ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl29g09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 628 bits (317), Expect = e-177 Identities = 441/481 (91%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 355 atctggaactggcagtcacgcacatgtgtagctgtgctgactggacataaccactatgtc 414 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 |||||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 415 atgtgcgcatcattccatcccaaggaggacctggttgtgtcagcatcactggatcagact 474 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 475 gtccgtgtttgggatattggtgctttgaggaagaagacggtgtcacctgcagatgacatc 534 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || ||||| ||||| |||||| Sbjct: 535 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgatgcagttgtaaaatat 594 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 595 gtgttggaagggcatgaccgtggggtgaactgggcatcatttcaccccacattgccactc 654 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggct 363 |||||||| |||||||||||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 655 attgtttccggggcagatgaccgacaagtgaagctatggagaatgaatgacacgaaggct 714 Query: 364 tgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttccatgcg 423 |||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||| Sbjct: 715 tgggaagttgatactttgcggggacacatgaataatgtgtcatgcgtgatgttccatgct 774 Query: 424 aagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggatgccaca 482 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 775 aagcaagacatcattgtgtccaactcagaggacaaaagcattcgcatctgggatgccaca 834 Query: 483 a 483 | Sbjct: 835 a 835
>dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G08, full insert sequence Length = 4221 Score = 628 bits (317), Expect = e-177 Identities = 441/481 (91%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 499 atctggaactggcagtcacgcacatgtgtagctgtgctgactggacataaccactatgtc 558 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 |||||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 559 atgtgcgcatcattccatcccaaggaggacctggttgtgtcagcatcactggatcagact 618 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 619 gtccgtgtttgggatattggtgctttgaggaagaagacggtgtcacctgcagatgacatc 678 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || ||||| ||||| |||||| Sbjct: 679 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgatgcagttgtaaaatat 738 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 739 gtgttggaagggcatgaccgtggggtgaactgggcatcatttcaccccacattgccactc 798 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggct 363 |||||||| |||||||||||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 799 attgtttccggggcagatgaccgacaagtgaagctatggagaatgaatgacacgaaggct 858 Query: 364 tgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttccatgcg 423 |||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||| Sbjct: 859 tgggaagttgatactttgcggggacacatgaataatgtgtcatgcgtgatgttccatgct 918 Query: 424 aagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggatgccaca 482 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 919 aagcaagacatcattgtgtccaactcagaggacaaaagcattcgcatctgggatgccaca 978 Query: 483 a 483 | Sbjct: 979 a 979
>dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J01, full insert sequence Length = 2535 Score = 603 bits (304), Expect = e-169 Identities = 434/476 (91%), Gaps = 1/476 (0%) Strand = Plus / Minus Query: 7 tggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtcatg 66 ||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 926 tggaactggcagtcacgcacatgtgtggctgtgctgactggacataaccactatgtcatg 867 Query: 67 tgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactgtt 126 ||||| || ||||| ||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 866 tgcgcatcattccatcccaaggaggatctggttgtgtccgcatcactggatcagactgtc 807 Query: 127 cgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatcatg 186 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct: 806 cgtgtatgggatattggtgctttgaggaagaagacggtgtcacctgcggatgacatcctg 747 Query: 187 cgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtc 246 || ||||| ||||||||||||||||||||||| || || ||||| ||||| |||||||| Sbjct: 746 cgcctcacccagatgaacactgatctgtttggaggtgttgatgcagttgtaaaatatgtg 687 Query: 247 ttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcatt 306 |||||||| ||||||||||| || |||||||| || || || ||||||||||| |||||| Sbjct: 686 ttggaagggcatgaccgtggggtgaactgggcgtcatttcaccccacattgccgctcatt 627 Query: 307 gtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgg 366 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 626 gtttctggggcagatgaccggcaagtgaagctatggagaatgaatgacaccaaggcttgg 567 Query: 367 gaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttccatgcgaag 426 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 566 gaagttgatactttgcgggggcacatgaataatgtgtcctgcgtgatgttccatgcaaag 507 Query: 427 caagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggatgccac 481 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 506 caagacatcattgtgtccaactcagaggacaaaagcattcgtgtctgggatgccac 451
>dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I16, full insert sequence Length = 4284 Score = 587 bits (296), Expect = e-164 Identities = 433/476 (90%), Gaps = 2/476 (0%) Strand = Plus / Plus Query: 7 tggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtcatg 66 ||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 586 tggaactggcagtcacgcacatgtgtggctgtgctgactggacataaccactatgtcatg 645 Query: 67 tgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactgtt 126 ||||| || ||||| ||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 646 tgcgcatcattccatcccaaggaggatctggttgtgtccgcatcactggatcagactgtc 705 Query: 127 cgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatcatg 186 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct: 706 cgtgtatgggatattggtgctttgaggaagaagacggtgtcacctgcggatgacatcctg 765 Query: 187 cgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtc 246 || ||||| ||||||||||||||||||||||| || || ||||| ||||| |||||||| Sbjct: 766 cgcctcacccagatgaacactgatctgtttggaggtgttgatgcagttgtaaaatatgtg 825 Query: 247 ttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcatt 306 |||||||| ||||||||||| || |||||||| || || || ||||||||||| |||||| Sbjct: 826 ttggaagggcatgaccgtggggtgaactgggcgtcatttcaccccacattgccgctcatt 885 Query: 307 gtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgg 366 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 886 gtttctggggcagatgaccggcaagtgaagctatggagaatgaatgacaccaaggcttgg 945 Query: 367 gaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttccatgcgaag 426 |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 946 gaagttgatacttt-cgggggcacatgaataatgtgtcctgcgtgatgttccatgcaaag 1004 Query: 427 caagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggatgccac 481 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 1005 caagacatcattgtgtccaactcagaggacaaaagcattcgtgtctgggatgccac 1060
>ref|XM_469514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 581 bits (293), Expect = e-163 Identities = 435/481 (90%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || |||||||||||||||||||||||||| || |||||| Sbjct: 355 atctggaactggcagtcacgcacatgtgtggctgtgctcactgggcataaccattatgtc 414 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 ||||| || || |||||||| |||||||| |||||||| |||||||| || ||||||||| Sbjct: 415 atgtgtgcatctttccaccctaaggaggatctggttgtttcagcatctcttgatcagact 474 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || ||||| ||||||||| |||| ||||||||||| | ||||||||||| ||||||||| Sbjct: 475 gtccgtgtctgggatattagtgctttgaggaagaagtcagtgtcacctgcggatgacatc 534 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || || |||||||| |||||| Sbjct: 535 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgacgcggttgtaaaatat 594 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 595 gtgttggaagggcatgatcgtggggtcaactgggcttcatttcatcccacgttgccacta 654 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggct 363 |||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||| Sbjct: 655 attgtttctggggcagatgatcggcaagtgaagatatggagaatgaatgacaccaaggct 714 Query: 364 tgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttccatgcg 423 |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 715 tgggaagttgatactttgcgggggcacatgaataacgtgtcctgtgtgatgttccatgca 774 Query: 424 aagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggatgccaca 482 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 775 aagcaagacatcatagtgtccaactcagaggacaaaagcattcgcatctgggatgccaca 834 Query: 483 a 483 | Sbjct: 835 a 835
