ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide N-a... 62 7e-10
2OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide N-acetylglu... 34 0.20
3PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 32 0.58
4TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding prote... 32 0.76
5Y4928_PSEAE (Q9HUN6) UPF0313 protein PA4928 31 1.3
6CYTSA_BRARE (Q2KN93) Cytospin-A 30 2.9
7ZN499_HUMAN (Q96K62) Zinc finger protein 499 30 2.9
8HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated... 30 3.8
9PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane ... 30 3.8
10CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22 29 4.9
11FUT7_HUMAN (Q11130) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) ... 29 6.4
12Y037_MYCPN (P75077) Hypothetical protein MPN037 (B01_orf147) 29 6.4
13ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase it... 29 6.4
14EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear a... 29 6.4
15DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsi... 28 8.4
16OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide N-acetylglu... 28 8.4
17OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide N-acetylgluco... 28 8.4
18CYTSA_FUGRU (Q2KN94) Cytospin-A 28 8.4
19CYTSA_CHICK (Q2KN97) Cytospin-A 28 8.4

>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SEC (EC 2.4.1.-)
           (Protein SECRET AGENT)
          Length = 977

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +1

Query: 328 NEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLLG 456
           +++  LALAHQ YK G + QALEH N VY++NP RTDNLLL+G
Sbjct: 52  DDDARLALAHQLYKGGDFKQALEHSNMVYQRNPLRTDNLLLIG 94



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>OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc)
           (OGT)
          Length = 1151

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +1

Query: 289 VSLDARSKQLVGVNEEDHLALAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 453
           V L+  S+ L  V E     LAH+ ++SG Y +A ++ N V++ +P     LLLL
Sbjct: 116 VVLNGVSETLKKVTE-----LAHRQFQSGNYVEAEKYCNLVFQSDPNNLPTLLLL 165



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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 22  IPASGEAPSFITALSPPPQNLSRPREISGPRWSRPPDLGFPRDA 153
           +P +G  P  +  +   P+N   P+  +GP +  PP  GFPR+A
Sbjct: 450 VPFNGPNPQQMNPMGGMPKNGMPPQFRNGPVYGVPPQGGFPRNA 493



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>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -2

Query: 261 RWPLGSRPRAPLTPSHTSSPPRTAGAARWRASL--RNESIARKP*IRWPRPTR 109
           R P+ + P AP  P   SSPPR          L  +  SI R+P  RW   TR
Sbjct: 198 RPPVATSPPAPQEPVPVSSPPRVPTPPSTPVPLPEKRRSILREPTFRWTSLTR 250



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>Y4928_PSEAE (Q9HUN6) UPF0313 protein PA4928|
          Length = 747

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -2

Query: 312 LAPRVQGHRGQQESRRWR--WPLGSRPRAPLTPSHTSSPPRTA-GAARWRASLRNESIA 145
           L P  Q   G+ +S R +   P GS+    L   HT  PPR + G   W    +N++ A
Sbjct: 674 LVPTYQPDTGEYQSARRKNSTPAGSKKAGKLLTQHTGLPPRASDGGKPWSKGQQNKATA 732



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>CYTSA_BRARE (Q2KN93) Cytospin-A|
          Length = 1132

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 255 PLGSRPRAPLTPSHTSSPPRTAGAARWRASLRNESIARKP 136
           P    PR PL+PS   +PP  A +   R S+     A KP
Sbjct: 873 PTAPLPRTPLSPSPMKTPPAAAVSPIQRHSITGSMAAAKP 912



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>ZN499_HUMAN (Q96K62) Zinc finger protein 499|
          Length = 511

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -2

Query: 315 LLAPRVQGHRGQQESRRWRWPLGSRPRAPLTPSHTSSP 202
           LLA R  GH G   SR+ R P   +  AP TP+    P
Sbjct: 156 LLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEGP 193



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>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1203

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 255  PLGSRPRAPLTP-SHTSSPPRTAGAARWRASLRNESIARKP*IRWPRP 115
            P+G  PR  L+P  H+  PPRT  +A  RAS  + S+   P    P P
Sbjct: 1016 PVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPP 1063



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>PIP28_ORYSA (Q7Y1E6) Probable aquaporin PIP2.8 (Plasma membrane intrinsic|
           protein 2.8) (OsPIP2.8)
          Length = 280

