ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, comple... 42 0.59
2gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chrom... 40 2.3
3gb|BT012708.1| Lycopersicon esculentum clone 113586R, mRNA sequence 40 2.3
4gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromo... 40 2.3
5gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, compl... 40 2.3
6emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chr... 40 2.3
7gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosom... 40 2.3
8emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chr... 40 2.3
9emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chro... 40 2.3
10emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chr... 40 2.3
11emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chro... 40 2.3
12emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on ch... 40 2.3
13gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 2.3
14emb|AL359438.19| Human DNA sequence from clone RP11-261A1 on chr... 40 2.3
15emb|AL355582.8| Human DNA sequence from clone RP11-69L15 on chro... 40 2.3
16emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chr... 40 2.3
17emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chr... 40 2.3
18emb|AL031767.13|HS135L22 Human DNA sequence from clone RP1-135L2... 40 2.3
19emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 40 2.3
20emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chro... 40 2.3
21emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chr... 40 2.3
22gb|AC008622.6| Homo sapiens chromosome 19 clone CTB-147N14, comp... 40 2.3
23gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, com... 40 2.3
24gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, c... 40 2.3
25gb|AC068721.4| Homo sapiens BAC clone RP11-545L5 from 4, complet... 40 2.3
26gb|AC067982.6| Homo sapiens chromosome 8, clone RP11-125E23, com... 40 2.3
27gb|AC006271.2|AC006271 Homo sapiens chromosome 19, BAC BC319430 ... 40 2.3
28gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete ... 40 2.3
29gb|AC104785.5| Homo sapiens BAC clone RP11-84C13 from 4, complet... 40 2.3
30gb|AC018717.11| Homo sapiens BAC clone RP11-505H14 from 2, compl... 40 2.3
31gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Can... 40 2.3
32gb|AF002992.2| Homo sapiens chromosome X clone ICRFXc104-C024, Q... 40 2.3
33gb|AC090059.9| Homo sapiens 12 BAC RP11-604C20 (Roswell Park Can... 40 2.3
34dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 2.3
35dbj|AK026419.1| Homo sapiens cDNA: FLJ22766 fis, clone KAIA1188 40 2.3
36emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on ch... 40 2.3
37gb|AC119832.9| Mus musculus chromosome 3, clone RP23-471I16, com... 38 9.2
38gb|AC169675.2| Mus musculus BAC clone RP24-200J3 from chromosome... 38 9.2
39gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete... 38 9.2
40ref|XM_421787.1| PREDICTED: Gallus gallus similar to eukaryotic ... 38 9.2
41gb|AC156937.4| Mus musculus BAC clone RP23-355I5 from chromosome... 38 9.2
42gb|AY449524.1| SEN virus isolate 5-A ORF4, ORF3, ORF2, and ORF1 ... 38 9.2
43gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, c... 38 9.2
44gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, comp... 38 9.2
45gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome... 38 9.2
46gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome... 38 9.2
47gb|AC133207.3| Mus musculus BAC clone RP23-116L23 from chromosom... 38 9.2
48gb|AC122812.4| Mus musculus BAC clone RP23-285M9 from 1, complet... 38 9.2
49gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 38 9.2
50gb|AC098737.3| Mus musculus BAC clone RP23-122D16 from 1, comple... 38 9.2
51gb|AC108420.8| Mus musculus chromosome 7, clone RP23-38E14, comp... 38 9.2
52emb|AL161781.12| Human DNA sequence from clone RP11-297B17 on ch... 38 9.2
53gb|AC158467.3| Mus musculus chromosome 3, clone RP23-116C1, comp... 38 9.2
54emb|AL022153.1|HS23K20 Human DNA sequence from clone RP1-23K20 o... 38 9.2
55emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chr... 38 9.2
56emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster fo... 38 9.2
57gb|AC087889.15| Mus Musculus Strain C57BL6/J Chromosome 10 BAC, ... 38 9.2
58gb|AC026975.5| Homo sapiens chromosome 11, clone RP11-709C9, com... 38 9.2
59gb|AC092713.2| Homo sapiens chromosome 17, clone CTC-780D20, com... 38 9.2
60gb|AC108156.4| Homo sapiens BAC clone RP11-563M4 from 4, complet... 38 9.2
61dbj|AK139366.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 38 9.2
62dbj|AK161574.1| Mus musculus adult male pituitary gland cDNA, RI... 38 9.2
63gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome... 38 9.2
64gb|AC055716.24|AC055716 Homo sapiens 12 BAC RP11-641A6 (Roswell ... 38 9.2
65gb|BC056457.1| Mus musculus myelin transcription factor 1-like, ... 38 9.2
66gb|AC026955.10|AC026955 Homo sapiens chromosome 17, clone RP11-5... 38 9.2
67dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
68gb|AC097462.2| Homo sapiens BAC clone RP11-18O11 from 4, complet... 38 9.2
69gb|AC108059.6| Homo sapiens BAC clone RP11-398G9 from 2, complet... 38 9.2
70gb|AF260927.1|AF260927 Mus musculus D4Cole1e (D4Cole1e) gene, pa... 38 9.2
71gb|AC010982.5| Homo sapiens BAC clone RP11-475I16 from 2, comple... 38 9.2
72dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 9.2
73dbj|AP005783.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
74emb|AJ332926.1|HSA332926 Homo sapiens genomic sequence surroundi... 38 9.2
75gb|AF327433.1| Homo sapiens B-cell specific activator protein BS... 38 9.2
76emb|AL669843.4| Human DNA sequence from clone XXbac-33F23 on chr... 38 9.2
77emb|CT025654.11| Mouse DNA sequence from clone RP24-345F16 on ch... 38 9.2
78gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51... 38 9.2
79gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 9.2
80emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chrom... 38 9.2
81gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, comple... 38 9.2
82emb|CT010437.15| Mouse DNA sequence from clone RP23-333O22 on ch... 38 9.2
83emb|AL606973.29| Mouse DNA sequence from clone RP23-173D8 on chr... 38 9.2 
>gb|AC094080.4| Homo sapiens chromosome 5 clone CTB-77K22, complete sequence
          Length = 118504