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 438 bits (221), Expect = e-120 Identities = 317/349 (90%) Strand = Plus / Minus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 28428601 atctggaactggcagtcacgcacatgtgtagctgtgctgactggacataaccactatgtc 28428542 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 |||||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 28428541 atgtgcgcatcattccatcccaaggaggacctggttgtgtcagcatcactggatcagact 28428482 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 28428481 gtccgtgtttgggatattggtgctttgaggaagaagacggtgtcacctgcagatgacatc 28428422 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || ||||| ||||| |||||| Sbjct: 28428421 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgatgcagttgtaaaatat 28428362 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 28428361 gtgttggaagggcatgaccgtggggtgaactgggcatcatttcaccccacattgccactc 28428302 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 28428301 attgtttccggggcagatgaccgacaagtgaagctatggagaatgaatg 28428253 Score = 375 bits (189), Expect = e-101 Identities = 309/349 (88%) Strand = Plus / Minus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || |||||||||||||||||||||||||| || |||||| Sbjct: 28440320 atctggaactggcagtcacgcacatgtgtggctgtgctcactgggcataaccattatgtc 28440261 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 ||||| || || |||||||| |||||||| |||||||| |||||||| || ||||||||| Sbjct: 28440260 atgtgtgcatctttccaccctaaggaggatctggttgtttcagcatctcttgatcagact 28440201 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || ||||| ||||||||| |||| ||||||||||| | ||||||||||| ||||||||| Sbjct: 28440200 gtccgtgtctgggatattagtgctttgaggaagaagtcagtgtcacctgcggatgacatc 28440141 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || || |||||||| |||||| Sbjct: 28440140 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgacgcggttgtaaaatat 28440081 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 28440080 gtgttggaagggcatgatcgtggggtcaactgggcttcatttcatcccacgttgccacta 28440021 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||||||||||||||| |||||||||||| | ||||||||||||| Sbjct: 28440020 attgtttctggggcagatgatcggcaagtgaagatatggagaatgaatg 28439972 Score = 210 bits (106), Expect = 3e-51 Identities = 125/130 (96%), Gaps = 1/130 (0%) Strand = Plus / Minus Query: 355 accaaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatg 414 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 28439229 accaaggcttgggaagttgatactttgcgggggcacatgaataacgtgtcctgtgtgatg 28439170 Query: 415 ttccatgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgg 473 |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 28439169 ttccatgcaaagcaagacatcatagtgtccaactcagaggacaaaagcattcgcatctgg 28439110 Query: 474 gatgccacaa 483 |||||||||| Sbjct: 28439109 gatgccacaa 28439100 Score = 196 bits (99), Expect = 5e-47 Identities = 121/127 (95%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 358 aaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttc 417 |||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||| Sbjct: 28427834 aaggcttgggaagttgatactttgcggggacacatgaataatgtgtcatgcgtgatgttc 28427775 Query: 418 catgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggat 476 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28427774 catgctaagcaagacatcattgtgtccaactcagaggacaaaagcattcgcatctgggat 28427715 Query: 477 gccacaa 483 ||||||| Sbjct: 28427714 gccacaa 28427708
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 438 bits (221), Expect = e-120 Identities = 317/349 (90%) Strand = Plus / Minus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 28519925 atctggaactggcagtcacgcacatgtgtagctgtgctgactggacataaccactatgtc 28519866 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 |||||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 28519865 atgtgcgcatcattccatcccaaggaggacctggttgtgtcagcatcactggatcagact 28519806 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 28519805 gtccgtgtttgggatattggtgctttgaggaagaagacggtgtcacctgcagatgacatc 28519746 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || ||||| ||||| |||||| Sbjct: 28519745 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgatgcagttgtaaaatat 28519686 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 28519685 gtgttggaagggcatgaccgtggggtgaactgggcatcatttcaccccacattgccactc 28519626 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 28519625 attgtttccggggcagatgaccgacaagtgaagctatggagaatgaatg 28519577 Score = 375 bits (189), Expect = e-101 Identities = 309/349 (88%) Strand = Plus / Minus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || |||||||||||||||||||||||||| || |||||| Sbjct: 28531644 atctggaactggcagtcacgcacatgtgtggctgtgctcactgggcataaccattatgtc 28531585 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 ||||| || || |||||||| |||||||| |||||||| |||||||| || ||||||||| Sbjct: 28531584 atgtgtgcatctttccaccctaaggaggatctggttgtttcagcatctcttgatcagact 28531525 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || ||||| ||||||||| |||| ||||||||||| | ||||||||||| ||||||||| Sbjct: 28531524 gtccgtgtctgggatattagtgctttgaggaagaagtcagtgtcacctgcggatgacatc 28531465 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || || |||||||| |||||| Sbjct: 28531464 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgacgcggttgtaaaatat 28531405 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 28531404 gtgttggaagggcatgatcgtggggtcaactgggcttcatttcatcccacgttgccacta 28531345 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||||||||||||||| |||||||||||| | ||||||||||||| Sbjct: 28531344 attgtttctggggcagatgatcggcaagtgaagatatggagaatgaatg 28531296 Score = 210 bits (106), Expect = 3e-51 Identities = 125/130 (96%), Gaps = 1/130 (0%) Strand = Plus / Minus Query: 355 accaaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatg 414 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 28530553 accaaggcttgggaagttgatactttgcgggggcacatgaataacgtgtcctgtgtgatg 28530494 Query: 415 ttccatgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgg 473 |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 28530493 ttccatgcaaagcaagacatcatagtgtccaactcagaggacaaaagcattcgcatctgg 28530434 Query: 474 gatgccacaa 483 |||||||||| Sbjct: 28530433 gatgccacaa 28530424 Score = 196 bits (99), Expect = 5e-47 Identities = 121/127 (95%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 358 aaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttc 417 |||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||| Sbjct: 28519158 aaggcttgggaagttgatactttgcggggacacatgaataatgtgtcatgcgtgatgttc 28519099 Query: 418 catgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggat 476 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28519098 catgctaagcaagacatcattgtgtccaactcagaggacaaaagcattcgcatctgggat 28519039 Query: 477 gccacaa 483 ||||||| Sbjct: 28519038 gccacaa 28519032
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 438 bits (221), Expect = e-120 Identities = 317/349 (90%) Strand = Plus / Minus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || ||||| |||||||| ||||| ||||| ||||||||| Sbjct: 22731 atctggaactggcagtcacgcacatgtgtagctgtgctgactggacataaccactatgtc 22672 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 |||||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 22671 atgtgcgcatcattccatcccaaggaggacctggttgtgtcagcatcactggatcagact 22612 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 22611 gtccgtgtttgggatattggtgctttgaggaagaagacggtgtcacctgcagatgacatc 22552 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || ||||| ||||| |||||| Sbjct: 22551 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgatgcagttgtaaaatat 22492 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||||||||| || ||||||||||| || || ||||||||||||||| Sbjct: 22491 gtgttggaagggcatgaccgtggggtgaactgggcatcatttcaccccacattgccactc 22432 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 22431 attgtttccggggcagatgaccgacaagtgaagctatggagaatgaatg 22383 Score = 375 bits (189), Expect = e-101 Identities = 309/349 (88%) Strand = Plus / Minus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||||||||||||||| || |||||||||||||||||||||||||| || |||||| Sbjct: 34450 atctggaactggcagtcacgcacatgtgtggctgtgctcactgggcataaccattatgtc 34391 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 ||||| || || |||||||| |||||||| |||||||| |||||||| || ||||||||| Sbjct: 34390 atgtgtgcatctttccaccctaaggaggatctggttgtttcagcatctcttgatcagact 34331 Query: 124 gttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatc 183 || ||||| ||||||||| |||| ||||||||||| | ||||||||||| ||||||||| Sbjct: 34330 gtccgtgtctgggatattagtgctttgaggaagaagtcagtgtcacctgcggatgacatc 34271 Query: 184 atgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatat 243 |||||||||| ||||||||||| ||||||||||| || || || |||||||| |||||| Sbjct: 34270 ctgcgtctcacccagatgaacacagatctgtttggaggtgttgacgcggttgtaaaatat 34211 Query: 244 gtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactc 303 || |||||||| ||||| ||||| ||||||||||| || || |||||||| |||||||| Sbjct: 34210 gtgttggaagggcatgatcgtggggtcaactgggcttcatttcatcccacgttgccacta 34151 Query: 304 attgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||||||||||||||| |||||||||||| | ||||||||||||| Sbjct: 34150 attgtttctggggcagatgatcggcaagtgaagatatggagaatgaatg 34102 Score = 210 bits (106), Expect = 3e-51 Identities = 125/130 (96%), Gaps = 1/130 (0%) Strand = Plus / Minus Query: 355 accaaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatg 414 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 33359 accaaggcttgggaagttgatactttgcgggggcacatgaataacgtgtcctgtgtgatg 33300 Query: 415 ttccatgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgg 473 |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 33299 ttccatgcaaagcaagacatcatagtgtccaactcagaggacaaaagcattcgcatctgg 33240 Query: 474 gatgccacaa 483 |||||||||| Sbjct: 33239 gatgccacaa 33230 Score = 196 bits (99), Expect = 5e-47 Identities = 121/127 (95%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 358 aaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttc 417 |||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||| Sbjct: 21964 aaggcttgggaagttgatactttgcggggacacatgaataatgtgtcatgcgtgatgttc 21905 Query: 418 catgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgggat 476 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21904 catgctaagcaagacatcattgtgtccaactcagaggacaaaagcattcgcatctgggat 21845 Query: 477 gccacaa 483 ||||||| Sbjct: 21844 gccacaa 21838
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 408 bits (206), Expect = e-111 Identities = 311/346 (89%) Strand = Plus / Minus Query: 7 tggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtcatg 66 ||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 2077894 tggaactggcagtcacgcacatgtgtggctgtgctgactggacataaccactatgtcatg 2077835 Query: 67 tgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactgtt 126 ||||| || ||||| ||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 2077834 tgcgcatcattccatcccaaggaggatctggttgtgtccgcatcactggatcagactgtc 2077775 Query: 127 cgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatcatg 186 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct: 2077774 cgtgtatgggatattggtgctttgaggaagaagacggtgtcacctgcggatgacatcctg 2077715 Query: 187 cgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtc 246 || ||||| ||||||||||||||||||||||| || || ||||| ||||| |||||||| Sbjct: 2077714 cgcctcacccagatgaacactgatctgtttggaggtgttgatgcagttgtaaaatatgtg 2077655 Query: 247 ttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcatt 306 |||||||| ||||||||||| || |||||||| || || || ||||||||||| |||||| Sbjct: 2077654 ttggaagggcatgaccgtggggtgaactgggcgtcatttcaccccacattgccgctcatt 2077595 Query: 307 gtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2077594 gtttctggggcagatgaccggcaagtgaagctatggagaatgaatg 2077549 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 355 accaaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatg 414 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 2077144 accaaggcttgggaagttgatactttgcgggggcacatgaataatgtgtcctgcgtgatg 2077085 Query: 415 ttccatgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgg 473 |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 2077084 ttccatgcaaagcaagacatcattgtgtccaactcagaggacaaaagcattcgtgtctgg 2077025 Query: 474 gatgccac 481 |||||||| Sbjct: 2077024 gatgccac 2077017
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 408 bits (206), Expect = e-111 Identities = 311/346 (89%) Strand = Plus / Minus Query: 7 tggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtcatg 66 ||||||||||||||||| || |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 3311 tggaactggcagtcacgcacatgtgtggctgtgctgactggacataaccactatgtcatg 3252 Query: 67 tgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactgtt 126 ||||| || ||||| ||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 3251 tgcgcatcattccatcccaaggaggatctggttgtgtccgcatcactggatcagactgtc 3192 Query: 127 cgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatcatg 186 ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct: 3191 cgtgtatgggatattggtgctttgaggaagaagacggtgtcacctgcggatgacatcctg 3132 Query: 187 cgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtc 246 || ||||| ||||||||||||||||||||||| || || ||||| ||||| |||||||| Sbjct: 3131 cgcctcacccagatgaacactgatctgtttggaggtgttgatgcagttgtaaaatatgtg 3072 Query: 247 ttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcatt 306 |||||||| ||||||||||| || |||||||| || || || ||||||||||| |||||| Sbjct: 3071 ttggaagggcatgaccgtggggtgaactgggcgtcatttcaccccacattgccgctcatt 3012 Query: 307 gtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 3011 gtttctggggcagatgaccggcaagtgaagctatggagaatgaatg 2966 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 355 accaaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatg 414 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 2561 accaaggcttgggaagttgatactttgcgggggcacatgaataatgtgtcctgcgtgatg 2502 Query: 415 ttccatgcgaagcaagacatcattgtgtccaactcagaggac-aaagcattcgcatctgg 473 |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 2501 ttccatgcaaagcaagacatcattgtgtccaactcagaggacaaaagcattcgtgtctgg 2442 Query: 474 gatgccac 481 |||||||| Sbjct: 2441 gatgccac 2434
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 301 bits (152), Expect = 1e-78 Identities = 299/348 (85%) Strand = Plus / Minus Query: 5 tctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtca 64 |||||||||||||||| || || || ||||| ||||| || ||||| ||||||||||||| Sbjct: 4487 tctggaactggcagtcgcgcacctgcgtggcggtgctgacggggcacaatcactatgtca 4428 Query: 65 tgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactg 124 |||| || |||||||| ||||||||||||||||| |||||||| || || |||||||| | Sbjct: 4427 tgtgtgcttccttccatcccaaggaggacctggtcgtgtcagcgtctctggatcagaccg 4368 Query: 125 ttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatca 184 | || || ||||||||||| || || ||||||||| || ||| || || |||||||||| Sbjct: 4367 tccgggtgtgggatattggcgctctcaggaagaagtcgtcgtccccagccgatgacatca 4308 Query: 185 tgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatg 244 |||||||||| ||||||||||||||||||||||| ||| ||||||| || || || |||| Sbjct: 4307 tgcgtctcacccagatgaacactgatctgtttggaggcatcgatgctgtggtcaagtatg 4248 Query: 245 tcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactca 304 ||||||| || |||||||| || ||||||||||| || || ||||| || ||||||| | Sbjct: 4247 tcttggagggtcatgaccgcggggtcaactgggcctcgtttcatcctaccctgccactta 4188 Query: 305 ttgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 ||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 4187 ttgtttctggggcagatgaccggcaagtgaaactctggaggatgaatg 4140 Score = 89.7 bits (45), Expect = 8e-15 Identities = 112/133 (84%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 352 gataccaaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtg 411 ||||| ||||| ||||| ||||||||| | || || |||||||| ||||| |||||||| Sbjct: 3902 gatacaaaggcatgggaggttgatactcttagaggtcacatgaacaatgtctcctgtgta 3843 Query: 412 atgttccatgcgaagcaagacatcattgtgtccaactcagaggacaa-agcattcgcatc 470 ||||||| |||||||| |||||||| || ||||||||||| ||||| || || || || Sbjct: 3842 ttgttccacgcgaagcaggacatcatcgtatccaactcagaagacaagagtatccgtgtc 3783 Query: 471 tgggatgccacaa 483 ||||||||||||| Sbjct: 3782 tgggatgccacaa 3770
