>DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding|
           protein 1a) (DDB1a)
          Length = 1088

 Score =  235 bits (599), Expect = 5e-62
 Identities = 110/125 (88%), Positives = 118/125 (94%)
 Frame = +3

Query: 84  MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263
           MS+WNYVVTAHKPTSV+HSCVGNFT P +LNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1   MSSWNYVVTAHKPTSVTHSCVGNFTSPQELNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 264 RIATIELFRPHNEAQDFLFIATERYRFCVLQWDAEKSELLTRSMGDVSDRIGRPYGHGQI 443
           RIAT+ELFRPH EAQDFLFIATERY+FCVLQWD E SEL+TR+MGDVSDRIGRP  +GQI
Sbjct: 61  RIATLELFRPHGEAQDFLFIATERYKFCVLQWDPESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 444 GIIDP 458
           GIIDP
Sbjct: 121 GIIDP 125

>DDB1_LYCES (Q6QNU4) DNA damage binding protein 1 (UV-damaged DNA-binding|
           protein 1) (High pigmentation protein 1)
          Length = 1090

 Score =  230 bits (587), Expect = 1e-60
 Identities = 106/125 (84%), Positives = 116/125 (92%)
 Frame = +3

Query: 84  MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263
           MS WNYVVTAHKPT+V+HSCVGNFTGP +LNLI+AKCTRIEIHLLTPQGLQPMLDVPIYG
Sbjct: 1   MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG 60

Query: 264 RIATIELFRPHNEAQDFLFIATERYRFCVLQWDAEKSELLTRSMGDVSDRIGRPYGHGQI 443
           RIAT+ELFRPH E QD LFIATERY+FCVLQWD E SE++TR+MGDVSDRIGRP  +GQI
Sbjct: 61  RIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPTDNGQI 120

Query: 444 GIIDP 458
           GIIDP
Sbjct: 121 GIIDP 125

>DDB1_LYCCS (Q6E7D1) DNA damage binding protein 1 (UV-damaged DNA-binding|
           protein 1)
          Length = 1095

 Score =  224 bits (571), Expect = 8e-59
 Identities = 106/130 (81%), Positives = 116/130 (89%), Gaps = 5/130 (3%)
 Frame = +3

Query: 84  MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQ-----PMLD 248
           MS WNYVVTAHKPT+V+HSCVGNFTGP +LNLI+AKCTRIEIHLLTPQGLQ     PMLD
Sbjct: 1   MSVWNYVVTAHKPTNVTHSCVGNFTGPQELNLIIAKCTRIEIHLLTPQGLQCICLQPMLD 60

Query: 249 VPIYGRIATIELFRPHNEAQDFLFIATERYRFCVLQWDAEKSELLTRSMGDVSDRIGRPY 428
           VPIYGRIAT+ELFRPH E QD LFIATERY+FCVLQWD E SE++TR+MGDVSDRIGRP 
Sbjct: 61  VPIYGRIATLELFRPHGETQDLLFIATERYKFCVLQWDTEASEVITRAMGDVSDRIGRPT 120

Query: 429 GHGQIGIIDP 458
            +GQIGIIDP
Sbjct: 121 DNGQIGIIDP 130

>DDB1B_ARATH (O49552) DNA damage binding protein 1b (UV-damaged DNA-binding|
           protein 1b) (DDB1b)
          Length = 1088

 Score =  216 bits (550), Expect = 2e-56
 Identities = 101/125 (80%), Positives = 112/125 (89%)
 Frame = +3

Query: 84  MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263
           MS WNY VTA KPT V+HSCVGNFT P +LNLIVAK TRIEIHLL+PQGLQ +LDVP+YG
Sbjct: 1   MSVWNYAVTAQKPTCVTHSCVGNFTSPQELNLIVAKSTRIEIHLLSPQGLQTILDVPLYG 60

Query: 264 RIATIELFRPHNEAQDFLFIATERYRFCVLQWDAEKSELLTRSMGDVSDRIGRPYGHGQI 443
           RIAT+ELFRPH EAQDFLF+ATERY+FCVLQWD E SEL+TR+MGDVSDRIGRP  +GQI
Sbjct: 61  RIATMELFRPHGEAQDFLFVATERYKFCVLQWDYESSELITRAMGDVSDRIGRPTDNGQI 120

Query: 444 GIIDP 458
           GIIDP
Sbjct: 121 GIIDP 125

>DDB1_HUMAN (Q16531) DNA damage-binding protein 1 (Damage-specific DNA-binding|
           protein 1) (UV-damaged DNA-binding factor) (DDB p127
           subunit) (DDBa) (UV-damaged DNA-binding protein 1)
           (UV-DDB 1) (Xeroderma pigmentosum group E-complementing
           protein) (XPCe)
          Length = 1140