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    ggaacttggagctggaggaga 79
             |||||||||||||||||||||
Sbjct: 91834 ggaacttggagctggaggaga 91814
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>gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chromosome 9, complete
             sequence
          Length = 169499

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 23528 gctcctcttcatcttgttca 23547
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>gb|BT012708.1| Lycopersicon esculentum clone 113586R, mRNA sequence
          Length = 1338

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 117 ctcttcttccttgccttgcttctt 140
           ||||||||||||| ||||||||||
Sbjct: 52  ctcttcttccttgtcttgcttctt 75
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>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete
             sequence
          Length = 162544

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 85585 gctcctcttcatcttgttca 85566
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>gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, complete sequence
          Length = 194254

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     acttggaacttggagctgga 74
              ||||||||||||||||||||
Sbjct: 102258 acttggaacttggagctgga 102277
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>emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chromosome 9, complete
             sequence
          Length = 166687

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 95603 gctcctcttcatcttgttca 95584
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>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete
             sequence
          Length = 178254

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    acttggagctggaggagaga 81
             ||||||||||||||||||||
Sbjct: 28681 acttggagctggaggagaga 28662
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>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a
              RAB28, member RAS oncogene family pseudogene (RAB28), a
              pseudogene similar to part of recombining binding protein
              suppressor of hairless (Drosophila) (RBPSUH), two novel
              pseudogenes, a pseudogene similar to part of fibroblast
              growth factor 7 (keratinocyte growth factor) (FGF7), the 3'
              end of a novel gene and two CpG islands, complete sequence
          Length = 163837

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 106541 gctcctcttcatcttgttca 106522
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>emb|BX664718.7| Human DNA sequence from clone RP11-175I6 on chromosome 9 Conatins a
             pseudogene similar to part of fibroblast growth factor 7
             (keratinocyte growth factor) (FGF7), two novel
             pseudogenes, a pseudogene similar to part of G
             protein-coupled receptor 116 (GPR116), a novel gene and a
             pseudogene similar to part of meprin A, alpha (PABA
             peptide hydrolase) (MEP1A), complete sequence
          Length = 167646