>ref|NM_104882.1| Arabidopsis thaliana protein transporter/ transporter AT1G62020 mRNA, complete cds Length = 3947 Score = 176 bits (89), Expect = 4e-41 Identities = 359/449 (79%) Strand = Plus / Plus Query: 1 cgtatctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactat 60 ||||| ||||||||||| ||||| |||||||| |||| | ||||| || ||||| ||| Sbjct: 352 cgtatatggaactggcaatcacggacttgtgtttctgtattgactggtcacaatcattat 411 Query: 61 gtcatgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcag 120 || ||||| || || ||||| || || || ||||| || || ||||| ||| |||||||| Sbjct: 412 gttatgtgtgcttctttccatccgaaagaagacctcgtcgtatcagcttcgttagatcag 471 Query: 121 actgttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgac 180 |||||||||||||||||||||||||| || ||||||||||| || || ||||| ||||| Sbjct: 472 actgttcgtgtttgggatattggtgctcttaggaagaagactgtatctcctgctgatgat 531 Query: 181 atcatgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaa 240 |||||| | | ||||||||||| | |||||| ||||| || || ||||| |||| || Sbjct: 532 atcatgaggttgactcagatgaatagtgatctttttggtggagttgatgccattgtcaag 591 Query: 241 tatgtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgcca 300 || || | ||||| ||||| | ||||| |||||||| | || |||||||| |||| Sbjct: 592 tacgttcttgaaggtcatgatagaggtgtaaactgggctgcttttcatcccaccctgcct 651 Query: 301 ctcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaag 360 || ||||| || || ||||||||||| ||||| ||||||||| | |||||||| || || Sbjct: 652 cttattgtctcgggtgcagatgaccgccaagtaaagctgtggcgtatgaatgaaactaaa 711 Query: 361 gcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttccat 420 |||||||| || ||||| ||| | || || |||||||| || || | ||| ||||||||| Sbjct: 712 gcttgggaggtggatacattgcgaggccatatgaataacgtttcatctgttatgttccat 771 Query: 421 gcgaagcaagacatcattgtgtccaactc 449 || || || ||||| ||||| || ||||| Sbjct: 772 gcaaaacaggacataattgtatcaaactc 800
>gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8K4 sequence, complete sequence Length = 115641 Score = 151 bits (76), Expect = 2e-33 Identities = 283/352 (80%) Strand = Plus / Plus Query: 1 cgtatctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactat 60 ||||| ||||||||||| ||||| |||||||| |||| | ||||| || ||||| ||| Sbjct: 97210 cgtatatggaactggcaatcacggacttgtgtttctgtattgactggtcacaatcattat 97269 Query: 61 gtcatgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcag 120 || ||||| || || ||||| || || || ||||| || || ||||| ||| |||||||| Sbjct: 97270 gttatgtgtgcttctttccatccgaaagaagacctcgtcgtatcagcttcgttagatcag 97329 Query: 121 actgttcgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgac 180 |||||||||||||||||||||||||| || ||||||||||| || || ||||| ||||| Sbjct: 97330 actgttcgtgtttgggatattggtgctcttaggaagaagactgtatctcctgctgatgat 97389 Query: 181 atcatgcgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaa 240 |||||| | | ||||||||||| | |||||| ||||| || || ||||| |||| || Sbjct: 97390 atcatgaggttgactcagatgaatagtgatctttttggtggagttgatgccattgtcaag 97449 Query: 241 tatgtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgcca 300 || || | ||||| ||||| | ||||| |||||||| | || |||||||| |||| Sbjct: 97450 tacgttcttgaaggtcatgatagaggtgtaaactgggctgcttttcatcccaccctgcct 97509 Query: 301 ctcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 || ||||| || || ||||||||||| ||||| ||||||||| | ||||||| Sbjct: 97510 cttattgtctcgggtgcagatgaccgccaagtaaagctgtggcgtatgaatg 97561
>ref|NM_127711.2| Arabidopsis thaliana protein transporter/ transporter AT2G21390 mRNA, complete cds Length = 4189 Score = 129 bits (65), Expect = 9e-27 Identities = 353/449 (78%) Strand = Plus / Plus Query: 7 tggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtcatg 66 |||||||||||||| | |||||| | | ||| | ||||| || ||||| ||||| ||| Sbjct: 590 tggaactggcagtctaggacttgtatttccgtgttgactggtcacaatcattatgttatg 649 Query: 67 tgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactgtt 126 || || || ||||| || ||||| || || ||||| |||||||| || ||||||||||| Sbjct: 650 tgtgcttctttccatccaaaggaagatcttgttgtatcagcatcactggatcagactgtc 709 Query: 127 cgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatcatg 186 ||||||||||| |||||||| || | ||||||| | | || ||||| |||||| ||||| Sbjct: 710 cgtgtttgggacattggtgctcttaagaagaagtcagcatctcctgctgatgacctcatg 769 Query: 187 cgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtc 246 || | | ||||||||| ||||||| ||||| || || || || | || || || ||| Sbjct: 770 cgatttagtcagatgaattctgatctttttggaggggttgacgctatagttaagtacgtc 829 Query: 247 ttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcatt 306 | ||||| ||||| | || ||||||||||| || || ||||||||| | || |||||| Sbjct: 830 cttgaaggtcatgatagaggagtcaactgggcttcttttcatcccacacttcctctcatt 889 Query: 307 gtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgg 366 || ||||| || |||||||| ||||| ||||||||| | |||||||| || || |||||| Sbjct: 890 gtctctggtgccgatgaccgccaagtaaagctgtggcgtatgaatgaaactaaagcttgg 949 Query: 367 gaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttccatgcgaag 426 || || ||||| ||| | || || |||||||| || || | || ||||||||||| || Sbjct: 950 gaggtggatacattgcgaggtcatatgaataacgtttcatccgttatgttccatgcaaaa 1009 Query: 427 caagacatcattgtgtccaactcagagga 455 || ||||| || ||||| ||||| ||||| Sbjct: 1010 caggacattatcgtgtcaaactctgagga 1038
>emb|AJ580822.1|LCO580822 Lotus corniculatus var. japonicus gene for coatomer alpha subunit-like protein Length = 11115 Score = 121 bits (61), Expect = 2e-24 Identities = 133/157 (84%) Strand = Plus / Plus Query: 196 cagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtcttggaaggc 255 ||||||||||| ||||| ||||| || || ||||||||||| || ||||| |||||||| Sbjct: 3501 cagatgaacacagatctttttggtggtgttgatgcggttgttaagtatgtattggaaggt 3560 Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 |||||||| |||||||||||||| | || ||||| ||| |||| |||||||| || || Sbjct: 3561 catgaccgaggtgtcaactgggctgcttttcatcctacactgcctctcattgtctcagga 3620 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatg 352 || |||||||| |||||||| || ||||||||||||| Sbjct: 3621 gctgatgaccgacaagtgaaactttggagaatgaatg 3657 Score = 99.6 bits (50), Expect = 8e-18 Identities = 111/130 (85%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 355 accaaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatg 414 |||||||| |||||||| ||||||||||| ||||||||||||||||| || ||||| ||| Sbjct: 4330 accaaggcatgggaagtggatactttgagagggcacatgaataatgtttcttgtgttatg 4389 Query: 415 ttccatgcgaagcaagacatcattgtgtccaactcagagga-caaagcattcgcatctgg 473 |||||||| || ||||| || |||||||| || || ||||| |||||||||| | ||| Sbjct: 4390 ttccatgccaaacaagatattattgtgtcaaattctgaggataaaagcattcgagtatgg 4449 Query: 474 gatgccacaa 483 ||||| |||| Sbjct: 4450 gatgcaacaa 4459 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 ||||||||||||||||||||||| ||| | |||| | |||||||| ||||| ||||| Sbjct: 3309 atctggaactggcagtcacgtacctgtatatctgttttgactgggcacaatcattatgtt 3368 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 ||||| || || ||||| || || ||||| | ||||||||||| || | ||||||||| Sbjct: 3369 atgtgtgcctcgttccatccaaaagaggatattgttgtgtcagcctccttggatcagact 3428 Query: 124 gttcgtgtttgggatattggt 144 ||||||||||||||||||||| Sbjct: 3429 gttcgtgtttgggatattggt 3449
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 107 bits (54), Expect = 3e-20 Identities = 273/346 (78%) Strand = Plus / Plus Query: 7 tggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtcatg 66 |||||||||||||| | |||||| | | ||| | ||||| || ||||| ||||| ||| Sbjct: 50229 tggaactggcagtctaggacttgtatttccgtgttgactggtcacaatcattatgttatg 50288 Query: 67 tgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactgtt 126 || || || ||||| || ||||| || || ||||| |||||||| || ||||||||||| Sbjct: 50289 tgtgcttctttccatccaaaggaagatcttgttgtatcagcatcactggatcagactgtc 50348 Query: 127 cgtgtttgggatattggtgccctgaggaagaagacggtgtcacctgcagatgacatcatg 186 ||||||||||| |||||||| || | ||||||| | | || ||||| |||||| ||||| Sbjct: 50349 cgtgtttgggacattggtgctcttaagaagaagtcagcatctcctgctgatgacctcatg 50408 Query: 187 cgtctcactcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtc 246 || | | ||||||||| ||||||| ||||| || || || || | || || || ||| Sbjct: 50409 cgatttagtcagatgaattctgatctttttggaggggttgacgctatagttaagtacgtc 50468 Query: 247 ttggaaggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcatt 306 | ||||| ||||| | || ||||||||||| || || ||||||||| | || |||||| Sbjct: 50469 cttgaaggtcatgatagaggagtcaactgggcttcttttcatcccacacttcctctcatt 50528 Query: 307 gtttctggggcagatgaccggcaagtgaagctgtggagaatgaatg 352 || ||||| || |||||||| ||||| ||||||||| | ||||||| Sbjct: 50529 gtctctggtgccgatgaccgccaagtaaagctgtggcgtatgaatg 50574