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 45  VVHHSTLPSSPKPLAPARDFGPALV*ATGS 134
           VVH +T+P +   + PAR  GPALV   G+
Sbjct: 204 VVHLATIPITGTGINPARSLGPALVLGLGT 233



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>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22|
          Length = 881

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 25/79 (31%), Positives = 33/79 (41%)
 Frame = -2

Query: 327  NTDELLAPRVQGHRGQQESRRWRWPLGSRPRAPLTPSHTSSPPRTAGAARWRASLRNESI 148
            ++  L  PR +  R     R    P G RPR        S PPR A   R R +  + S 
Sbjct: 796  SSQSLSPPRRRAERSVSPQRP---PPGRRPRGDSLSRSPSPPPRYAREQRRRRNSSSASA 852

Query: 147  ARKP*IRWPRPTRARNLAR 91
            +R P  R     R R+L+R
Sbjct: 853  SRSPPHR--DSNRRRSLSR 869



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>FUT7_HUMAN (Q11130) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 7)
           (FUCT-VII) (Selectin-ligand synthase)
          Length = 342

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
 Frame = -2

Query: 309 APRVQGHRGQQESRRWRWPLGSRPRAPL-------TPSHTSSPPRTAGAARWRASLRNES 151
           A  V  H  + ++RR   PL  RPR          +PSHT       G   W  S R +S
Sbjct: 88  ADAVVFHHRELQTRRSHLPLAQRPRGQPWVWASMESPSHTHGLSHLRGIFNWVLSYRRDS 147



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>Y037_MYCPN (P75077) Hypothetical protein MPN037 (B01_orf147)|
          Length = 147

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 293 PWTRGASSSSVLMKRTTWLLHIRATNQENI-VRHWSMEMLF 412
           PWT   S S   +  TTW+L     N  +I V  WS + L+
Sbjct: 28  PWTITTSVSRSTLSSTTWILWTWLFNSVSIFVSRWSFDFLY 68



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>ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase its3 (EC|
           2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase)
           (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide
           kinase)
          Length = 742

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +1

Query: 10  RNSPIPASGEAPSFITALSPPPQNLSRPREISGPRWSRPP 129
           R+SPI ++ E PS  ++ SP  QNL    ++S P+ SR P
Sbjct: 118 RDSPIVSALEPPSSNSSSSPQLQNLK--HQLSSPQPSRAP 155



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>EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear antigen 4)|
           (EBNA-4) (EBNA-3B)
          Length = 938

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 258 WPLGSRPRAPLTPSHTSSPPRTAGAARWRASLR 160
           WP+    + P  P+  S PP TA   +W   LR
Sbjct: 597 WPVVQPSQTPDDPTKQSRPPETAAPRQWPMPLR 629



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>DAB2_MOUSE (P98078) Disabled homolog 2 (DOC-2) (Mitogen-responsive|
           phosphoprotein)
          Length = 766

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 37  EAPSFITALSPPPQNLSRPREISGPR-WSRPPDLGFP 144
           ++PSF T  SPPP  +  P     P  WS    LG P
Sbjct: 552 QSPSFATPASPPPPTVWCPTTSVAPNAWSSTSPLGNP 588



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>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1046

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 349 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 453
           LAH+ Y++G +  A  H   ++ + P  T  LLLL
Sbjct: 27  LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 61



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>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase 110 kDa subunit (EC
           2.4.1.-) (O-GlcNAc transferase p110 subunit)
          Length = 1036

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 349 LAHQSYKSGKYSQALEHGNAVYEKNPRRTDNLLLL 453
           LAH+ Y++G +  A  H   ++ + P  T  LLLL
Sbjct: 17  LAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLL 51



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>CYTSA_FUGRU (Q2KN94) Cytospin-A|
          Length = 1118

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 240 PRAPLTPSHTSSPPRTAGAARWRASLRNESIARKP 136
           PR PL+PS   +PP  A +   R S+     A KP
Sbjct: 861 PRTPLSPSPMKTPPAAAVSPIQRHSISGSMSAAKP 895



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>CYTSA_CHICK (Q2KN97) Cytospin-A|
          Length = 1118

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 240 PRAPLTPSHTSSPPRTAGAARWRASLRNESIARKP 136
           PR PL+PS   +PP  A +   R S+     A KP
Sbjct: 864 PRTPLSPSPMKTPPAAAVSPMQRHSISGPISASKP 898


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,637,752
Number of Sequences: 219361
Number of extensions: 1117040
Number of successful extensions: 3786
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3773
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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