 Score =  132 bits (331), Expect = 6e-31
 Identities = 63/125 (50%), Positives = 92/125 (73%), Gaps = 2/125 (1%)
 Frame = +3

Query: 90  TWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRI 269
           ++NYVVTA KPT+V+    G+FT    LNL++AK TR+EI+++T +GL+P+ +V +YG+I
Sbjct: 2   SYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKI 61

Query: 270 ATIELFRPHNEAQDFLFIATERYRFCVLQW--DAEKSELLTRSMGDVSDRIGRPYGHGQI 443
           A +ELFRP  E++D LFI T +Y  C+L++    E  +++TR+ G+V DRIGRP   G I
Sbjct: 62  AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 444 GIIDP 458
           GIIDP
Sbjct: 122 GIIDP 126

>DDB1_CERAE (P33194) DNA damage-binding protein 1 (Damage-specific DNA-binding|
           protein 1) (DDB p127 subunit) (DDBa) (UV-damaged
           DNA-binding protein 1) (UV-DDB 1)
          Length = 1140

 Score =  129 bits (325), Expect = 3e-30
 Identities = 62/125 (49%), Positives = 91/125 (72%), Gaps = 2/125 (1%)
 Frame = +3

Query: 90  TWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRI 269
           ++NYVVTA KPT+V+     +FT    LNL++AK TR+EI+++T +GL+P+ +V +YG+I
Sbjct: 2   SYNYVVTAQKPTAVNGCVTAHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKI 61

Query: 270 ATIELFRPHNEAQDFLFIATERYRFCVLQW--DAEKSELLTRSMGDVSDRIGRPYGHGQI 443
           A +ELFRP  E++D LFI T +Y  C+L++    E  +++TR+ G+V DRIGRP   G I
Sbjct: 62  AVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGII 121

Query: 444 GIIDP 458
           GIIDP
Sbjct: 122 GIIDP 126

>DDB1_SCHPO (O13807) DNA damage-binding protein 1 (Damage-specific DNA-binding|
           protein 1)
          Length = 1072

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +3

Query: 99  YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYGRIATI 278
           YV   HKP+S+ ++    F      N+IVAK   +E++      L  +    I+ +I  +
Sbjct: 3   YVTYLHKPSSIRNAVFCKFVNASSWNVIVAKVNCLEVYSYENNRLCLITSANIFAKIVNV 62

Query: 279 ELFRPHNEAQDFLFIATERYRFCVLQWDAEKSELLTR-SMGDVSDRIGRPYGHGQIGIID 455
           + F+P +   D + +AT+ +R+  L WDA  + +     + D S+R  R    G + ++D
Sbjct: 63  KAFKPVSSPTDHIIVATDSFRYFTLFWDANDNTVSNGIKIQDCSERSLRESQSGPLLLVD 122

Query: 456 P 458
           P
Sbjct: 123 P 123

>RSE1_ASPFU (Q4WLI5) Pre-mRNA-splicing factor rse1|
          Length = 1225

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 22/89 (24%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = +3

Query: 99  YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272
           Y +T   PT+++ + +G F G  +  ++ A  +++ IH   P QG + P+    ++G I 
Sbjct: 10  YSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIYSQDVFGIIR 69

Query: 273 TIELFRPHNEAQDFLFIATERYRFCVLQW 359
           T+  FR    ++D++ I ++  R  ++++
Sbjct: 70  TLAAFRLAGSSKDYIIIGSDSGRITIIEY 98

>RSE1_EMENI (Q5B1X8) Pre-mRNA-splicing factor rse1|
          Length = 1226

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +3

Query: 99  YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272
           Y +T   PT+++ + +G F G  +  ++ A  +++ IH   P QG + P+    ++G I 
Sbjct: 10  YSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVIPLYTQDVFGIIR 69

Query: 273 TIELFRPHNEAQDFLFIATERYRFCVLQW 359
           T+  FR     +D++ I ++  R  ++++
Sbjct: 70  TLAAFRLAGSNKDYIIIGSDSGRITIIEY 98

>RSE1_USTMA (Q4PGM6) Pre-mRNA-splicing factor RSE1|
          Length = 1221

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
 Frame = +3

Query: 99  YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPI----YGR 266
           Y +T     SV+ + VG F+G  Q  +IVAK +R+E  LL P      +D  +    +G 
Sbjct: 7   YNLTLQASGSVNATVVGQFSGTRQQEIIVAKGSRLE--LLRPDTQTGKVDTVLSHDAFGV 64

