>ATK4_ARATH (O81635) Kinesin-4 (Kinesin-like protein D)|
          Length = 987

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +2

Query: 212 NDEGMALRKXXXXXXXXXXXXXWLRQMAPAAV-EALPDRPSEEDFCMALRNGLILCKVLN 388
           +D G+  RK             WLR M   +  +  P  PSEE+F + LR+G++LC VLN
Sbjct: 31  SDVGLVSRKVEESSLRRYEAAGWLRDMIGVSNGKDFPGEPSEEEFRLGLRSGIVLCNVLN 90

Query: 389 RVNPGAIPKVVENPIDAVQWSDGA 460
           +VNPG++ KVVE P D    +DGA
Sbjct: 91  KVNPGSVSKVVEAPDDV---ADGA 111

>CNN2_PIG (Q08094) Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin)|
           (Fragment)
          Length = 296

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKV 418
           +E L       DF   L++G+ILC ++N++ PG++PK+
Sbjct: 38  IEGLTGLSIGPDFQKGLKDGIILCTLMNKLQPGSVPKI 75

>CNN2_BOVIN (Q3SYU6) Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin)|
          Length = 308

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKV 418
           +E L       DF   L++G+ILC ++N++ PG++PK+
Sbjct: 37  IEGLTGLSVGPDFQKGLKDGIILCTLMNKLQPGSVPKI 74

>CNN2_MOUSE (Q08093) Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin)|
          Length = 305

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKV 418
           +E L       DF   L++G+ILC ++N++ PG++PK+
Sbjct: 38  IEGLTGLSIGPDFQKGLKDGVILCTLMNKLQPGSVPKI 75

>CNN2_PONPY (Q5RFN6) Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin)|
          Length = 308

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKV 418
           +E L       DF   L++G ILC ++N++ PG++PK+
Sbjct: 37  IEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVPKI 74

>CNN2_HUMAN (Q99439) Calponin-2 (Calponin H2, smooth muscle) (Neutral calponin)|
          Length = 308

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKV 418
           +E L       DF   L++G ILC ++N++ PG++PK+
Sbjct: 37  IEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVPKI 74

>CNN3_HUMAN (Q15417) Calponin-3 (Calponin, acidic isoform)|
          Length = 329

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 12/33 (36%), Positives = 27/33 (81%)
 Frame = +2

Query: 338 DFCMALRNGLILCKVLNRVNPGAIPKVVENPID 436
           +F + L++G+ILC+++N++ PG++ KV E+ ++
Sbjct: 47  NFQLGLKDGIILCELINKLQPGSVKKVNESSLN 79

>CNN3_RAT (P37397) Calponin-3 (Calponin, acidic isoform) (Calponin,|
           non-muscle isoform)
          Length = 330

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 12/33 (36%), Positives = 27/33 (81%)
 Frame = +2

Query: 338 DFCMALRNGLILCKVLNRVNPGAIPKVVENPID 436
           +F + L++G+ILC+++N++ PG++ KV E+ ++
Sbjct: 47  NFQLGLKDGIILCELINKLQPGSVKKVNESSLN 79

>CNN3_MOUSE (Q9DAW9) Calponin-3 (Calponin, acidic isoform)|
          Length = 330

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 12/33 (36%), Positives = 27/33 (81%)
 Frame = +2

Query: 338 DFCMALRNGLILCKVLNRVNPGAIPKVVENPID 436
           +F + L++G+ILC+++N++ PG++ KV E+ ++
Sbjct: 47  NFQLGLKDGIILCELINKLQPGSVKKVNESSLN 79

>ARHG6_HUMAN (Q15052) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6) (PAK-interacting
           exchange factor alpha) (Alpha-Pix) (COOL-2)
          Length = 776

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = +2

Query: 332 EEDFCMALRNGLILCKVLNRVNPGAIPKVVENP 430
           EE    +L+NG++LCK++NR+ PG++ K   +P
Sbjct: 28  EEFLKSSLKNGVVLCKLINRLMPGSVEKFCLDP 60

>CNN1_SHEEP (Q7YRL2) Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)|
          Length = 297

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 14/41 (34%), Positives = 27/41 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKVVEN 427
           +E +  R    +F   L++G+ILC+ +N++ PG++ KV E+
Sbjct: 38  IEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKVNES 78

