ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 753 0.0
2ref|XM_469513.1| Oryza sativa (japonica cultivar-group), mRNA 291 1e-75
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 291 1e-75
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 291 1e-75
5gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033... 291 1e-75
6dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 283 3e-73
8dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic D... 283 3e-73
9dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 3e-73
10ref|XM_469514.1| Oryza sativa (japonica cultivar-group), mRNA 276 6e-71
11dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
12dbj|AK105672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
13gb|AY874357.1| Xenopus borealis clone 21 RAG-1 (Rag-1) gene, par... 40 6.7
14gb|AY874356.1| Xenopus muelleri clone b32 RAG-1 (Rag-1) gene, pa... 40 6.7
15gb|AY874355.1| Xenopus sp. MHNG 2644.60 RAG-1 (Rag-1) gene, part... 40 6.7
16ref|XM_629288.1| Dictyostelium discoideum hypothetical protein (... 40 6.7
17gb|AY648754.1| Danio rerio cotamer alpha mRNA, complete cds 40 6.7
18emb|CR937029.1| M.truncatula DNA sequence from clone MTH2-105B15... 40 6.7
19gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, com... 40 6.7
20ref|NM_001001941.1| Danio rerio coatomer protein complex, subuni... 40 6.7
21emb|AL590669.11| Human DNA sequence from clone RP11-76K24 on chr... 40 6.7
22emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chr... 40 6.7
23emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in ... 40 6.7
24emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in ... 40 6.7
25emb|CR378661.1| M.truncatula DNA sequence from clone XX-10B15, c... 40 6.7
26gb|AY523743.1| Xenopus sp. VUB 0921 recombinase activating prote... 40 6.7
27ref|XM_222899.3| PREDICTED: Rattus norvegicus coatomer protein c... 40 6.7
28gb|AY294009.1| Danio rerio coatomer protein complex subunit alph... 40 6.7
29emb|AL928956.11| Mouse DNA sequence from clone RP23-74G16 on chr... 40 6.7
30emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chr... 40 6.7 
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score =  753 bits (380), Expect = 0.0
 Identities = 422/435 (97%), Gaps = 1/435 (0%)
 Strand = Plus / Minus

                                                                        
Query: 59   cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
            |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 3637 cagctttcgccgttagtggtgatacagttttctatgtgaaggaccgcttcctccgtttct 3578

                                                                        
Query: 119  atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3577 atgagtactctacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 3518

                                                                        
Query: 179  gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
            |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3517 gcttgaatcagtcaccaaggacattatcatatagcccaactgagaatgctgtcttgatct 3458

                                                                        
Query: 239  gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
            |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3457 gctctgatgttgatgggggctcatatgaactcttcattgttcctaaagattctgctggca 3398

                                                                        
Query: 299  gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3397 gggccgattatttgcaggatgcaaagaagggatctggcggttctgcagttttcatagccc 3338

                                                                        
Query: 359  ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3337 ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 3278

                                                                        
Query: 419  atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
            ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 3277 atgagattgtgaagaaaagccctcttcctatcgcaactgatgttatttactatgctggaa 3218

                           
Query: 479  ctggt-acatattgt 492
            | ||| |||||||||
Sbjct: 3217 ccggtaacatattgt 3203



 Score =  123 bits (62), Expect = 6e-25
 Identities = 62/62 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    agcagcttaagcaggacacacatcttcttcccctccgagatccaaatcaccaaactgaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 agcagcttaagcaggacacacatcttcttcccctccgagatccaaatcaccaaactgaca 5844

              
Query: 61   gc 62
            ||
Sbjct: 5843 gc 5842
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>ref|XM_469513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3657

 Score =  291 bits (147), Expect = 1e-75
 Identities = 356/426 (83%)
 Strand = Plus / Plus

                                                                        
Query: 59   cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
            |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 968  cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 1027

                                                                        
Query: 119  atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
             ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 1028 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 1087

                                                                        
Query: 179  gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
            ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 1088 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 1147

                                                                        
Query: 239  gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
            |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 1148 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 1207