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 74606 gctcctcttcatcttgttca 74625
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>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a
              pseudogene similar to part of fibroblast growth factor 7
              (keratinocyte growth factor) (FGF7), three novel
              pseudogenes, two novel genes, a recombining binding protein
              suppressor of hairless (Drosophila) (RBPSUH) pseudogene, a
              RAB28, member RAS oncogene family (RAB28) pseudogene and
              two CpG islands, complete sequence
          Length = 202891

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 107754 gctcctcttcatcttgttca 107773
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>emb|BX005266.6| Human DNA sequence from clone RP11-211N8 on chromosome 9 Contains two
             novel pseudogenes, two novel genes, a recombining binding
             protein suppressor of hairless (Drosophila) (RBPSUH)
             pseudogene, a RAB28, member RAS oncogene family (RAB28)
             pseudogene and a G protein-coupled receptor, family C,
             group 5,member B (GPRC5B) pseudogene, complete sequence
          Length = 157298

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 64988 gctcctcttcatcttgttca 65007
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>emb|AL512625.10| Human DNA sequence from clone RP11-262H14 on chromosome 9 Contains three
              novel genes, a novel pseudogene, two novel pseudogenes
              (LOC339742), a tumor suppressor deleted in oral
              cancer-related 1 (DOC-1R) pseudogene, a pseudogene similar
              to part of prostaglandin E receptor 4 (subtype EP4)
              (PTGER4), a pseudogene similar to part of myosin VA (heavy
              polypeptide 12, myoxin) (MYO5A), a pseudogene similar to
              part of G protein-coupled receptor 116 (GPR116), a
              pseudogene similar to part of fibroblast growth factor 7
              (keratinocyte growth factor) (FGF7) and five CpG islands,
              complete sequence
          Length = 159539

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 110226 gctcctcttcatcttgttca 110245
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    tgcttcttgccgaggtccgc 152
              ||||||||||||||||||||
Sbjct: 409963 tgcttcttgccgaggtccgc 409982
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>emb|AL359438.19| Human DNA sequence from clone RP11-261A1 on chromosome 13 Contains a
              legumain (LGMN) (PRSC1) pseudogene, complete sequence
          Length = 166490

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 131361 gctcctcttcatcttgttca 131380
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>emb|AL355582.8| Human DNA sequence from clone RP11-69L15 on chromosome 9, complete
             sequence
          Length = 115848

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 34451 gctcctcttcatcttgttca 34432
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>emb|AL158048.35| Human DNA sequence from clone RP5-963K15 on chromosome 1p36.21-36.33
              Contains the SLC2A5 gene for solute carrier family 2
              (facilitated glucose/fructose transporter) member 5, two
              novel genes and two CpG islands, complete sequence
          Length = 139111

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 101926 gctcctcttcatcttgttca 101945
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>emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chromosome 6 Contains an
             actin beta (ACTB) pseudogene and part of a novel gene,
             complete sequence
          Length = 107745

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 38894 gctcctcttcatcttgttca 38875
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>emb|AL031767.13|HS135L22 Human DNA sequence from clone RP1-135L22 on chromosome 6p22.2-22.3
              Contains part of a novel gene, complete sequence
          Length = 121212

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 106854 gctcctcttcatcttgttca 106835
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ctgctcttcttccttgcctt 133
              ||||||||||||||||||||
Sbjct: 211965 ctgctcttcttccttgcctt 211946



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ctgctcttcttccttgcctt 133
              ||||||||||||||||||||
Sbjct: 210693 ctgctcttcttccttgcctt 210674



 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ctgctcttcttccttgcctt 133
              ||||||||||||||||||||
Sbjct: 210030 ctgctcttcttccttgcctt 210011



