ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein) 34 0.19
2SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor 33 0.32
3RS14_RAT (P13471) 40S ribosomal protein S14 32 0.92
4RS14_MOUSE (P62264) 40S ribosomal protein S14 32 0.92
5RS14_HUMAN (P62263) 40S ribosomal protein S14 32 0.92
6RS14_CRIGR (P62265) 40S ribosomal protein S14 32 0.92
7HIS42_SILPO (Q5LR59) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 32 1.2
8RS14_KLULA (P27069) 40S ribosomal protein S14 (RP59) 31 1.6
9KGUA_ACIAD (Q6F7H0) Guanylate kinase (EC 2.7.4.8) (GMP kinase) 31 2.1
10RS14_CHLRE (P46295) 40S ribosomal protein S14 30 2.7
11RS14A_YEAST (P06367) 40S ribosomal protein S14-A (RP59A) 30 3.5
12RS14_PROCL (P48855) 40S ribosomal protein S14 30 3.5
13RS14_PODCA (Q08699) 40S ribosomal protein S14 30 3.5
14RS14B_YEAST (P39516) 40S ribosomal protein S14-B (RP59B) 30 3.5
15RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1) 30 4.6
16RS143_ARATH (P42036) 40S ribosomal protein S14-3 30 4.6
17RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2) 30 4.6
18RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2 30 4.6
19RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1 30 4.6
20RS14_CANAL (Q96W53) 40S ribosomal protein S14 30 4.6
21RS14_CAEEL (P48150) 40S ribosomal protein S14 30 4.6
22ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase... 30 4.6
23RS14_NEUCR (P19115) 40S ribosomal protein S14 (CRP2) 29 7.8 
>REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein)|
          Length = 619

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +3

Query: 99  LPSSSWTSLAD*SPNSPQIPPLS----REIPNLAHGRRPWCRAP 218
           LPSSSW+S+A  +P S    PLS    R +P+ + G  P+ R P
Sbjct: 407 LPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLRIP 450
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>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor|
          Length = 297

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 23/80 (28%), Positives = 28/80 (35%)
 Frame = +3

Query: 3   DTHPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPN 182
           +T PP+    P  C  +   C      PK    P +  T      P     PP  R  P 
Sbjct: 39  ETEPPRCETEPPRCETEPPRC--ETTTPKCETTPPTCRTE----PPTCKTEPPTCRTEPP 92

Query: 183 LAHGRRPWCRAPTPTCLTWP 242
               + P CR   PTC T P
Sbjct: 93  TCKTKPPTCRTEPPTCRTEP 112



 Score = 31.2 bits (69), Expect = 1.6
 Identities = 23/79 (29%), Positives = 27/79 (34%)
 Frame = +3

Query: 6   THPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPNL 185
           T PP  +  P  C  +   C  R   P  +  P +  T      P     PP  R  P  
Sbjct: 89  TEPPTCKTKPPTCRTEPPTC--RTEPPTCKTKPPTCKTE----PPTCKTEPPTCRTEPPT 142

Query: 186 AHGRRPWCRAPTPTCLTWP 242
                P CR   PTC T P
Sbjct: 143 CKTEPPTCRTEPPTCKTEP 161



 Score = 29.6 bits (65), Expect = 4.6
 Identities = 22/79 (27%), Positives = 27/79 (34%)
 Frame = +3

Query: 6   THPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPNL 185
           T PP+    P  C  +   C      P+    P    T+    +P     PP  R  P  
Sbjct: 26  TEPPRCETEPPRCETEPPRCETEP--PRCETEPPRCETT----TPKCETTPPTCRTEPPT 79

Query: 186 AHGRRPWCRAPTPTCLTWP 242
                P CR   PTC T P
Sbjct: 80  CKTEPPTCRTEPPTCKTKP 98



 Score = 28.9 bits (63), Expect = 7.8
 Identities = 22/79 (27%), Positives = 26/79 (32%)
 Frame = +3

Query: 6   THPPQVRWMPCCC*AQAFNCLARNCVPKYRRLPSSSWTSLAD*SPNSPQIPPLSREIPNL 185
           T PP  R  P  C  +   C      P  +  P +  T      P     PP  R  P  
Sbjct: 103 TEPPTCRTEPPTCKTKPPTCKTEP--PTCKTEPPTCRTE----PPTCKTEPPTCRTEPPT 156

