ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1F100A_HUMAN (Q8TB05) Protein FAM100A 30 4.4

>F100A_HUMAN (Q8TB05) Protein FAM100A|
          Length = 177

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 261 AAAADGPMEVDAASPPVQELVVGHASTKSAAASGLPSHSSP 383
           +  +  PM   A SPP       HA+T S+AAS  P+ +SP
Sbjct: 93  SGGSGSPMAATATSPPPH---FPHAATSSSAASSWPTAASP 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,799,578
Number of Sequences: 219361
Number of extensions: 581453
Number of successful extensions: 2140
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2140
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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