>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence Length = 121952 Score = 99.6 bits (50), Expect = 8e-18 Identities = 131/158 (82%) Strand = Plus / Plus Query: 195 tcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtcttggaagg 254 |||||||||||| ||||| ||||| || |||||||| ||||| || || || |||||||| Sbjct: 103378 tcagatgaacacggatctttttggtggtgtcgatgcagttgttaagtacgtgttggaagg 103437 Query: 255 ccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctgg 314 |||||||| |||||||||||||| | || ||||| ||| |||| || ||||| || || Sbjct: 103438 tcatgaccggggtgtcaactgggctgcttttcatcctacactgcctcttattgtctcagg 103497 Query: 315 ggcagatgaccggcaagtgaagctgtggagaatgaatg 352 || |||||||| |||||||| || ||||| ||||||| Sbjct: 103498 agctgatgaccgtcaagtgaaactttggaggatgaatg 103535 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 358 aaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttc 417 ||||| |||||||| ||||||||||| ||||||||||||||||| || ||||| |||||| Sbjct: 104178 aaggcatgggaagtggatactttgagagggcacatgaataatgtttcatgtgttatgttc 104237 Query: 418 catgcgaagcaagacatcattgtgtc 443 ||||| || || || ||||||||||| Sbjct: 104238 catgccaaacaggatatcattgtgtc 104263 Score = 89.7 bits (45), Expect = 8e-15 Identities = 117/141 (82%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||| |||||||||||||| ||| | |||| | |||||||| || || ||||| Sbjct: 103187 atctggaattggcagtcacgtacctgtatatctgttttaactgggcacaaccattatgtt 103246 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 ||||| || || ||||| || || ||||| | ||||||||||| || || ||||||||| Sbjct: 103247 atgtgtgcttcattccatccaaaagaggatattgttgtgtcagcctccctggatcagact 103306 Query: 124 gttcgtgtttgggatattggt 144 ||||||||||||||||||||| Sbjct: 103307 gttcgtgtttgggatattggt 103327
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 99.6 bits (50), Expect = 8e-18 Identities = 131/158 (82%) Strand = Plus / Plus Query: 195 tcagatgaacactgatctgtttgggggcgtcgatgcggttgtgaaatatgtcttggaagg 254 |||||||||||| ||||| ||||| || |||||||| ||||| || || || |||||||| Sbjct: 24879 tcagatgaacacggatctttttggtggtgtcgatgcagttgttaagtacgtgttggaagg 24938 Query: 255 ccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctgg 314 |||||||| |||||||||||||| | || ||||| ||| |||| || ||||| || || Sbjct: 24939 tcatgaccggggtgtcaactgggctgcttttcatcctacactgcctcttattgtctcagg 24998 Query: 315 ggcagatgaccggcaagtgaagctgtggagaatgaatg 352 || |||||||| |||||||| || ||||| ||||||| Sbjct: 24999 agctgatgaccgtcaagtgaaactttggaggatgaatg 25036 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 358 aaggcttgggaagttgatactttgagggggcacatgaataatgtgtcctgtgtgatgttc 417 ||||| |||||||| ||||||||||| ||||||||||||||||| || ||||| |||||| Sbjct: 25679 aaggcatgggaagtggatactttgagagggcacatgaataatgtttcatgtgttatgttc 25738 Query: 418 catgcgaagcaagacatcattgtgtc 443 ||||| || || || ||||||||||| Sbjct: 25739 catgccaaacaggatatcattgtgtc 25764 Score = 89.7 bits (45), Expect = 8e-15 Identities = 117/141 (82%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacgtacttgtgtggctgtgctcactgggcataatcactatgtc 63 |||||||| |||||||||||||| ||| | |||| | |||||||| || || ||||| Sbjct: 24688 atctggaattggcagtcacgtacctgtatatctgttttaactgggcacaaccattatgtt 24747 Query: 64 atgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagact 123 ||||| || || ||||| || || ||||| | ||||||||||| || || ||||||||| Sbjct: 24748 atgtgtgcttcattccatccaaaagaggatattgttgtgtcagcctccctggatcagact 24807 Query: 124 gttcgtgtttgggatattggt 144 ||||||||||||||||||||| Sbjct: 24808 gttcgtgtttgggatattggt 24828
>gb|BC082785.1| Mus musculus coatomer protein complex subunit alpha, mRNA (cDNA clone IMAGE:3983999), partial cds Length = 4016 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 331 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 390 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttga 374 ||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||||| Sbjct: 391 gcagatgaccggcaagtgaagatctggcgtatgaatgaatcaaaggcatgggaggttga 449
>gb|BC047429.1| Mus musculus coatomer protein complex subunit alpha, mRNA (cDNA clone MGC:7753 IMAGE:3498656), complete cds Length = 4340 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 682 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 741 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttga 374 ||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||||| Sbjct: 742 gcagatgaccggcaagtgaagatctggcgtatgaatgaatcaaaggcatgggaggttga 800
>gb|BC024070.1| Mus musculus coatomer protein complex subunit alpha, mRNA (cDNA clone MGC:37774 IMAGE:5097228), complete cds Length = 4295 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 644 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 703 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttga 374 ||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||||| Sbjct: 704 gcagatgaccggcaagtgaagatctggcgtatgaatgaatcaaaggcatgggaggttga 762
>ref|NM_009938.2| Mus musculus coatomer protein complex subunit alpha (Copa), mRNA Length = 4348 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 717 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 776 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttga 374 ||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||||| Sbjct: 777 gcagatgaccggcaagtgaagatctggcgtatgaatgaatcaaaggcatgggaggttga 835
>dbj|AK151811.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830038A03 product:Warning: possibly reversed clone, full insert sequence Length = 2844 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Minus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 2312 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 2253 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttga 374 ||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||||| Sbjct: 2252 gcagatgaccggcaagtgaagatctggcgtatgaatgaatcaaaggcatgggaggttga 2194
>dbj|AK044485.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930015K17 product:COATOMER PROTEIN ALPHA SUBUNIT homolog [Mus musculus], full insert sequence Length = 2535 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 1694 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 1753 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttga 374 ||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||||| Sbjct: 1754 gcagatgaccggcaagtgaagatctggcgtatgaatgaatcaaaggcatgggaggttga 1812
>dbj|AK043479.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730099C22 product:COATOMER ALPHA SUBUNIT (ALPHA-COAT PROTEIN) (ALPHA-COP) (HEPCOP) (HEP-COP) [CONTAINS: XENIN (XENOPSIN-RELATED PEPTIDE); PROXENIN] homolog [Homo sapiens], full insert sequence Length = 4348 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 717 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 776 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttga 374 ||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||||| Sbjct: 777 gcagatgaccggcaagtgaagatctggcgtatgaatgaatcaaaggcatgggaggttga 835
>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence Length = 214509 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 180505 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 180564 Query: 316 gcagatgaccggcaagtgaag 336 ||||||||||||||||||||| Sbjct: 180565 gcagatgaccggcaagtgaag 180585
>gb|AC074310.29| Mus musculus strain C57BL/6J chromosome 1 clone rp23-137i20, complete sequence Length = 222328 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 127730 catgaccgtggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 127671 Query: 316 gcagatgaccggcaagtgaag 336 ||||||||||||||||||||| Sbjct: 127670 gcagatgaccggcaagtgaag 127650
>ref|XM_962379.1| PREDICTED: Tribolium castaneum similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (LOC655819), mRNA Length = 3663 Score = 79.8 bits (40), Expect = 8e-12 Identities = 124/152 (81%) Strand = Plus / Plus Query: 226 gatgcggttgtgaaatatgtcttggaaggccatgaccgtggtgtcaactgggcatccttc 285 ||||| ||||| ||| ||||| | ||||| ||||| || || || || ||||||| ||| Sbjct: 586 gatgccgttgtcaaacatgtcctcgaagggcatgatcgcggagtaaattgggcatgtttc 645 Query: 286 catcccacattgccactcattgtttctggggcagatgaccggcaagtgaagctgtggaga 345 || || || || |||||||||||||| ||||| |||||||| ||| | || | |||||| Sbjct: 646 caccctactttaccactcattgtttccggggctgatgaccgccaaattaaattatggaga 705 Query: 346 atgaatgataccaaggcttgggaagttgatac 377 ||||||||| |||| |||||||| |||||||| Sbjct: 706 atgaatgattccaaagcttgggaggttgatac 737
>ref|XM_877745.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 19 (LOC533906), mRNA Length = 4323 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_866093.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 2 (LOC533906), mRNA Length = 4359 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877658.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 18 (LOC533906), mRNA Length = 4341 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_613467.2| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 1 (LOC533906), mRNA Length = 4332 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877563.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 17 (LOC533906), mRNA Length = 4335 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877412.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 14 (LOC533906), mRNA Length = 4185 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877371.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 13 (LOC533906), mRNA Length = 4389 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877323.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 12 (LOC533906), mRNA Length = 4344 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877273.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 11 (LOC533906), mRNA Length = 4383 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877229.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 10 (LOC533906), mRNA Length = 4353 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877180.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 9 (LOC533906), mRNA Length = 4332 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 718 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 777 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 778 caaaagcatgggaagttgatac 799