                                                                        
Query: 299  gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
            |||| || |||||||||||||| ||||||||| |||| || || || |||||| | || |
Sbjct: 1208 gggctgactatttgcaggatgcaaagaagggagctggtgggtcagctgttttcgtggcac 1267

                                                                        
Query: 359  ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
            | ||| ||||||||||||| |||||||| ||||| || ||||| ||||||| ||||||||
Sbjct: 1268 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaagaatcttaaga 1327

                                                                        
Query: 419  atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
            |||| || || |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 1328 atgaaatcgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 1387

                  
Query: 479  ctggta 484
            ||||||
Sbjct: 1388 ctggta 1393
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  291 bits (147), Expect = 1e-75
 Identities = 356/426 (83%)
 Strand = Plus / Minus

                                                                            
Query: 59       cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
                |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 28427575 cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 28427516

                                                                            
Query: 119      atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
                 ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 28427515 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 28427456

                                                                            
Query: 179      gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
                ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 28427455 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 28427396

                                                                            
Query: 239      gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
                |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 28427395 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 28427336

                                                                            
Query: 299      gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
                |||| || |||||||||||||| ||||||||| |||| || || || |||||| | || |
Sbjct: 28427335 gggctgactatttgcaggatgcaaagaagggagctggtgggtcagctgttttcgtggcac 28427276

                                                                            
Query: 359      ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
                | ||| ||||||||||||| |||||||| ||||| || ||||| ||||||| ||||||||
Sbjct: 28427275 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaagaatcttaaga 28427216

                                                                            
Query: 419      atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
                |||| || || |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 28427215 atgaaatcgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 28427156

                      
Query: 479      ctggta 484
                ||||||
Sbjct: 28427155 ctggta 28427150



 Score =  276 bits (139), Expect = 6e-71
 Identities = 354/426 (83%)
 Strand = Plus / Minus

                                                                            
Query: 59       cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
                |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 28438967 cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 28438908

                                                                            
Query: 119      atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
                 ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 28438907 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 28438848

                                                                            
Query: 179      gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
                ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 28438847 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 28438788

                                                                            
Query: 239      gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
                |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 28438787 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 28438728

                                                                            
Query: 299      gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
                |||| || |||||||||||||| ||||||||  |||| || || || |||||| | || |
Sbjct: 28438727 gggctgactatttgcaggatgcaaagaagggggctggtgggtcagctgttttcgtggcac 28438668

                                                                            
Query: 359      ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
                | ||| ||||||||||||| |||||||| ||||| || ||||| |||| || ||||||||
Sbjct: 28438667 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaggaatcttaaga 28438608

                                                                            
Query: 419      atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
                | || ||||| |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 28438607 acgaaattgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 28438548

                      
Query: 479      ctggta 484
                ||||||
Sbjct: 28438547 ctggta 28438542
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  291 bits (147), Expect = 1e-75
 Identities = 356/426 (83%)
 Strand = Plus / Minus

                                                                            
Query: 59       cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
                |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 28518899 cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 28518840

                                                                            
Query: 119      atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
                 ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 28518839 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 28518780

                                                                            
Query: 179      gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
                ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 28518779 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 28518720

                                                                            
Query: 239      gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
                |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 28518719 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 28518660

                                                                            
Query: 299      gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
                |||| || |||||||||||||| ||||||||| |||| || || || |||||| | || |
Sbjct: 28518659 gggctgactatttgcaggatgcaaagaagggagctggtgggtcagctgttttcgtggcac 28518600

                                                                            
Query: 359      ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
                | ||| ||||||||||||| |||||||| ||||| || ||||| ||||||| ||||||||
Sbjct: 28518599 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaagaatcttaaga 28518540

                                                                            
Query: 419      atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
                |||| || || |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 28518539 atgaaatcgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 28518480

                      
Query: 479      ctggta 484
                ||||||
Sbjct: 28518479 ctggta 28518474



 Score =  276 bits (139), Expect = 6e-71
 Identities = 354/426 (83%)
 Strand = Plus / Minus

                                                                            
Query: 59       cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
                |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 28530291 cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 28530232

                                                                            
Query: 119      atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
                 ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 28530231 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 28530172

                                                                            
Query: 179      gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
                ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 28530171 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 28530112