>CNN1_RAT (Q08290) Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)|
          Length = 297

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 14/41 (34%), Positives = 27/41 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKVVEN 427
           +E +  R    +F   L++G+ILC+ +N++ PG++ KV E+
Sbjct: 38  IEGVTGRRIGSNFMDGLKDGIILCEFINKLQPGSVKKVNES 78

>CNN1_PIG (Q08092) Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)|
          Length = 297

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 14/41 (34%), Positives = 27/41 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKVVEN 427
           +E +  R    +F   L++G+ILC+ +N++ PG++ KV E+
Sbjct: 38  IEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKVNES 78

>CNN1_MUSPF (Q9GK38) Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)|
          Length = 297

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 14/41 (34%), Positives = 27/41 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKVVEN 427
           +E +  R    +F   L++G+ILC+ +N++ PG++ KV E+
Sbjct: 38  IEGVTGRRIGSNFMDGLKDGIILCEFINKLQPGSVKKVNES 78

>CNN1_MOUSE (Q08091) Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)|
          Length = 297

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 14/41 (34%), Positives = 27/41 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKVVEN 427
           +E +  R    +F   L++G+ILC+ +N++ PG++ KV E+
Sbjct: 38  IEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKVNES 78

>ARHG6_MOUSE (Q8K4I3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 771

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +2

Query: 332 EEDFCMALRNGLILCKVLNRVNPGAIPKVVENP 430
           EE    +L+NG++LCK++NR+ PG++ K    P
Sbjct: 28  EEFLKSSLKNGVVLCKLINRLLPGSVEKYCLEP 60

>ARHG6_RAT (Q5XXR3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 772

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 13/33 (39%), Positives = 24/33 (72%)
 Frame = +2

Query: 332 EEDFCMALRNGLILCKVLNRVNPGAIPKVVENP 430
           EE    +L+NG++LCK+++R+ PG++ K  + P
Sbjct: 28  EEFLKSSLKNGVVLCKLISRLLPGSVEKYCQEP 60

>CNN1_HUMAN (P51911) Calponin-1 (Calponin H1, smooth muscle) (Basic calponin)|
          Length = 297

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 13/41 (31%), Positives = 27/41 (65%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKVVEN 427
           +E +  R    +F   L++G+ILC+ +N++ PG++ K+ E+
Sbjct: 38  IEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKINES 78

>CNN1_CHICK (P26932) Calponin-1 (Calponin, smooth muscle)|
          Length = 292

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKV 418
           +E    R   ++F   L++G+ILC+++N++ PG++ KV
Sbjct: 38  IEGATGRRIGDNFMDGLKDGVILCELINKLQPGSVQKV 75

>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)|
          Length = 1683

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = +2

Query: 305 VEALPDRPSE-EDFCMALRNGLILCKVLNRVNPGAIPKV 418
           ++A+ ++  E +DF  +L NG++LC ++N++ PG I K+
Sbjct: 74  IKAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKI 112

>LRCH4_HUMAN (O75427) Leucine-rich repeats and calponin homology|
           domain-containing protein 4 (Leucine-rich neuronal
           protein)
          Length = 683

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIP 412
           +E+   RP  ED   AL +G+ILC++ N++ P ++P
Sbjct: 548 LESRLQRPLPEDLAEALASGVILCQLANQLRPRSVP 583

>LRCH4_MOUSE (Q921G6) Leucine-rich repeats and calponin homology|
           domain-containing protein 4
          Length = 680

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +2

Query: 305 VEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIP 412
           +E+   +P  ED   AL NG++LC++ N++ P ++P
Sbjct: 545 LESRLQQPLPEDLAEALANGVLLCQLANQLRPRSVP 580

>MYPH_ECHGR (Q24799) Myophilin|
          Length = 190

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 353 LRNGLILCKVLNRVNPGAIPKVVEN 427
           L++G +LCK++N + PG I K+ EN
Sbjct: 52  LKDGTVLCKLMNSIKPGCIKKINEN 76

>MP20_DROME (P14318) Muscle-specific protein 20|
          Length = 184

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +2

Query: 308 EALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKV 418
           E  P   S ED    L++G +LCK++N ++P A+PKV
Sbjct: 33  EKFPAGQSYED---VLKDGQVLCKLINVLSPNAVPKV 66