 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 115    tgctcttcttccttgcctt 133
              |||||||||||||||||||
Sbjct: 213383 tgctcttcttccttgcctt 213365
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>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
              pseudogene similar to part of a novel protein
              (DKFZp434A171), a pseudogene similar to part of meprin A,
              alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of a novel transmembrane receptor protein
              and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 121554 gctcctcttcatcttgttca 121535
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>emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chromosome 9, complete
              sequence
          Length = 166827

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 108978 gctcctcttcatcttgttca 108997
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>gb|AC008622.6| Homo sapiens chromosome 19 clone CTB-147N14, complete sequence
          Length = 134882

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     agctggaggagagatggggg 87
              ||||||||||||||||||||
Sbjct: 126521 agctggaggagagatggggg 126502
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>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence
          Length = 194297

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 104464 gctcctcttcatcttgttca 104445
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>gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, complete sequence
          Length = 174147

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 166516 gctcctcttcatcttgttca 166497
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>gb|AC068721.4| Homo sapiens BAC clone RP11-545L5 from 4, complete sequence
          Length = 177270

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 157  gctcctcttcatcttgttca 176
            ||||||||||||||||||||
Sbjct: 5526 gctcctcttcatcttgttca 5507
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>gb|AC067982.6| Homo sapiens chromosome 8, clone RP11-125E23, complete sequence
          Length = 147875

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    gctcctcttcatcttgttca 176
              ||||||||||||||||||||
Sbjct: 119746 gctcctcttcatcttgttca 119727
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>gb|AC006271.2|AC006271 Homo sapiens chromosome 19, BAC BC319430 (CTC-440L2), complete sequence
          Length = 100598

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 81525 gctcctcttcatcttgttca 81544
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>gb|AC025828.3|AC025828 Homo sapiens, clone RP11-13I24, complete sequence
          Length = 152843

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 20741 gctcctcttcatcttgttca 20722
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>gb|AC104785.5| Homo sapiens BAC clone RP11-84C13 from 4, complete sequence
          Length = 112003

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 89583 gctcctcttcatcttgttca 89564
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>gb|AC018717.11| Homo sapiens BAC clone RP11-505H14 from 2, complete sequence
          Length = 172639

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 80008 gctcctcttcatcttgttca 80027
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>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 147895

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 72407 gctcctcttcatcttgttca 72426
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>gb|AF002992.2| Homo sapiens chromosome X clone ICRFXc104-C024, Qc-17E5, Qc-17H2,
             Qc-14E2_B, Qc-12F10, ICRFXc104-D0899 map q28, complete
             sequence
          Length = 104050

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 94735 gctcctcttcatcttgttca 94716
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>gb|AC090059.9| Homo sapiens 12 BAC RP11-604C20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 130125

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 78635 gctcctcttcatcttgttca 78654
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 113     gctgctcttcttccttgccttgct 136
               ||||||||||||||| ||||||||
Sbjct: 3759675 gctgctcttcttcctcgccttgct 3759698
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>dbj|AK026419.1| Homo sapiens cDNA: FLJ22766 fis, clone KAIA1188
          Length = 2572

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  gctcctcttcatcttgttca 176
            ||||||||||||||||||||
Sbjct: 1506 gctcctcttcatcttgttca 1525
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>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete
             sequence
          Length = 186615

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gctcctcttcatcttgttca 176
             ||||||||||||||||||||
Sbjct: 31291 gctcctcttcatcttgttca 31272
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>gb|AC119832.9| Mus musculus chromosome 3, clone RP23-471I16, complete sequence
          Length = 178681

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 161    ctcttcatcttgttcaggg 179
              |||||||||||||||||||
Sbjct: 116812 ctcttcatcttgttcaggg 116830
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>gb|AC169675.2| Mus musculus BAC clone RP24-200J3 from chromosome 17, complete sequence
          Length = 171242

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    ggagctggaggagagatgg 84
             |||||||||||||||||||
Sbjct: 26873 ggagctggaggagagatgg 26855
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>gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete sequence
          Length = 166178