                                                                            
Query: 239      gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
                |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 28530111 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 28530052

                                                                            
Query: 299      gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
                |||| || |||||||||||||| ||||||||  |||| || || || |||||| | || |
Sbjct: 28530051 gggctgactatttgcaggatgcaaagaagggggctggtgggtcagctgttttcgtggcac 28529992

                                                                            
Query: 359      ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
                | ||| ||||||||||||| |||||||| ||||| || ||||| |||| || ||||||||
Sbjct: 28529991 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaggaatcttaaga 28529932

                                                                            
Query: 419      atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
                | || ||||| |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 28529931 acgaaattgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 28529872

                      
Query: 479      ctggta 484
                ||||||
Sbjct: 28529871 ctggta 28529866
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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score =  291 bits (147), Expect = 1e-75
 Identities = 356/426 (83%)
 Strand = Plus / Minus

                                                                         
Query: 59    cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
             |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 21705 cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 21646

                                                                         
Query: 119   atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
              ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 21645 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 21586

                                                                         
Query: 179   gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
             ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 21585 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 21526

                                                                         
Query: 239   gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
             |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 21525 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 21466

                                                                         
Query: 299   gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
             |||| || |||||||||||||| ||||||||| |||| || || || |||||| | || |
Sbjct: 21465 gggctgactatttgcaggatgcaaagaagggagctggtgggtcagctgttttcgtggcac 21406

                                                                         
Query: 359   ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
             | ||| ||||||||||||| |||||||| ||||| || ||||| ||||||| ||||||||
Sbjct: 21405 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaagaatcttaaga 21346

                                                                         
Query: 419   atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
             |||| || || |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 21345 atgaaatcgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 21286

                   
Query: 479   ctggta 484
             ||||||
Sbjct: 21285 ctggta 21280



 Score =  276 bits (139), Expect = 6e-71
 Identities = 354/426 (83%)
 Strand = Plus / Minus

                                                                         
Query: 59    cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
             |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 33097 cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 33038

                                                                         
Query: 119   atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
              ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 33037 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 32978

                                                                         
Query: 179   gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
             ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 32977 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 32918

                                                                         
Query: 239   gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
             |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 32917 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 32858

                                                                         
Query: 299   gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
             |||| || |||||||||||||| ||||||||  |||| || || || |||||| | || |
Sbjct: 32857 gggctgactatttgcaggatgcaaagaagggggctggtgggtcagctgttttcgtggcac 32798

                                                                         
Query: 359   ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
             | ||| ||||||||||||| |||||||| ||||| || ||||| |||| || ||||||||
Sbjct: 32797 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaggaatcttaaga 32738

                                                                         
Query: 419   atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
             | || ||||| |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 32737 acgaaattgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 32678

                   
Query: 479   ctggta 484
             ||||||
Sbjct: 32677 ctggta 32672
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>dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G08, full
            insert sequence
          Length = 4221

 Score =  291 bits (147), Expect = 1e-75
 Identities = 356/426 (83%)
 Strand = Plus / Plus

                                                                        
Query: 59   cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
            |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 1112 cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 1171

                                                                        
Query: 119  atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
             ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 1172 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 1231

                                                                        
Query: 179  gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
            ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 1232 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 1291

                                                                        
Query: 239  gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
            |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 1292 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 1351

                                                                        
Query: 299  gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
            |||| || |||||||||||||| ||||||||| |||| || || || |||||| | || |
Sbjct: 1352 gggctgactatttgcaggatgcaaagaagggagctggtgggtcagctgttttcgtggcac 1411

                                                                        
Query: 359  ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
            | ||| ||||||||||||| |||||||| ||||| || ||||| ||||||| ||||||||
Sbjct: 1412 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaagaatcttaaga 1471

                                                                        
Query: 419  atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
            |||| || || |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 1472 atgaaatcgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 1531

                  
Query: 479  ctggta 484
            ||||||
Sbjct: 1532 ctggta 1537
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  283 bits (143), Expect = 3e-73
 Identities = 355/426 (83%)
 Strand = Plus / Minus