>ARHG7_HUMAN (Q14155) Rho guanine nucleotide exchange factor 7 (PAK-interacting|
           exchange factor beta) (Beta-Pix) (COOL-1) (p85)
          Length = 803

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 350 ALRNGLILCKVLNRVNPGAIPKVVENP 430
           +L++G++LC++L R+ PG I KV   P
Sbjct: 34  SLKDGVVLCRLLERLLPGTIEKVYPEP 60

>VAV2_MOUSE (Q60992) Protein vav-2|
          Length = 868

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +2

Query: 338 DFCMALRNGLILCKVLNRVNPGAI 409
           D   ALR+G++LC++L+ ++PG+I
Sbjct: 32  DLAQALRDGVLLCQLLHNLSPGSI 55

>VAV2_HUMAN (P52735) Protein vav-2|
          Length = 878

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +2

Query: 338 DFCMALRNGLILCKVLNRVNPGAI 409
           D   ALR+G++LC++L+ ++PG+I
Sbjct: 32  DLAQALRDGVLLCQLLHNLSPGSI 55

>PLSI_CHICK (P19179) Plastin-1 (Fimbrin)|
          Length = 630

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 296 PAAVEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAI 409
           P     LP  PS+     +L +G++LCK++N   P  I
Sbjct: 140 PDCKHILPMNPSDASLFKSLADGILLCKMINFSQPDTI 177

>FIMB3_ARATH (Q9FJ70) Putative fimbrin-like protein 3|
          Length = 714

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 296 PAAVEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAI 409
           P   + LP  P   D    +++G++LCK++N   PG I
Sbjct: 142 PFLKQFLPLDPDSNDLYELVKDGVLLCKLINIAVPGTI 179

>IQG1_YEAST (Q12280) Ras GTPase-activating-like protein IQG1 (IQGAP-related|
           protein 1) (Cytokinesis protein 1)
          Length = 1495

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +2

Query: 326 PSEEDFCM--ALRNGLILCKVLNRVNP 400
           PSE + C+  +LRNG+ L K+  R+NP
Sbjct: 127 PSEIELCVGDSLRNGVFLAKLTQRINP 153

>CB027_HUMAN (Q580R0) Protein C2orf27|
          Length = 203

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -2

Query: 447 HCTASMGFSTTLGMAPGLTRLRTLQRMRPLRRAMQKSSSDGLSGRASTAAGAIC 286
           HC+ S          PG      L   R     +Q+SSS    G A+TAAGA+C
Sbjct: 105 HCSQSWAQWKLWRQRPGFAIWAPLPHWRGTS-LIQQSSSPAAEGPAATAAGAVC 157

>ARHG6_CHICK (Q5ZLR6) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 764

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 332 EEDFCMALRNGLILCKVLNRVNPGAIPKVVENP 430
           EE    +L++G +LCK+++R+ PG+  K    P
Sbjct: 28  EEFLKTSLKDGTVLCKLIHRLLPGSAEKYCLEP 60

>SCG1_MOUSE (P16014) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB)
          Length = 677

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 118 QTHGSSSYRTVPQVPTVGRQERVFEKLRPRGRGSQAE 8
           ++H  + YR   + P  G + R +  L+ RGRGS+ +
Sbjct: 332 RSHHLAHYRASEEEPEYGEESRSYRGLQYRGRGSEED 368

>GA2L2_MOUSE (Q5SSG4) GAS2-like protein 2 (Growth arrest-specific 2-like 2)|
          Length = 860

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 278 WLRQMAPAAVEALPDRPSEEDFCMALRNGLILCKVLNRVNPGAIPKVVENP 430
           WLR +    ++A       ++F   L  GL+LC+  N V   A+  + E P
Sbjct: 41  WLRDLYGLDIDA-------DNFLRVLETGLVLCRHANTVTEAALAFLAEAP 84

>FIMB2_ARATH (Q9FKI0) Fimbrin-like protein 2|
          Length = 687

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 314 LPDRPSEEDFCMALRNGLILCKVLNRVNPGAI 409
           LP  P+   F   +++G++LCK++N   PG I
Sbjct: 146 LPIDPATNAFFDLVKDGVLLCKLINVAVPGTI 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,161,082
Number of Sequences: 219361
Number of extensions: 680427
Number of successful extensions: 2307
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)