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     gctccacttggaacttgga 68
              |||||||||||||||||||
Sbjct: 139040 gctccacttggaacttgga 139022
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>ref|XM_421787.1| PREDICTED: Gallus gallus similar to eukaryotic translation initiation
            factor 3, subunit 10 theta, 150/170kDa; eukaryotic
            translation initiation factor 3, subunit 10 (theta,
            170kD); Eukaryotic translation initiation factor 3,
            subunit 10, 170kD; eukaryotic translation initia...
            (LOC423927), mRNA
          Length = 5449

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 120  ttcttccttgccttgcttcttgc 142
            ||||||||||| |||||||||||
Sbjct: 2685 ttcttccttgcgttgcttcttgc 2663
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>gb|AC156937.4| Mus musculus BAC clone RP23-355I5 from chromosome 8, complete sequence
          Length = 198479

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 61     aacttggagctggaggaga 79
              |||||||||||||||||||
Sbjct: 148822 aacttggagctggaggaga 148804
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>gb|AY449524.1| SEN virus isolate 5-A ORF4, ORF3, ORF2, and ORF1 genes, complete cds
          Length = 3087

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 31   acctggccgctgccattgc 49
            |||||||||||||||||||
Sbjct: 1996 acctggccgctgccattgc 1978
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>gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, complete sequence
          Length = 221034

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 105    ggctggaggctgctcttct 123
              |||||||||||||||||||
Sbjct: 181368 ggctggaggctgctcttct 181350
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>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence
          Length = 153903

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 112   ggctgctcttcttccttgc 130
             |||||||||||||||||||
Sbjct: 24045 ggctgctcttcttccttgc 24027
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>gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome 5, complete sequence
          Length = 144545

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 112   ggctgctcttcttccttgc 130
             |||||||||||||||||||
Sbjct: 97739 ggctgctcttcttccttgc 97721
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>gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome 13, complete sequence
          Length = 190792

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   ggctggaggctgctcttct 123
             |||||||||||||||||||
Sbjct: 16229 ggctggaggctgctcttct 16211
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>gb|AC133207.3| Mus musculus BAC clone RP23-116L23 from chromosome 10, complete
             sequence
          Length = 222101

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    ttggaacttggagctggag 75
             |||||||||||||||||||
Sbjct: 74069 ttggaacttggagctggag 74087
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>gb|AC122812.4| Mus musculus BAC clone RP23-285M9 from 1, complete sequence
          Length = 208430

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 58     tggaacttggagctggaggagag 80
              |||||||||||||||||| ||||
Sbjct: 172727 tggaacttggagctggagcagag 172749
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>gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-382G13, complete
             sequence
          Length = 142667

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   tcttcttccttgccttgct 136
             |||||||||||||||||||
Sbjct: 23385 tcttcttccttgccttgct 23403
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>gb|AC098737.3| Mus musculus BAC clone RP23-122D16 from 1, complete sequence
          Length = 212615

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 58     tggaacttggagctggaggagag 80
              |||||||||||||||||| ||||
Sbjct: 153503 tggaacttggagctggagcagag 153481
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>gb|AC108420.8| Mus musculus chromosome 7, clone RP23-38E14, complete sequence
          Length = 134825

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 70    ctggaggagagatgggggc 88
             |||||||||||||||||||
Sbjct: 89473 ctggaggagagatgggggc 89491
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>emb|AL161781.12| Human DNA sequence from clone RP11-297B17 on chromosome 9 Contains the 5'
              end of the PAX5 gene for paired box gene 5 (B-cell lineage
              specific activator protein) (BSAP), a ribosomal protein L32
              (RPL32) pseudogene and five CpG islands, complete sequence
          Length = 159096

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 69     gctggaggagagatggggg 87
              |||||||||||||||||||
Sbjct: 127220 gctggaggagagatggggg 127238
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>gb|AC158467.3| Mus musculus chromosome 3, clone RP23-116C1, complete sequence
          Length = 173252

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 161   ctcttcatcttgttcaggg 179
             |||||||||||||||||||
Sbjct: 37677 ctcttcatcttgttcaggg 37695
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>emb|AL022153.1|HS23K20 Human DNA sequence from clone RP1-23K20 on chromosome Xq25-26.2
             Contains the 5' end of the COVA1 gene for cytosolic
             ovarian carcinoma antigen 1, the 3' end of a novel gene
             and a CpG island, complete sequence
          Length = 126352