                                                                           
Query: 59      cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
               |||||||| | || |||||| |||| || ||||||||||||||||| || || || ||||
Sbjct: 2076882 cagctttctctgtgagtggtgatactgtcttctatgtgaaggaccgttttcttcggttct 2076823

                                                                           
Query: 119     atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
                ||| ||||| |||||||||||||| ||| ||||||| |||||||| ||||| || ||||
Sbjct: 2076822 ttgaatactccacacagaaggaggttcagttggctccaataagaagacctggatcggtca 2076763

                                                                           
Query: 179     gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
               |||||||||| ||||| |||||| | || ||||| |||||||| || || ||| |||| |
Sbjct: 2076762 gcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctgattt 2076703

                                                                           
Query: 239     gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
               |||||||||||||||| ||||| ||||| ||||  || ||||| || |||||||||||||
Sbjct: 2076702 gctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgctggca 2076643

                                                                           
Query: 299     gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
               || | |||||||||||||| || ||||||||| |||| || || || |||||  | || |
Sbjct: 2076642 ggactgattatttgcaggaggcaaagaagggagctggtgggtcagctgtttttgttgcac 2076583

                                                                           
Query: 359     ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
               | ||| |||||||||| || |||||||| ||||| || ||| | ||||||| ||||||||
Sbjct: 2076582 gcaacaggtttgcagtgctcgagaagagtagcaatcaagttctggtgaagaatcttaaga 2076523

                                                                           
Query: 419     atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
               |||| ||||| ||||||||||||||||||||||  |  ||||  ||||| |||||||| |
Sbjct: 2076522 atgaaattgtaaagaaaagccctcttcctattgcgatggatgcaatttattatgctggga 2076463

                     
Query: 479     ctggta 484
               ||||||
Sbjct: 2076462 ctggta 2076457
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>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1610_C11
          Length = 104553

 Score =  283 bits (143), Expect = 3e-73
 Identities = 355/426 (83%)
 Strand = Plus / Minus

                                                                        
Query: 59   cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
            |||||||| | || |||||| |||| || ||||||||||||||||| || || || ||||
Sbjct: 2299 cagctttctctgtgagtggtgatactgtcttctatgtgaaggaccgttttcttcggttct 2240

                                                                        
Query: 119  atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
             ||| ||||| |||||||||||||| ||| ||||||| |||||||| ||||| || ||||
Sbjct: 2239 ttgaatactccacacagaaggaggttcagttggctccaataagaagacctggatcggtca 2180

                                                                        
Query: 179  gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
            |||||||||| ||||| |||||| | || ||||| |||||||| || || ||| |||| |
Sbjct: 2179 gcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctgattt 2120

                                                                        
Query: 239  gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
            |||||||||||||||| ||||| ||||| ||||  || ||||| || |||||||||||||
Sbjct: 2119 gctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgctggca 2060

                                                                        
Query: 299  gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
            || | |||||||||||||| || ||||||||| |||| || || || |||||  | || |
Sbjct: 2059 ggactgattatttgcaggaggcaaagaagggagctggtgggtcagctgtttttgttgcac 2000

                                                                        
Query: 359  ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
            | ||| |||||||||| || |||||||| ||||| || ||| | ||||||| ||||||||
Sbjct: 1999 gcaacaggtttgcagtgctcgagaagagtagcaatcaagttctggtgaagaatcttaaga 1940

                                                                        
Query: 419  atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
            |||| ||||| ||||||||||||||||||||||  |  ||||  ||||| |||||||| |
Sbjct: 1939 atgaaattgtaaagaaaagccctcttcctattgcgatggatgcaatttattatgctggga 1880

                  
Query: 479  ctggta 484
            ||||||
Sbjct: 1879 ctggta 1874
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>dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I16, full
            insert sequence
          Length = 4284

 Score =  283 bits (143), Expect = 3e-73
 Identities = 355/426 (83%)
 Strand = Plus / Plus

                                                                        
Query: 59   cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
            |||||||| | || |||||| |||| || ||||||||||||||||| || || || ||||
Sbjct: 1195 cagctttctctgtgagtggtgatactgtcttctatgtgaaggaccgttttcttcggttct 1254