Query: 267 IATIELFRPHNEAQDFLFIATERYRFCVLQWDAEKSEL 380
           I ++  FR    ++D++ + ++  R  +L++  + + L
Sbjct: 65  IRSLAAFRLTGGSKDYVIVGSDSGRIVILEYQPKTNSL 102

>RSE1_NEUCR (Q7RYR4) Pre-mRNA-splicing factor rse-1|
          Length = 1271

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +3

Query: 99  YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272
           Y +T   PT+V+ + +G F+G  +  ++ A  +R+ +    P QG +  +L   I+G + 
Sbjct: 10  YSLTIQPPTAVTQALLGQFSGTKEQQILTASGSRLTLLQPDPRQGKVNTLLSHDIFGIVR 69

Query: 273 TIELFRPHNEAQDFLFIATERYRFCVLQW 359
            I  FR     +D++ +AT+  R  ++++
Sbjct: 70  AIASFRLAGSHKDYIILATDSGRITIIEY 98

>RSE1_MAGGR (Q52E49) Pre-mRNA-splicing factor RSE1|
          Length = 1229

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/89 (22%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
 Frame = +3

Query: 99  YVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTP-QG-LQPMLDVPIYGRIA 272
           Y ++   P++++ + +G F+G  +  ++ A  +R+ ++   P QG + P++   ++G I 
Sbjct: 10  YSLSIQPPSTITRAILGQFSGTKEQQIVAASGSRLTLYRPDPTQGKVVPLMSHDVFGIIR 69

Query: 273 TIELFRPHNEAQDFLFIATERYRFCVLQW 359
            +  FR    ++D+L IA++  R  ++++
Sbjct: 70  DLASFRLAGSSKDYLIIASDSGRITIVEY 98

>RSE1_CRYNE (Q5KP25) Pre-mRNA-splicing factor RSE1|
          Length = 1217

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
 Frame = +3

Query: 105 VTAHKPTSVSHSCVGNFTG-PHQLNLIVAKCTRIEIHLL--TPQGLQPMLDVPIYGRIAT 275
           +T   PT+VS + VG+F+G   Q  L V   T++EI  L  T   L  ++    +G I  
Sbjct: 6   LTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAFGTIRN 65

Query: 276 IELFRPHNEAQDFLFIATERYRFCVLQWDAEKSELLTRSMGDVSDRIG-RPYGHGQIGII 452
           I  FR     +D++   ++  R  +L++    +        +V  + G R    GQ   +
Sbjct: 66  IAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESLYQEVFGKSGSRRIVPGQFLAV 125

Query: 453 DP 458
           DP
Sbjct: 126 DP 127

>RIK1_SCHPO (Q10426) Silencing protein rik1|
          Length = 1040

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +3

Query: 177 LIVAKCTRIEIHLLTP-QGLQPMLDVPIYGRIATIELFRPHNEAQDFLFIATERYRFCVL 353
           L++ +  +I I+L +   GLQ    +P++  +  I  +RP    +D+LF+      +  +
Sbjct: 28  LVLLQALKINIYLCSEVHGLQFFTSIPLFSTVKHIRPYRPPGLDRDYLFVVLNDDTYFSI 87

Query: 354 QWDAEKSELL 383
            WD +  +++
Sbjct: 88  YWDEDYQKVI 97

>Y066_METJA (Q60377) Hypothetical protein MJ0066|
          Length = 480

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = -2

Query: 440 LSMSVRAADAIRNISHGSSEKL*FFCVPLQDAEPVPLRGNEEEVLGLIVRAEE--LDRRD 267
           + ++V +++ I+N+  G   K+ FF    +D +P  +  N EE   L+VRA E  +D  +
Sbjct: 181 VGLAVVSSEDIKNMEKGKVVKVRFFIKDNEDYKPGKIYDNLEEAFDLMVRANEGVIDNYE 240

Query: 266 PPIYGHVQHRLEALRR 219
               G +++  E +++
Sbjct: 241 RNAIGFIKNTYEKIKK 256

>CLPB_CHLPN (Q7AJA9) Chaperone clpB|
          Length = 866

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -2

Query: 341 PVPLRGNEEEVLGLIVRAEELDRRDPPIYGH----VQHRLEALRREEVDLDAG 195
           P+P+   E E+  LIV+ E + R   P Y      +Q  ++ALR E   L  G
Sbjct: 408 PLPIDEKERELAALIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLG 460