Query: 186 AHGRRPWCRAPTPTCLTWP 242
                P C+   PTC T P
Sbjct: 157 CKTEPPTCKTEPPTCKTEP 175
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>RS14_RAT (P13471) 40S ribosomal protein S14|
          Length = 150

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 100 GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146
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>RS14_MOUSE (P62264) 40S ribosomal protein S14|
          Length = 150

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 100 GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146
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>RS14_HUMAN (P62263) 40S ribosomal protein S14|
          Length = 150

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 100 GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146
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>RS14_CRIGR (P62265) 40S ribosomal protein S14|
          Length = 150

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 100 GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146
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>HIS42_SILPO (Q5LR59) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase 2 (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase 2)
          Length = 247

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 110 GRREAPIFWHTVPGETVEGLGSAATR--HPPDL 18
           GR +AP+ WH  P ETV G  SA     H  DL
Sbjct: 20  GRLDAPMLWHVDPFETVSGWASAGAEWMHLTDL 52
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>RS14_KLULA (P27069) 40S ribosomal protein S14 (RP59)|
          Length = 137

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +RS TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 87  GGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133
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>KGUA_ACIAD (Q6F7H0) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 207

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 195 SREQDSGFREKGEGFGENWGFNQRAKSRRKKGGADILAHSSWR 67
           S+ +D+GF E  E FG  +G +Q    ++   G D+L    W+
Sbjct: 61  SQVEDNGFIEYAEVFGNYYGTSQATVKQQLAKGHDVLLEIDWQ 103
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>RS14_CHLRE (P46295) 40S ribosomal protein S14|
          Length = 153

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 103 GGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRR 149
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>RS14A_YEAST (P06367) 40S ribosomal protein S14-A (RP59A)|
          Length = 136

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 86  GGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 132
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>RS14_PROCL (P48855) 40S ribosomal protein S14|
          Length = 151

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +++ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 101 GGNKTKTPGPGGQSALRALARAGMKIGRIEDVTPVPSDSTRRKGGRR 147
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>RS14_PODCA (Q08699) 40S ribosomal protein S14|
          Length = 151

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   S +R  AR G  +GRI       S   R  GGRR
Sbjct: 101 GGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDCTRRKGGRR 147
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>RS14B_YEAST (P39516) 40S ribosomal protein S14-B (RP59B)|
          Length = 137

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 87  GGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133
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>RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)|
          Length = 149

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 99  GGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 145
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>RS143_ARATH (P42036) 40S ribosomal protein S14-3|
          Length = 150

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 100 GGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146
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>RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)|
          Length = 150

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 100 GGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 146
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>RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2|
          Length = 150

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 100 GGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146
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>RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1|
          Length = 150

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 100 GGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146
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>RS14_CANAL (Q96W53) 40S ribosomal protein S14|
          Length = 134

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +++ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 84  GGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDSTRRKGGRR 130
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>RS14_CAEEL (P48150) 40S ribosomal protein S14|
          Length = 152

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 102
           G +R+ TP P   S +R  AR G  +GRI       S   R  GGRR
Sbjct: 102 GGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDCTRRKGGRR 148
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>ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase ATXR3 (EC|
           2.1.1.43) (Trithorax-related protein 3) (TRX-related
           protein 3) (Protein SET DOMAIN GROUP 2)
          Length = 2351

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 168 EKGEGFGENWGFNQRAKSRRK-KGGADILAHSSWRD 64
           EKGE  GE+W  ++  K+ +  KGG +     SWRD
Sbjct: 174 EKGEIVGESWKKDEPTKADKNWKGGKEEREFRSWRD 209
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>RS14_NEUCR (P19115) 40S ribosomal protein S14 (CRP2)|
          Length = 150

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 227 GWSRSSTPWPPPVSKIRDFARKGRDLGRI-----GASISERSPGGRR 102
           G + + TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 100 GGNGTRTPGPGAQSALRALARSGMKIGRIEDVTPTPSDSTRRKGGRR 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.139    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,437,307
Number of Sequences: 219361
Number of extensions: 1027186
Number of successful extensions: 4086
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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