Clone Name | bastl29g07 |
---|---|
Clone Library Name | barley_pub |
>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SEC (EC 2.4.1.-) (Protein SECRET AGENT) Length = 977 Score = 62.0 bits (149), Expect = 7e-10 Identities = 27/43 (62%), Positives = 34/43 (79%) Frame = +1 Query: 328 NEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLLG 456 +++ LALAHQ YK G + QALEH N VY++NP RTDNLLL+G Sbjct: 52 DDDARLALAHQLYKGGDFKQALEHSNMVYQRNPLRTDNLLLIG 94
>OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc) (OGT) Length = 1151 Score = 33.9 bits (76), Expect = 0.20 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = +1 Query: 289 VSLDARSKQLVGVNEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 453 V L+ S+ L V E LAH+ ++SG Y +A ++ N V++ +P LLLL Sbjct: 116 VVLNGVSETLKKVTE-----LAHRQFQSGNYVEAEKYCNLVFQSDPNNLPTLLLL 165
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 32.3 bits (72), Expect = 0.58 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 22 IPASGEAPSFITALSPPPQNLSRPREISGPRWSRPPDLGFPRDA 153 +P +G P + + P+N P+ +GP + PP GFPR+A Sbjct: 450 VPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQGGFPRNA 493
>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)| (Fragment) Length = 290 Score = 32.0 bits (71), Expect = 0.76 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -2 Query: 261 RWPLGSRPRAPLTPSHTSSPPRTAGAARWRASL--RNESIARKP*IRWPRPTR 109 R P+ + P AP P SSPPR L + SI R+P RW TR Sbjct: 198 RPPVATSPPAPQEPVPVSSPPRVPTPPSTPVPLPEKRRSILREPTFRWTSLTR 250
>Y4928_PSEAE (Q9HUN6) UPF0313 protein PA4928| Length = 747 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = -2 Query: 312 LAPRVQGHRGQQESRRWR--WPLGSRPRAPLTPSHTSSPPRTA-GAARWRASLRNESIA 145 L P Q G+ +S R + P GS+ L HT PPR + G W +N++ A Sbjct: 674 LVPTYQPDTGEYQSARRKNSTPAGSKKAGKLLTQHTGLPPRASDGGKPWSKGQQNKATA 732
>CYTSA_BRARE (Q2KN93) Cytospin-A| Length = 1132 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 Query: 255 PLGSRPRAPLTPSHTSSPPRTAGAARWRASLRNESIARKP 136 P PR PL+PS +PP A + R S+ A KP Sbjct: 873 PTAPLPRTPLSPSPMKTPPAAAVSPIQRHSITGSMAAAKP 912
>ZN499_HUMAN (Q96K62) Zinc finger protein 499| Length = 511 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -2 Query: 315 LLAPRVQGHRGQQESRRWRWPLGSRPRAPLTPSHTSSP 202 LLA R GH G SR+ R P + AP TP+ P Sbjct: 156 LLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEGP 193
>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 Length = 1203 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 255 PLGSRPRAPLTP-SHTSSPPRTAGAARWRASLRNESIARKP*IRWPRP 115 P+G PR L+P H+ PPRT +A RAS + S+ P P P Sbjct: 1016 PVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPP 1063
>PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane intrinsic| protein 2.8) (OsPIP2.8) Length = 280 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 45 VVHHSTLPSSPKPLAPARDFGPALV*ATGS 134 VVH +T+P + + PAR GPALV G+ Sbjct: 204 VVHLATIPITGTGINPARSLGPALVLGLGT 233
>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22| Length = 881 Score = 29.3 bits (64), Expect = 4.9 Identities = 25/79 (31%), Positives = 33/79 (41%) Frame = -2 Query: 327 NTDELLAPRVQGHRGQQESRRWRWPLGSRPRAPLTPSHTSSPPRTAGAARWRASLRNESI 148 ++ L PR + R R P G RPR S PPR A R R + + S Sbjct: 796 SSQSLSPPRRRAERSVSPQRP---PPGRRPRGDSLSRSPSPPPRYAREQRRRRNSSSASA 852 Query: 147 ARKP*IRWPRPTRARNLAR 91 +R P R R R+L+R Sbjct: 853 SRSPPHR--DSNRRRSLSR 869
>FUT7_HUMAN (Q11130) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 7) (FUCT-VII) (Selectin-ligand synthase) Length = 342 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 7/60 (11%) Frame = -2 Query: 309 APRVQGHRGQQESRRWRWPLGSRPRAPL-------TPSHTSSPPRTAGAARWRASLRNES 151 A V H + ++RR PL RPR +PSHT G W S R +S Sbjct: 88 ADAVVFHHRELQTRRSHLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDS 147
>Y037_MYCPN (P75077) Hypothetical protein MPN037 (B01_orf147)| Length = 147 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +2 Query: 293 PWTRGASSSSVLMKRTTWLLHIRATNQENI-VRHWSMEMLF 412 PWT S S + TTW+L N +I V WS + L+ Sbjct: 28 PWTITTSVSRSTLSSTTWILWTWLFNSVSIFVSRWSFDFLY 68
>ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase its3 (EC| 2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) Length = 742 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/40 (42%), Positives = 25/40 (62%) Frame = +1 Query: 10 RNSPIPASGEAPSFITALSPPPQNLSRPREISGPRWSRPP 129 R+SPI ++ E PS ++ SP QNL ++S P+ SR P Sbjct: 118 RDSPIVSALEPPSSNSSSSPQLQNLK--HQLSSPQPSRAP 155
>EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear antigen 4)| (EBNA-4) (EBNA-3B) Length = 938 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 258 WPLGSRPRAPLTPSHTSSPPRTAGAARWRASLR 160 WP+ + P P+ S PP TA +W LR Sbjct: 597 WPVVQPSQTPDDPTKQSRPPETAAPRQWPMPLR 629
>DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsive| phosphoprotein) Length = 766 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +1 Query: 37 EAPSFITALSPPPQNLSRPREISGPR-WSRPPDLGFP 144 ++PSF T SPPP + P P WS LG P Sbjct: 552 QSPSFATPASPPPPTVWCPTTSVAPNAWSSTSPLGNP 588
>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1046 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 349 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 453 LAH+ Y++G + A H ++ + P T LLLL Sbjct: 27 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 61
>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1036 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 349 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 453 LAH+ Y++G + A H ++ + P T LLLL Sbjct: 17 LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 51
>CYTSA_FUGRU (Q2KN94) Cytospin-A| Length = 1118 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 240 PRAPLTPSHTSSPPRTAGAARWRASLRNESIARKP 136 PR PL+PS +PP A + R S+ A KP Sbjct: 861 PRTPLSPSPMKTPPAAAVSPIQRHSISGSMSAAKP 895
>CYTSA_CHICK (Q2KN97) Cytospin-A| Length = 1118 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 240 PRAPLTPSHTSSPPRTAGAARWRASLRNESIARKP 136 PR PL+PS +PP A + R S+ A KP Sbjct: 864 PRTPLSPSPMKTPPAAAVSPMQRHSISGPISASKP 898 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.132 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,637,752 Number of Sequences: 219361 Number of extensions: 1117040 Number of successful extensions: 3786 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3515 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3773 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)