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    gagctggaggagagatggg 85
             |||||||||||||||||||
Sbjct: 49156 gagctggaggagagatggg 49138
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>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a
              novel gene, the Pafah1b1 gene for platelet-activating
              factor acetylhydrolase isoform 1b beta1 subunit, the 5' end
              of a novel gene and two CpG islands, complete sequence
          Length = 137908

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     ggagctggaggagagatgg 84
              |||||||||||||||||||
Sbjct: 123616 ggagctggaggagagatgg 123634
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>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis
          Length = 74787

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 87    gcgcggaggacgccatgcggctg 109
             |||||||||||| ||||||||||
Sbjct: 28343 gcgcggaggacggcatgcggctg 28365
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>gb|AC087889.15| Mus Musculus Strain C57BL6/J Chromosome 10 BAC, RP23-337L15, Complete
              Sequence, complete sequence
          Length = 215756

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     ttggaacttggagctggag 75
              |||||||||||||||||||
Sbjct: 135177 ttggaacttggagctggag 135195
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>gb|AC026975.5| Homo sapiens chromosome 11, clone RP11-709C9, complete sequence
          Length = 200105

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    atcctctcctaagagagac 28
             |||||||||||||||||||
Sbjct: 33009 atcctctcctaagagagac 33027
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>gb|AC092713.2| Homo sapiens chromosome 17, clone CTC-780D20, complete sequence
          Length = 142087

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 121   tcttccttgccttgcttct 139
             |||||||||||||||||||
Sbjct: 77802 tcttccttgccttgcttct 77784
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>gb|AC108156.4| Homo sapiens BAC clone RP11-563M4 from 4, complete sequence
          Length = 90361

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    ggagctggaggagagatgg 84
             |||||||||||||||||||
Sbjct: 54258 ggagctggaggagagatgg 54240
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>dbj|AK139366.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
          enriched library, clone:A830030G12 product:myelin
          transcription factor 1-like, full insert sequence
          Length = 666

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 2  ctccactcatcctctccta 20
          |||||||||||||||||||
Sbjct: 29 ctccactcatcctctccta 11
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>dbj|AK161574.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330420P05 product:hypothetical
           protein, full insert sequence
          Length = 1388

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 66  ggagctggaggagagatgg 84
           |||||||||||||||||||
Sbjct: 257 ggagctggaggagagatgg 275
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>gb|AC154373.2| Mus musculus BAC clone RP23-79I18 from chromosome 9, complete sequence
          Length = 225286

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   cttcttccttgccttgctt 137
             |||||||||||||||||||
Sbjct: 82771 cttcttccttgccttgctt 82753
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>gb|AC055716.24|AC055716 Homo sapiens 12 BAC RP11-641A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110819

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 158   ctcctcttcatcttgttca 176
             |||||||||||||||||||
Sbjct: 94614 ctcctcttcatcttgttca 94632
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>gb|BC056457.1| Mus musculus myelin transcription factor 1-like, mRNA (cDNA clone
           IMAGE:6814760)
          Length = 784

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 2   ctccactcatcctctccta 20
           |||||||||||||||||||
Sbjct: 118 ctccactcatcctctccta 100
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>gb|AC026955.10|AC026955 Homo sapiens chromosome 17, clone RP11-585D22, complete sequence
          Length = 176258

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 121    tcttccttgccttgcttct 139
              |||||||||||||||||||
Sbjct: 168465 tcttccttgccttgcttct 168447
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 1        actccactcatcctctcct 19
                |||||||||||||||||||
Sbjct: 14543425 actccactcatcctctcct 14543443
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>gb|AC097462.2| Homo sapiens BAC clone RP11-18O11 from 4, complete sequence
          Length = 180973

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 158   ctcctcttcatcttgttca 176
             |||||||||||||||||||
Sbjct: 72638 ctcctcttcatcttgttca 72656
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>gb|AC108059.6| Homo sapiens BAC clone RP11-398G9 from 2, complete sequence
          Length = 124950