                                                                        
Query: 119  atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
             ||| ||||| |||||||||||||| ||| ||||||| |||||||| ||||| || ||||
Sbjct: 1255 ttgaatactccacacagaaggaggttcagttggctccaataagaagacctggatcggtca 1314

                                                                        
Query: 179  gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
            |||||||||| ||||| |||||| | || ||||| |||||||| || || ||| |||| |
Sbjct: 1315 gcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctgattt 1374

                                                                        
Query: 239  gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
            |||||||||||||||| ||||| ||||| ||||  || ||||| || |||||||||||||
Sbjct: 1375 gctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgctggca 1434

                                                                        
Query: 299  gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
            || | |||||||||||||| || ||||||||| |||| || || || |||||  | || |
Sbjct: 1435 ggactgattatttgcaggaggcaaagaagggagctggtgggtcagctgtttttgttgcac 1494

                                                                        
Query: 359  ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
            | ||| |||||||||| || |||||||| ||||| || ||| | ||||||| ||||||||
Sbjct: 1495 gcaacaggtttgcagtgctcgagaagagtagcaatcaagttctggtgaagaatcttaaga 1554

                                                                        
Query: 419  atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
            |||| ||||| ||||||||||||||||||||||  |  ||||  ||||| |||||||| |
Sbjct: 1555 atgaaattgtaaagaaaagccctcttcctattgcgatggatgcaatttattatgctggga 1614

                  
Query: 479  ctggta 484
            ||||||
Sbjct: 1615 ctggta 1620
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>ref|XM_469514.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3657

 Score =  276 bits (139), Expect = 6e-71
 Identities = 354/426 (83%)
 Strand = Plus / Plus

                                                                        
Query: 59   cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
            |||||||| | || |||||  |||| || ||||||||||||||||| || || ||||| |
Sbjct: 968  cagctttctctgtgagtggagatactgttttctatgtgaaggaccgttttcttcgttttt 1027

                                                                        
Query: 119  atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
             ||| | | | ||||||||||| || ||| | ||||| |||||||| ||||| ||||| |
Sbjct: 1028 ttgaattcaccacacagaaggaagttcagcttgctccaataagaagacctggatcagtga 1087

                                                                        
Query: 179  gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
            ||||||| || ||||| | |||| |||| || || |||||||| || |||||| |||| |
Sbjct: 1088 gcttgaaccagtcacccaagacactatcttacagtccaactgaaaatgctgtcctgattt 1147

                                                                        
Query: 239  gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
            |||||||||||||||| |||||||| || |||| ||||||||| || |||||||||||||
Sbjct: 1148 gctctgatgtggatggaggctcatacgaactctacattgttcccaaggattctgctggca 1207

                                                                        
Query: 299  gggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcatagccc 358
            |||| || |||||||||||||| ||||||||  |||| || || || |||||| | || |
Sbjct: 1208 gggctgactatttgcaggatgcaaagaagggggctggtgggtcagctgttttcgtggcac 1267

                                                                        
Query: 359  ggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtcttaaga 418
            | ||| ||||||||||||| |||||||| ||||| || ||||| |||| || ||||||||
Sbjct: 1268 gcaacaggtttgcagtccttgagaagagtagcaatcaagttttggtgaggaatcttaaga 1327

                                                                        
Query: 419  atgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgctggaa 478
            | || ||||| |||||||||||||||||||||| ||| ||||  ||||| |||||||| |
Sbjct: 1328 acgaaattgtaaagaaaagccctcttcctattgccacggatgcaatttattatgctggga 1387

                  
Query: 479  ctggta 484
            ||||||
Sbjct: 1388 ctggta 1393
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>dbj|AK100467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J01, full
           insert sequence
          Length = 2535

 Score =  208 bits (105), Expect = 1e-50
 Identities = 234/277 (84%)
 Strand = Plus / Minus

                                                                       
Query: 59  cagctttcgccgttagtggtaatacagtgttctatgtgaaggaccgcttcctccgtttct 118
           |||||||| | || |||||| |||| || ||||||||||||||||| || || || ||||
Sbjct: 316 cagctttctctgtgagtggtgatactgtcttctatgtgaaggaccgttttcttcggttct 257