>ref|XM_877129.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 8 (LOC533906), mRNA Length = 2191 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_877032.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 6 (LOC533906), mRNA Length = 4332 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_876936.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 4 (LOC533906), mRNA Length = 1334 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>ref|XM_876871.1| PREDICTED: Bos taurus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP), transcript variant 3 (LOC533906), mRNA Length = 2103 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 721 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 780 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 781 caaaagcatgggaagttgatac 802
>emb|X96768.1|BPACOPGEN B.primigenius mRNA for alpha-cop coat protein Length = 4300 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 296 tgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaatgata 355 ||||||||||||| ||||||||||||||||| ||||||||| | ||| | |||||||| Sbjct: 666 tgccactcattgtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaat 725 Query: 356 ccaaggcttgggaagttgatac 377 | || || |||||||||||||| Sbjct: 726 caaaagcatgggaagttgatac 747
>ref|XM_623195.1| PREDICTED: Apis mellifera similar to ENSANGP00000002872 (LOC550806), mRNA Length = 4042 Score = 75.8 bits (38), Expect = 1e-10 Identities = 125/154 (81%) Strand = Plus / Plus Query: 226 gatgcggttgtgaaatatgtcttggaaggccatgaccgtggtgtcaactgggcatccttc 285 ||||| ||||| ||| |||| ||||| || ||||| | ||||| || ||||||| ||| Sbjct: 681 gatgctgttgtaaaacatgttttggagggtcatgatagaggtgttaattgggcatgtttc 740 Query: 286 catcccacattgccactcattgtttctggggcagatgaccggcaagtgaagctgtggaga 345 ||||| ||||| ||| | ||||||||||| |||||||| || ||| | || ||||| || Sbjct: 741 catccaacattaccattgattgtttctggagcagatgatcgtcaaattaaaatgtggcga 800 Query: 346 atgaatgataccaaggcttgggaagttgatactt 379 ||||||||| | || |||||||||||||| |||| Sbjct: 801 atgaatgatgctaaagcttgggaagttgacactt 834
>dbj|AB179215.1| Macaca fascicularis testis cDNA clone: QtsA-15330, similar to human coatomer protein complex, subunit alpha (COPA), mRNA, RefSeq: NM_004371.2 Length = 2686 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||| ||||| || |||||||| ||||||| ||||| |||| || ||||| |||||| Sbjct: 715 catgatcgtggagtaaactgggctgccttccaccccactatgccccttattgtatctggg 774 Query: 316 gcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttgat 375 |||||||| || ||||||||| | ||| | |||||||| | ||||| ||||| |||||| Sbjct: 775 gcagatgatcgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgggaggttgat 834 Query: 376 ac 377 || Sbjct: 835 ac 836
>ref|XM_222899.3| PREDICTED: Rattus norvegicus coatomer protein complex subunit alpha (predicted) (Copa_predicted), mRNA Length = 4370 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 253 ggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttct 312 |||||||||||||| || || ||||| ||||||| || || |||| || ||||| || Sbjct: 713 ggccatgaccgtggagtgaattgggctgccttccacccgactatgccccttattgtatcg 772 Query: 313 ggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagtt 372 |||||||||||||||||||||||| | ||| | |||||||| | ||||| ||||| ||| Sbjct: 773 ggggcagatgaccggcaagtgaagatatggcgcatgaatgaatcaaaggcatgggaggtt 832 Query: 373 ga 374 || Sbjct: 833 ga 834
>gb|U24105.1| Homo sapiens coatomer protein (COPA) mRNA, complete cds Length = 4692 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 262 cgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggggcagat 321 ||||| || |||||||| ||||||| ||||| |||| || ||||| |||||||||||| Sbjct: 1082 cgtggagtaaactgggctgccttccaccccactatgccccttattgtatctggggcagat 1141 Query: 322 gaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttgatac 377 || || ||||||||| | ||| | |||||||| | ||||| ||||| |||||||| Sbjct: 1142 gatcgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgggaggttgatac 1197
>ref|XM_360968.1| Magnaporthe grisea 70-15 hypothetical protein (MG03511.4) partial mRNA Length = 3663 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 49 cataatcactatgtcatgtgcgcgtccttccaccccaaggaggacctggttgtgtcagca 108 ||||| ||||||| |||||| ||| ||||||||||||||||||||||| ||||| || Sbjct: 418 cataaccactatgccatgtgtgcgcaattccaccccaaggaggacctggtcgtgtcggct 477 Query: 109 tcgctagatcag 120 ||||| |||||| Sbjct: 478 tcgctggatcag 489 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 331 gtgaagctgtggagaatgaatgataccaaggcttgggaagttgatac 377 |||||||| ||| | |||| ||| |||||||||||||| |||||||| Sbjct: 718 gtgaagctttggcgcatgagtgagaccaaggcttgggaggttgatac 764
>gb|BC038447.1| Homo sapiens coatomer protein complex, subunit alpha, mRNA (cDNA clone MGC:45155 IMAGE:5533230), complete cds Length = 4735 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 262 cgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggggcagat 321 ||||| || |||||||| ||||||| ||||| |||| || ||||| |||||||||||| Sbjct: 705 cgtggagtaaactgggctgccttccaccccactatgccccttattgtatctggggcagat 764 Query: 322 gaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttgatac 377 || || ||||||||| | ||| | |||||||| | ||||| ||||| |||||||| Sbjct: 765 gatcgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgggaggttgatac 820
>ref|NM_004371.2| Homo sapiens coatomer protein complex, subunit alpha (COPA), mRNA Length = 5064 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 262 cgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggggcagat 321 ||||| || |||||||| ||||||| ||||| |||| || ||||| |||||||||||| Sbjct: 1082 cgtggagtaaactgggctgccttccaccccactatgccccttattgtatctggggcagat 1141 Query: 322 gaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagttgatac 377 || || ||||||||| | ||| | |||||||| | ||||| ||||| |||||||| Sbjct: 1142 gatcgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgggaggttgatac 1197
>ref|NM_001031405.1| Gallus gallus coatomer protein complex, subunit alpha (COPA), mRNA Length = 4338 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 253 ggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttct 312 ||||| || ||||| || |||||||| |||||||||||||| ||||||| ||||| || Sbjct: 668 ggccacgatcgtggagtgaactgggctgccttccatcccacaatgccactgattgtgtca 727 Query: 313 ggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagtt 372 || || ||||| || ||||||||| | ||||| ||||| || | ||||| ||||| ||| Sbjct: 728 ggagctgatgatcgacaagtgaagatctggaggatgaacgaatcaaaggcctgggaggtt 787 Query: 373 gatactt 379 || |||| Sbjct: 788 gacactt 794
>emb|AJ851796.1| Gallus gallus mRNA for hypothetical protein, clone 34d13 Length = 4338 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 253 ggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttct 312 ||||| || ||||| || |||||||| |||||||||||||| ||||||| ||||| || Sbjct: 668 ggccacgatcgtggagtgaactgggctgccttccatcccacaatgccactgattgtgtca 727 Query: 313 ggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagtt 372 || || ||||| || ||||||||| | ||||| ||||| || | ||||| ||||| ||| Sbjct: 728 ggagctgatgatcgacaagtgaagatctggaggatgaacgaatcaaaggcctgggaggtt 787 Query: 373 gatactt 379 || |||| Sbjct: 788 gacactt 794
>ref|XM_749639.1| Aspergillus fumigatus Af293 coatomer subunit alpha (Afu3g08840) partial mRNA Length = 3639 Score = 60.0 bits (30), Expect = 7e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 232 gttgtgaaatatgtcttggaaggccatgaccgtggtgtcaactgggcatccttccatccc 291 |||||||||| |||| |||||||||| ||||| ||||| ||||||| |||||||| || Sbjct: 616 gttgtgaaatttgtcctggaaggccacgaccgaggtgtgaactgggtgtccttccaccca 675 Query: 292 acattgccactcattgtttctggggcagatgaccggcaagtgaagctgtggagaatgaat 351 || | || || ||||| |||| || ||| || || | || |||||||||||||||| | Sbjct: 676 actctacctctgattgtctctgcgggagacgatcgcctggtcaagctgtggagaatgagt 735 Query: 352 gataccaaggcttgggaagttgatac 377 || || || || |||||||| ||||| Sbjct: 736 gacacgaaagcctgggaagtcgatac 761