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 117   ctcttcttccttgccttgc 135
             |||||||||||||||||||
Sbjct: 38322 ctcttcttccttgccttgc 38340
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>gb|AF260927.1|AF260927 Mus musculus D4Cole1e (D4Cole1e) gene, partial cds; peroxiredoxin
             V-like pseudogene, complete sequence; retinoid binding
             protein 7 (Rbp7) gene, complete cds; and ubiquitin fusion
             degradation protein 2 (Ufd2) gene, partial cds
          Length = 90497

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    ggagctggaggagagatgg 84
             |||||||||||||||||||
Sbjct: 41614 ggagctggaggagagatgg 41596
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>gb|AC010982.5| Homo sapiens BAC clone RP11-475I16 from 2, complete sequence
          Length = 217107

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     ggaacttggagctggagga 77
              |||||||||||||||||||
Sbjct: 115144 ggaacttggagctggagga 115126
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                              
Query: 28      cggacctggccgctgccattgcgctccactt 58
               |||||| ||||||| || |||||||||||||
Sbjct: 4173146 cggacccggccgcttccgttgcgctccactt 4173176
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>dbj|AP005783.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0095H08
          Length = 140777

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     actccactcatcctctcct 19
             |||||||||||||||||||
Sbjct: 56690 actccactcatcctctcct 56708
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>emb|AJ332926.1|HSA332926 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KL8R
          Length = 664

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 123 ttccttgccttgcttcttg 141
           |||||||||||||||||||
Sbjct: 494 ttccttgccttgcttcttg 512
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>gb|AF327433.1| Homo sapiens B-cell specific activator protein BSAP (PAX5) gene,
           partial exon 1B sequence
          Length = 6615

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  gctggaggagagatggggg 87
           |||||||||||||||||||
Sbjct: 117 gctggaggagagatggggg 135
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>emb|AL669843.4| Human DNA sequence from clone XXbac-33F23 on chromosome 6, complete
             sequence
          Length = 183384

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    ggaacttggagctggagga 77
             |||||||||||||||||||
Sbjct: 13089 ggaacttggagctggagga 13071
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>emb|CT025654.11| Mouse DNA sequence from clone RP24-345F16 on chromosome 12, complete
             sequence
          Length = 183766

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     ctccactcatcctctccta 20
             |||||||||||||||||||
Sbjct: 87443 ctccactcatcctctccta 87461
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>gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51 of 73 of the complete
              sequence
          Length = 316981

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     gctccacttggaacttgga 68
              |||||||||||||||||||
Sbjct: 143419 gctccacttggaacttgga 143401
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 38      cgctgccattgcgctccac 56
               |||||||||||||||||||
Sbjct: 3279481 cgctgccattgcgctccac 3279463
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>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete
             sequence
          Length = 228508

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 119   cttcttccttgccttgctt 137
             |||||||||||||||||||
Sbjct: 42317 cttcttccttgccttgctt 42335
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>gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, complete sequence
          Length = 233117

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 61     aacttggagctggaggaga 79
              |||||||||||||||||||
Sbjct: 198912 aacttggagctggaggaga 198930
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>emb|CT010437.15| Mouse DNA sequence from clone RP23-333O22 on chromosome 17, complete
              sequence
          Length = 172696

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     ggagctggaggagagatgg 84
              |||||||||||||||||||
Sbjct: 160190 ggagctggaggagagatgg 160172
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>emb|AL606973.29| Mouse DNA sequence from clone RP23-173D8 on chromosome 4, complete
              sequence
          Length = 243369

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 66     ggagctggaggagagatgg 84
              |||||||||||||||||||
Sbjct: 198134 ggagctggaggagagatgg 198152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,987,945
Number of Sequences: 3902068
Number of extensions: 1987945
Number of successful extensions: 157205
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156699
Number of HSP's gapped (non-prelim): 506
length of query: 186
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 164
effective length of database: 17,147,199,772
effective search space: 2812140762608
effective search space used: 2812140762608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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