttcttcttc 33
               ||||||||||||||||||||
Sbjct: 3011523 aaaggctcctcttcttcttc 3011542
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 90      ccgcgccccgcccatggcttgacc 113
               ||||||||||| ||||||||||||
Sbjct: 3896566 ccgcgccccgctcatggcttgacc 3896589
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>dbj|AK137429.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:9630056F23 product:Hypothetical
           ankyrin repeat profile/ankyrin-repeat/ankyrin repeat
           region circular profile/yeast DNA-binding domain
           containing protein, full insert sequence
          Length = 3901

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 tccccgcacctgccggcggc 192
           ||||||||||||||||||||
Sbjct: 508 tccccgcacctgccggcggc 489
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>dbj|AK146652.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:I920038J11
           product:N-acylglucosamine 2-epimerase (EC 5.1.3.8)
           (GlcNAc 2-epimerase) (N-acetyl-D-glucosamine
           2-epimerase) (Renin-binding protein) (RNBP), full insert
           sequence
          Length = 1381

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gctcctcttcttcttctccaagct 41
           ||||||| ||||||||||||||||
Sbjct: 700 gctcctcatcttcttctccaagct 677
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>dbj|AK167648.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530026N01
           product:renin binding protein, full insert sequence
          Length = 1286

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gctcctcttcttcttctccaagct 41
           ||||||| ||||||||||||||||
Sbjct: 606 gctcctcatcttcttctccaagct 583
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>dbj|AK165608.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched
           library, clone:G430056I22 product:pleckstrin homology
           domain containing, family C (with FERM domain) member 1,
           full insert sequence
          Length = 2252

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 cccttccgctcctcccgccg 291
           ||||||||||||||||||||
Sbjct: 109 cccttccgctcctcccgccg 90
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>dbj|AK033423.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030022F22 product:hypothetical Ankyrin
           repeat profile/Ankyrin-repeat/Ankyrin repeat region
           circular profile/Yeast DNA-binding domain containing
           protein, full insert sequence
          Length = 3781

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 tccccgcacctgccggcggc 192
           ||||||||||||||||||||
Sbjct: 437 tccccgcacctgccggcggc 418
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>dbj|AK014347.1| Mus musculus 17 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3300001H05 product:renin binding protein,
           full insert sequence
          Length = 1335

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gctcctcttcttcttctccaagct 41
           ||||||| ||||||||||||||||
Sbjct: 655 gctcctcatcttcttctccaagct 632
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 178     gcacctgccggcggcggcgtcgca 201
               ||||||||||| ||||||||||||
Sbjct: 4265707 gcacctgccggtggcggcgtcgca 4265684



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      ctcctcttcttcttctccaa 38
               ||||||||||||||||||||
Sbjct: 3177855 ctcctcttcttcttctccaa 3177836
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 120     tagttgtctccacctctcccatga 143
               ||||| ||||||||||||||||||
Sbjct: 8812505 tagttctctccacctctcccatga 8812528
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>emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB9ZD04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1684

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   aaggctcctcttcttcttct 34
            ||||||||||||||||||||
Sbjct: 1486 aaggctcctcttcttcttct 1467
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>gb|AY183138.1| Mus musculus renin-binding protein (Renbp) mRNA, complete cds;
           alternatively spliced
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 18  gctcctcttcttcttctccaagct 41
           ||||||| ||||||||||||||||
Sbjct: 703 gctcctcatcttcttctccaagct 680
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>ref|XM_223228.1| PREDICTED: Rattus norvegicus hypothetical LOC289501 (predicted)
           (LOC289501), mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 tccccgcacctgccggcggc 192
           ||||||||||||||||||||
Sbjct: 343 tccccgcacctgccggcggc 324
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>dbj|AK216097.1| Mus musculus cDNA, clone:Y2G0137D03, strand:minus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000033762, based on BLAT search
          Length = 359

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 18 gctcctcttcttcttctccaagct 41
          ||||||| ||||||||||||||||
Sbjct: 60 gctcctcatcttcttctccaagct 37
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>dbj|AK215192.1| Mus musculus cDNA, clone:Y2G0134E09, strand:minus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000033762, based on BLAT search
          Length = 385

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 18 gctcctcttcttcttctccaagct 41
          ||||||| ||||||||||||||||
Sbjct: 86 gctcctcatcttcttctccaagct 63
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>dbj|AK205945.1| Mus musculus cDNA, clone:Y2G0103E13, strand:minus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000033762, based on BLAT search
          Length = 398

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 18 gctcctcttcttcttctccaagct 41
          ||||||| ||||||||||||||||
Sbjct: 98 gctcctcatcttcttctccaagct 75
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>dbj|AK200509.1| Mus musculus cDNA, clone:Y1G0134M13, strand:minus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000033762, based on BLAT search
          Length = 421

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 18 gctcctcttcttcttctccaagct 41
          ||||||| ||||||||||||||||
Sbjct: 90 gctcctcatcttcttctccaagct 67
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>dbj|AK194143.1| Mus musculus cDNA, clone:Y1G0114H01, strand:minus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000033762, based on BLAT search
          Length = 387

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 18 gctcctcttcttcttctccaagct 41
          ||||||| ||||||||||||||||
Sbjct: 88 gctcctcatcttcttctccaagct 65
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>dbj|AK182381.1| Mus musculus cDNA, clone:Y0G0121M08, strand:plus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000033762, based on BLAT search
          Length = 397

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 18 gctcctcttcttcttctccaagct 41
          ||||||| ||||||||||||||||
Sbjct: 97 gctcctcatcttcttctccaagct 74
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    cgctcatcgacgccgcctcc 175
              ||||||||||||||||||||
Sbjct: 428548 cgctcatcgacgccgcctcc 428567
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 178     gcacctgccggcggcggcgtcgca 201
               ||||||||||| ||||||||||||
Sbjct: 4274401 gcacctgccggtggcggcgtcgca 4274378



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      ctcctcttcttcttctccaa 38
               ||||||||||||||||||||
Sbjct: 3186560 ctcctcttcttcttctccaa 3186541
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>emb|AM167922.1| Zea mays mRNA for sialyltransferase like protein (stv3 gene)
          Length = 1902

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 cgcacctgccggcggcggcg 196
           ||||||||||||||||||||
Sbjct: 76  cgcacctgccggcggcggcg 95
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>dbj|AP004898.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047b,
             complete sequence
          Length = 69411

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ctcctcttcttcttctccaa 38
             ||||||||||||||||||||
Sbjct: 45097 ctcctcttcttcttctccaa 45078
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>emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on chromosome X, complete
             sequence
          Length = 225712

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    gctcctcttcttcttctccaagct 41
             ||||||| ||||||||||||||||
Sbjct: 47519 gctcctcatcttcttctccaagct 47542


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,519,366
Number of Sequences: 3902068
Number of extensions: 3519366
Number of successful extensions: 106261
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105646
Number of HSP's gapped (non-prelim): 615
length of query: 346
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 324
effective length of database: 17,147,199,772
effective search space: 5555692726128
effective search space used: 5555692726128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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