                                                                       
Query: 119 atgagtactcaacacagaaggaggtccaggtggctccgataagaaggcctgggtcagtca 178
            ||| ||||| |||||||||||||| ||| ||||||| |||||||| ||||| || ||||
Sbjct: 256 ttgaatactccacacagaaggaggttcagttggctccaataagaagacctggatcggtca 197

                                                                       
Query: 179 gcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttgatct 238
           |||||||||| ||||| |||||| | || ||||| |||||||| || || ||| |||| |
Sbjct: 196 gcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctgattt 137

                                                                       
Query: 239 gctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgctggca 298
           |||||||||||||||| ||||| ||||| ||||  || ||||| || |||||||||||||
Sbjct: 136 gctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgctggca 77

                                                
Query: 299 gggccgattatttgcaggatgcgaagaagggatctgg 335
           || | |||||||||||||| || ||||||||| ||||
Sbjct: 76  ggactgattatttgcaggaggcaaagaagggagctgg 40
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>dbj|AK105672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A08, full
           insert sequence
          Length = 3045

 Score =  196 bits (99), Expect = 5e-47
 Identities = 257/310 (82%)
 Strand = Plus / Plus

                                                                       
Query: 175 gtcagcttgaatcaatcaccaaggacattatcatatagcccaactgagaacgctgtcttg 234
           |||||||||||||| ||||| |||||| | || ||||| |||||||| || || ||| ||
Sbjct: 7   gtcagcttgaatcagtcacccaggacactgtcgtatagtccaactgaaaatgccgtcctg 66

                                                                       
Query: 235 atctgctctgatgtggatgggggctcatatgagctcttcattgttcctaaagattctgct 294
           || ||||||||||||||||| ||||| ||||| ||||  || ||||| || |||||||||
Sbjct: 67  atttgctctgatgtggatggaggctcctatgaactctatatagttccgaaggattctgct 126

                                                                       
Query: 295 ggcagggccgattatttgcaggatgcgaagaagggatctggcggttctgcagttttcata 354
           |||||| | |||||||||||||| || |||| |||| |||| || || || |||||  | 
Sbjct: 127 ggcaggactgattatttgcaggaggcaaagaggggagctggtgggtcagctgtttttgtt 186

                                                                       
Query: 355 gcccggaaccggtttgcagtcctggagaagagcagcaaccaggttttagtgaagagtctt 414
           || || ||| |||||||||| || |||||||| ||||| || ||| | ||||||| ||||
Sbjct: 187 gcacgcaacaggtttgcagtgctcgagaagagtagcaatcaagttctggtgaagaatctt 246

                                                                       
Query: 415 aagaatgagattgtgaagaaaagccctcttcctattgncactgatgttatttactatgct 474
           |||||||| ||||| ||||||||||||||||||||||  |  ||||  ||||| ||||||
Sbjct: 247 aagaatgaaattgtaaagaaaagccctcttcctattgcgatggatgcaatttattatgct 306

                     
Query: 475 ggaactggta 484
           || |||||||
Sbjct: 307 gggactggta 316
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>gb|AY874357.1| Xenopus borealis clone 21 RAG-1 (Rag-1) gene, partial cds
          Length = 1141

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 gttctgcagttttcatagcc 357
           ||||||||||||||||||||
Sbjct: 392 gttctgcagttttcatagcc 373
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>gb|AY874356.1| Xenopus muelleri clone b32 RAG-1 (Rag-1) gene, partial cds
          Length = 923

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 gttctgcagttttcatagcc 357
           ||||||||||||||||||||
Sbjct: 244 gttctgcagttttcatagcc 225
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>gb|AY874355.1| Xenopus sp. MHNG 2644.60 RAG-1 (Rag-1) gene, partial cds
          Length = 1141

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 gttctgcagttttcatagcc 357
           ||||||||||||||||||||
Sbjct: 392 gttctgcagttttcatagcc 373
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>ref|XM_629288.1| Dictyostelium discoideum hypothetical protein (DDB0219819), partial
            mRNA
          Length = 3165