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 60.0 bits (30), Expect = 7e-06 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand = Plus / Minus Query: 55 cactatgtcatgtgcgcgtccttccaccccaaggagg---acctggttgtgtcagcatcg 111 |||||||||||||| || |||||||||||||| | |||| || ||||| || ||| Sbjct: 312557 cactatgtcatgtgtgcccaattccaccccaaggatgccgacctcgtcgtgtccgcctcg 312498 Query: 112 ctagatcagactgttcgtgtttgggata 139 || ||||||||||||||||||||||||| Sbjct: 312497 ctcgatcagactgttcgtgtttgggata 312470
>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of Podospora anserina Length = 101256 Score = 60.0 bits (30), Expect = 7e-06 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 55 cactatgtcatgtgcgcgtccttccaccccaaggagg---acctggttgtgtcagcatcg 111 |||||||||||||| || |||||||||||||| | |||| || ||||| || ||| Sbjct: 9638 cactatgtcatgtgtgcccaattccaccccaaggatgccgacctcgtcgtgtccgcctcg 9697 Query: 112 ctagatcagactgttcgtgtttgggata 139 || ||||||||||||||||||||||||| Sbjct: 9698 ctcgatcagactgttcgtgtttgggata 9725
>ref|XM_459159.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D16929g) partial mRNA Length = 3630 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| |||||| ||||| |||||||||||||||| Sbjct: 718 tggagaatgagtgatactaaggcctgggaagttgatactt 757
>ref|XM_716656.1| Candida albicans SC5314 hypothetical protein (CaO19_1672), mRNA Length = 3666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| |||||| || ||||||||||||||||||| Sbjct: 718 tggagaatgagtgatactaaagcttgggaagttgatactt 757
>ref|XM_716537.1| Candida albicans SC5314 hypothetical protein (CaO19_9241), mRNA Length = 3666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| |||||| || ||||||||||||||||||| Sbjct: 718 tggagaatgagtgatactaaagcttgggaagttgatactt 757
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| |||||| ||||| |||||||||||||||| Sbjct: 1302989 tggagaatgagtgatactaaggcctgggaagttgatactt 1303028
>dbj|AK186354.1| Mus musculus cDNA, clone:Y0G0137B05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000066903, based on BLAT search Length = 203 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||||||| ||||||||| | ||||||| || || |||| || ||||| |||||| Sbjct: 133 catgaccgtggagtcaactggnctgccttccacccgactatgccccttattgtatctggg 192 Query: 316 gcagatgaccg 326 ||||||||||| Sbjct: 193 gcagatgaccg 203
>dbj|AK185827.1| Mus musculus cDNA, clone:Y0G0135F20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000066903, based on BLAT search Length = 205 Score = 56.0 bits (28), Expect = 1e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 256 catgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggg 315 ||||||| ||| ||||||||||| ||||||| || || |||| || ||||| |||||| Sbjct: 135 catgaccntggagtcaactgggctgccttccacccgactatgccccttattgtatctggg 194 Query: 316 gcagatgaccg 326 ||||||||||| Sbjct: 195 gcagatgaccg 205
>emb|AL513282.10| Human DNA sequence from clone RP11-179G5 on chromosome 1 Contains a laminin receptor 1 (ribosomal protein SA, 67 kDa) (LAMR1) pseudogene the PXF gene for peroxisomal farnesylated protein and the 3' end of the COPA gene for coatomer protein complex subunit alpha, complete sequence Length = 76737 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 262 cgtggtgtcaactgggcatccttccatcccacattgccactcattgtttctggggcagat 321 ||||| || |||||||| ||||||| ||||| |||| || ||||| |||||||||||| Sbjct: 59266 cgtggagtaaactgggctgccttccaccccactatgccccttattgtatctggggcagat 59207 Query: 322 gaccggcaagtgaag 336 || || ||||||||| Sbjct: 59206 gatcgtcaagtgaag 59192
>gb|BC075251.1| Xenopus laevis coatomer protein complex, subunit alpha, mRNA (cDNA clone MGC:84477 IMAGE:7020631), complete cds Length = 3934 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 115 gatcagactgttcgtgtttgggatattggtgccctgaggaagaaga 160 ||||||||||| || |||||||||||| || |||||||||||||| Sbjct: 515 gatcagactgtgcgagtttgggatatttctggcctgaggaagaaga 560 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacgtacttgtgt 32 ||||||||||||||||| || |||||||| Sbjct: 404 atctggaactggcagtctcgcacttgtgt 432
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 241 tatgtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcc 290 |||||| | ||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 123311 tatgtcctcgaaggtcacgaccgaggtgtcaactgggcttccttccatcc 123262
>ref|XM_571751.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 3938 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 241 tatgtcttggaaggccatgaccgtggtgtcaactgggcatccttccatcc 290 |||||| | ||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 773 tatgtcctcgaaggtcacgaccgaggtgtcaactgggcttccttccatcc 822
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 113 tagatcagactgttcgtgtttgggatattg 142 ||||||||||||| |||||||||||||||| Sbjct: 52234 tagatcagactgtccgtgtttgggatattg 52263
>ref|XM_388115.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein (FG07939.1) partial mRNA Length = 3663 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 253 ggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtt 309 ||||| ||||||||||| ||||||| | |||||||||||| |||| ||||||||| Sbjct: 637 ggccacgaccgtggtgttaactgggtcgctttccatcccacaatgcccctcattgtt 693 Score = 46.1 bits (23), Expect = 0.11 Identities = 53/63 (84%) Strand = Plus / Plus Query: 79 caccccaaggaggacctggttgtgtcagcatcgctagatcagactgttcgtgtttgggat 138 ||||||||||| ||||| || || || |||||||| |||||| | || || ||||||||| Sbjct: 448 caccccaaggaagacctcgtcgtatctgcatcgctcgatcagtccgtccgcgtttgggat 507 Query: 139 att 141 ||| Sbjct: 508 att 510
>ref|XM_791712.1| PREDICTED: Strongylocentrotus purpuratus similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (LOC592176), mRNA Length = 4208 Score = 50.1 bits (25), Expect = 0.007 Identities = 100/125 (80%) Strand = Plus / Plus Query: 253 ggccatgaccgtggtgtcaactgggcatccttccatcccacattgccactcattgtttct 312 |||||||||||||| || ||||||||| | |||||||| || |||| | ||| | ||| Sbjct: 583 ggccatgaccgtggagtgaactgggcagctttccatccaaccatgcctttgattctgtct 642 Query: 313 ggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaagtt 372 | ||| ||||| || | || ||||| ||||| ||||||||| ||||||| ||||| || Sbjct: 643 gcggctgatgatcgctatgtcaagctctggaggatgaatgatgccaaggcctgggaggtg 702 Query: 373 gatac 377 ||||| Sbjct: 703 gatac 707
>ref|XM_504161.1| Yarrowia lipolytica CLIB122, YALI0E19767g predicted mRNA Length = 3735 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Plus Query: 263 gtggtgtcaactgggcatccttccatcccacattgccactcattgtttctgg 314 |||||||||||||||| | ||||||||||| |||| |||||||| ||||| Sbjct: 722 gtggtgtcaactgggcgactttccatcccactctgcctctcattgtgtctgg 773
>emb|Z74193.1|SCYDL145C S.cerevisiae chromosome IV reading frame ORF YDL145c Length = 4436 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| || ||| || ||||||||||||||||||| Sbjct: 3246 tggagaatgagtgctacgaaagcttgggaagttgatactt 3207
>emb|Z74192.1|SCYDL144C S.cerevisiae chromosome IV reading frame ORF YDL144c Length = 5043 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| || ||| || ||||||||||||||||||| Sbjct: 2519 tggagaatgagtgctacgaaagcttgggaagttgatactt 2480
>emb|Z46617.1|SCASCOPI S.cerevisiae DNA for alpha subunit of coatomer complex Length = 6477 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| || ||| || ||||||||||||||||||| Sbjct: 2239 tggagaatgagtgctacgaaagcttgggaagttgatactt 2278
>emb|X83754.1|SCGACOP S.cerevisiae alpha-COP gene Length = 4110 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| || ||| || ||||||||||||||||||| Sbjct: 1013 tggagaatgagtgctacgaaagcttgggaagttgatactt 1052
>gb|DQ332446.1| Synthetic construct Saccharomyces cerevisiae clone FLH148603.01X COP1 gene, complete sequence Length = 3606 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 340 tggagaatgaatgataccaaggcttgggaagttgatactt 379 |||||||||| || ||| || ||||||||||||||||||| Sbjct: 706 tggagaatgagtgctacgaaagcttgggaagttgatactt 745
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Plus Query: 263 gtggtgtcaactgggcatccttccatcccacattgccactcattgtttctgg 314 |||||||||||||||| | ||||||||||| |||| |||||||| ||||| Sbjct: 2360846 gtggtgtcaactgggcgactttccatcccactctgcctctcattgtgtctgg 2360897
>ref|XM_323673.1| Neurospora crassa OR74A hypothetical protein (NCU10066.1) partial mRNA Length = 3672 Score = 44.1 bits (22), Expect = 0.42 Identities = 70/86 (81%) Strand = Plus / Plus Query: 55 cactatgtcatgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgcta 114 ||||| ||||||||||| ||||| |||||||||||||| | || || || || || Sbjct: 424 cactacgtcatgtgcgcccagttccatcccaaggaggacctcatcgtttccgcctccctc 483 Query: 115 gatcagactgttcgtgtttgggatat 140 || ||||||||||| ||||||||||| Sbjct: 484 gaccagactgttcgcgtttgggatat 509 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 334 aagctgtggagaatgaatgataccaaggcttgggaagttgatac 377 ||||||||| | |||| || ||||||||||||||||| ||||| Sbjct: 718 aagctgtggcgcatgagcgagaccaaggcttgggaagtcgatac 761