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 415  aagaatgagattgtgaagaa 434
            ||||||||||||||||||||
Sbjct: 1957 aagaatgagattgtgaagaa 1938
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>gb|AY648754.1| Danio rerio cotamer alpha mRNA, complete cds
          Length = 4096

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  aagaatgagattgtgaagaa 434
            ||||||||||||||||||||
Sbjct: 1439 aagaatgagattgtgaagaa 1458
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>emb|CR937029.1| M.truncatula DNA sequence from clone MTH2-105B15 on chromosome 3,
             complete sequence
          Length = 112155

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   tgcagttttcatagcccgga 361
             ||||||||||||||||||||
Sbjct: 41150 tgcagttttcatagcccgga 41169
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>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence
          Length = 195511

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   tgaagaaaagccctcttcct 447
             ||||||||||||||||||||
Sbjct: 22814 tgaagaaaagccctcttcct 22833
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>ref|NM_001001941.1| Danio rerio coatomer protein complex, subunit alpha (copa), mRNA
          Length = 4261

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  aagaatgagattgtgaagaa 434
            ||||||||||||||||||||
Sbjct: 1505 aagaatgagattgtgaagaa 1524
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>emb|AL590669.11| Human DNA sequence from clone RP11-76K24 on chromosome 1 Contains the
              gene for a novel protein (FLJ35728) and a CpG island,
              complete sequence
          Length = 169226

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    tgagattgtgaagaaaagcc 439
              ||||||||||||||||||||
Sbjct: 167684 tgagattgtgaagaaaagcc 167665
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>emb|CR848842.7| Human DNA sequence from clone WI2-2998D17 on chromosome 1, complete
            sequence
          Length = 44069

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  tgagattgtgaagaaaagcc 439
            ||||||||||||||||||||
Sbjct: 3443 tgagattgtgaagaaaagcc 3424
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>emb|BX649372.5| Zebrafish DNA sequence from clone DKEY-52K20 in linkage group 2, complete
              sequence
          Length = 249584

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    aagaatgagattgtgaagaa 434
              ||||||||||||||||||||
Sbjct: 148148 aagaatgagattgtgaagaa 148129
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>emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in linkage group 2, complete
              sequence
          Length = 228024

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    aagaatgagattgtgaagaa 434
              ||||||||||||||||||||
Sbjct: 209658 aagaatgagattgtgaagaa 209639
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>emb|CR378661.1| M.truncatula DNA sequence from clone XX-10B15, complete sequence
          Length = 112155

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   tgcagttttcatagcccgga 361
             ||||||||||||||||||||
Sbjct: 41150 tgcagttttcatagcccgga 41169
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>gb|AY523743.1| Xenopus sp. VUB 0921 recombinase activating protein (RAG-1) gene,
           partial cds
          Length = 544

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 gttctgcagttttcatagcc 357
           ||||||||||||||||||||
Sbjct: 230 gttctgcagttttcatagcc 211
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>ref|XM_222899.3| PREDICTED: Rattus norvegicus coatomer protein complex subunit alpha
            (predicted) (Copa_predicted), mRNA
          Length = 4370

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 91   tatgtgaaggaccgcttcctccgt 114
            |||||||||||||| |||||||||
Sbjct: 1109 tatgtgaaggaccgattcctccgt 1132
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>gb|AY294009.1| Danio rerio coatomer protein complex subunit alpha (copa) mRNA,
            complete cds
          Length = 4261

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  aagaatgagattgtgaagaa 434
            ||||||||||||||||||||
Sbjct: 1505 aagaatgagattgtgaagaa 1524
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>emb|AL928956.11| Mouse DNA sequence from clone RP23-74G16 on chromosome 2, complete
            sequence
          Length = 174347

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 260  catatgagctcttcattgtt 279
            ||||||||||||||||||||
Sbjct: 1480 catatgagctcttcattgtt 1499
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>emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chromosome 2, complete
              sequence
          Length = 201328

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    catatgagctcttcattgtt 279
              ||||||||||||||||||||
Sbjct: 200808 catatgagctcttcattgtt 200827


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,225,345
Number of Sequences: 3902068
Number of extensions: 4225345
Number of successful extensions: 75452
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75329
Number of HSP's gapped (non-prelim): 123
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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