>ref|XM_952788.1| Neurospora crassa OR74A hypothetical protein (NCU10066.1) partial mRNA Length = 3672 Score = 44.1 bits (22), Expect = 0.42 Identities = 70/86 (81%) Strand = Plus / Plus Query: 55 cactatgtcatgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgcta 114 ||||| ||||||||||| ||||| |||||||||||||| | || || || || || Sbjct: 424 cactacgtcatgtgcgcccagttccatcccaaggaggacctcatcgtttccgcctccctc 483 Query: 115 gatcagactgttcgtgtttgggatat 140 || ||||||||||| ||||||||||| Sbjct: 484 gaccagactgttcgcgtttgggatat 509 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 334 aagctgtggagaatgaatgataccaaggcttgggaagttgatac 377 ||||||||| | |||| || ||||||||||||||||| ||||| Sbjct: 718 aagctgtggcgcatgagcgagaccaaggcttgggaagtcgatac 761
>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland Research Institute) complete sequence Length = 237199 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 tcattgtgtccaactcagagg 454 ||||||||||||||||||||| Sbjct: 140679 tcattgtgtccaactcagagg 140659
>ref|XM_755227.1| Ustilago maydis 521 hypothetical protein (UM04173.1) partial mRNA Length = 3717 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 55 cactatgtcatgtgcgcgtccttccaccccaaggaggacct 95 ||||| ||||||||||| |||||||||||||||||||| Sbjct: 412 cactacgtcatgtgcgctcagttccaccccaaggaggacct 452 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 250 gaaggccatgaccgtggtgtcaactgggcatccttccatcccac 293 |||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 622 gaaggccacgaccgcggcgtcaactgggcctcgttccaccccac 665
>gb|AC109152.13| Mus musculus chromosome 18, clone RP23-166J4, complete sequence Length = 206894 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 cagatgaacactgatctgttt 216 ||||||||||||||||||||| Sbjct: 36435 cagatgaacactgatctgttt 36455
>gb|AC090615.9| Homo sapiens chromosome 17, clone RP11-578C11, complete sequence Length = 142895 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 cattgccactcattgtttctg 313 ||||||||||||||||||||| Sbjct: 124710 cattgccactcattgtttctg 124730
>gb|AC026254.9| Homo sapiens chromosome 17, clone RP11-173M1, complete sequence Length = 154906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cattgccactcattgtttctg 313 ||||||||||||||||||||| Sbjct: 97075 cattgccactcattgtttctg 97055
>gb|AC067938.1|AC067938 Neurospora crassa chromosome 7, clone G21-F8, complete sequence Length = 37068 Score = 42.1 bits (21), Expect = 1.7 Identities = 69/85 (81%) Strand = Plus / Minus Query: 55 cactatgtcatgtgcgcgtccttccaccccaaggaggacctggttgtgtcagcatcgcta 114 ||||| ||||||||||| ||||| |||||||||||||| | || || || || || Sbjct: 23582 cactacgtcatgtgcgcccagttccatcccaaggaggacctcatcgtttccgcctccctc 23523 Query: 115 gatcagactgttcgtgtttgggata 139 || ||||||||||| |||||||||| Sbjct: 23522 gaccagactgttcgcgtttgggata 23498
>gb|AC102039.8| Mus musculus chromosome 5, clone RP23-262L7, complete sequence Length = 168142 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gggcataatcactatgtcat 65 |||||||||||||||||||| Sbjct: 77257 gggcataatcactatgtcat 77276
>gb|BC075582.1| Xenopus tropicalis TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, mRNA (cDNA clone MGC:89568 IMAGE:6993997), complete cds Length = 2044 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctgttcgtgtttgggatatt 141 |||||||||||||||||||| Sbjct: 1775 ctgttcgtgtttgggatatt 1794
>gb|AC161228.7| Mus musculus chromosome 3, clone RP24-77I5, complete sequence Length = 222551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ctcagatgaacactgatctg 213 |||||||||||||||||||| Sbjct: 73126 ctcagatgaacactgatctg 73107
>gb|AC118138.2| Homo sapiens BAC clone RP11-451K15 from 7, complete sequence Length = 180150 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 83648 ggtgtcacctgcagatgaca 83629
>gb|AC123909.2| Homo sapiens chromosome 16 clone RP11-27L11, complete sequence Length = 134922 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gaacactgatctgtttgggg 220 |||||||||||||||||||| Sbjct: 56730 gaacactgatctgtttgggg 56711
>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence Length = 200088 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ctcagatgaacactgatctg 213 |||||||||||||||||||| Sbjct: 602 ctcagatgaacactgatctg 621
>emb|AL713866.4| Human DNA sequence from clone RP11-309H21 on chromosome 1 Contains a processed pseudogene similar to heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), complete sequence Length = 142390 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tctcactcagatgaacactg 208 |||||||||||||||||||| Sbjct: 29107 tctcactcagatgaacactg 29088
>gb|AC134866.3| Homo sapiens BAC clone RP11-1398B17 from 7, complete sequence Length = 172963 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 67170 ggtgtcacctgcagatgaca 67189
>ref|NM_001006778.1| Xenopus tropicalis TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa (taf5l), mRNA Length = 2044 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctgttcgtgtttgggatatt 141 |||||||||||||||||||| Sbjct: 1775 ctgttcgtgtttgggatatt 1794
>gb|AC138783.10| Homo sapiens PAC clone RP5-962D3 from 7, complete sequence Length = 176141 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 95631 ggtgtcacctgcagatgaca 95612
>emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; segment 4/5 Length = 297750 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ggcatccttccatcccacat 295 |||||||||||||||||||| Sbjct: 168585 ggcatccttccatcccacat 168566
>gb|AC115105.2| Homo sapiens PAC clone RP4-629E22 from 7, complete sequence Length = 60442 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 5386 ggtgtcacctgcagatgaca 5405
>gb|AC105418.5| Homo sapiens BAC clone RP11-450O3 from 7, complete sequence Length = 195834 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 151748 ggtgtcacctgcagatgaca 151767
>gb|AC148301.3| Pan troglodytes BAC clone CH251-69O15 from chromosome 7, complete sequence Length = 166304 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 83936 ggtgtcacctgcagatgaca 83917
>gb|AC006995.5| Homo sapiens BAC clone RP11-396K3 from 7, complete sequence Length = 211531 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 101715 ggtgtcacctgcagatgaca 101696
>gb|AC004166.12| Homo sapiens Chromosome 7 BAC Clone 239c10, complete sequence Length = 275197 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 243942 ggtgtcacctgcagatgaca 243961
>gb|AC009062.8| Homo sapiens chromosome 16 clone RP11-298C15, complete sequence Length = 207345 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 gaacactgatctgtttgggg 220 |||||||||||||||||||| Sbjct: 57941 gaacactgatctgtttgggg 57960
>gb|AC005080.2|AC005080 Homo sapiens BAC clone CTA-269P13 from 7q11.2, complete sequence Length = 124526 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 60533 ggtgtcacctgcagatgaca 60552
>gb|AC134616.4| Homo sapiens PAC clone RP4-630L23 from 7, complete sequence Length = 136431 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 62526 ggtgtcacctgcagatgaca 62545
>ref|XM_554165.1| Anopheles gambiae str. PEST ENSANGP00000025772 (ENSANGG00000002369), partial mRNA Length = 735 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacg 23 |||||||||||||||||||| Sbjct: 196 atctggaactggcagtcacg 215
>ref|XM_319442.1| Anopheles gambiae str. PEST ENSANGP00000002872 (ENSANGG00000002369), partial mRNA Length = 3696 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 atctggaactggcagtcacg 23 |||||||||||||||||||| Sbjct: 355 atctggaactggcagtcacg 374
>gb|AC005071.2|AC005071 Homo sapiens clone RG161A02, complete sequence Length = 209382 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggtgtcacctgcagatgaca 181 |||||||||||||||||||| Sbjct: 55371 ggtgtcacctgcagatgaca 55352
>emb|CR761718.2| Xenopus tropicalis finished cDNA, clone TGas086d19 Length = 2110 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ctgttcgtgtttgggatatt 141 |||||||||||||||||||| Sbjct: 1840 ctgttcgtgtttgggatatt 1859 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,074,801 Number of Sequences: 3902068 Number of extensions: 4074801 Number of successful extensions: 67851 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 67470 Number of HSP's gapped (non-prelim): 355 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