>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2365

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 353  QDAEPVPLRGNEEEVLGLIVRAEELDRRDPPIYGH--VQHRLEALRRE 216
            Q+ E +PLR N+   L  ++     +RR PP  GH  ++  ++ALR +
Sbjct: 2031 QELEKLPLRENKRVPLTALLNQSRGERRGPPSDGHEALEKEVQALRAQ 2078

>YR648_MIMIV (Q5UR09) Hypothetical protein R648|
          Length = 400

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
 Frame = +3

Query: 96  NYVVTAHKPTSVSHSCVGNFTGPH----QLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG 263
           N    +  PT ++ +C GNF   +    +  L +       +H   PQ + P++   +  
Sbjct: 135 NIAQNSSYPTGIAINCTGNFATTNGTLTKSGLFLTCSEHGTVHSYNPQ-VDPLVSFLVLN 193

Query: 264 RIAT--IELFRPHNEAQDFLFIATERYRFCVLQWDAEKSELLTRSM--GDVSDRIGRPYG 431
              T  I +FR    A D L++A + ++  ++ +D+  + LL      GD SD I   YG
Sbjct: 194 EQLTGEIHVFRGLAVAGDVLYLA-DFFQSKIMVFDSNYNRLLGFPFVDGDTSDPIPISYG 252

>RAD5_EMENI (Q5BHD6) DNA repair protein rad5 (EC 3.6.1.-)|
          Length = 1202

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
 Frame = +1

Query: 277  SSSSALTMRPRT--SSSLPRRGT--------GSASCSGTQKNQSFSLDPWEMFLIASAAL 426
            S+ S LT  P+T   SS P   T        G    + T  +  F +DPW  F I + A+
Sbjct: 1078 SAPSGLTPTPKTPKQSSSPSSPTVLLISLKAGGVGLNLTAASNVFMMDPWWSFAIEAQAI 1137

Query: 427  TDMDRLG 447
              + R+G
Sbjct: 1138 DRVHRMG 1144

>CLPB_PARUW (Q6MD97) Chaperone clpB|
          Length = 868

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 347 AEPVPLRGNEEEVLGLIVRAEELDRRDPPIYGHVQHRLE 231
           + P+P+   E E+ GLIV  E + R   P+  +   +LE
Sbjct: 407 SRPLPIDNKERELAGLIVEQEAMKRESTPLAKNEVEKLE 445

>PKHD1_HUMAN (Q8TCZ9) Polycystic kidney and hepatic disease 1 precursor|
           (Fibrocystin) (Polyductin) (Tigmin)
          Length = 4074

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 362 VPLQDAEPVPLRGNEEEVLGLIVRAEELDRRDPPIYGHVQHRL 234
           +PL  A  VP  G EE    ++V  +   R  PP+ GH + +L
Sbjct: 754 LPLITARSVPTEGTEEGSGLVLVTTQRRQRTSPPLGGHFRIQL 796

>FCMD_HUMAN (O75072) Fukutin (EC 2.-.-.-) (Fukuyama-type congenital muscular|
           dystrophy protein)
          Length = 461

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 455 VDDPNLSMSVRAADAIRNISHGSSEKL*FFCVP 357
           +D   L +  +  + ++N SHGS+ +  FFCVP
Sbjct: 75  IDPLILELINKNFEQVKNTSHGSTSQCKFFCVP 107

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = +1

Query: 247 TCPYMGGSRRSSSSALTMRPRTSSSLPRRGTGSASCSGTQKNQSFSLDPWEMFLIASAAL 426
           T  Y   +  +SSS+LT     SSSL    T S+S + +  N + S  P    L +S+A 
Sbjct: 60  TTSYNYNTSSASSSSLTSSSAASSSL----TSSSSLASSSTNSTTSASPTSSSLTSSSA- 114

Query: 427 TDMDRLGSST 456
           T      SST
Sbjct: 115 TSSSLASSST 124

>GPDA_TROW8 (Q83I37) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 325

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -2

Query: 452 DDPNLSMSVRAADAIRNISHGSSEKL*FFCVPLQDAEPVPLRGNEEEVLGLI 297
           D+P++S+   A  A  NI  G+ +   F+C+P  D + V +    + ++ LI
Sbjct: 148 DEPSVSVVASANIATANIVAGTLKCPGFYCIPSSDIKGVEICAASKNLVALI 199

>GPDA_TROWT (Q83G27) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 339

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -2

Query: 452 DDPNLSMSVRAADAIRNISHGSSEKL*FFCVPLQDAEPVPLRGNEEEVLGLI 297
           D+P++S+   A  A  NI  G+ +   F+C+P  D + V +    + ++ LI
Sbjct: 162 DEPSVSVVASANIATANIVAGTLKCPGFYCIPSSDIKGVEICAASKNLVALI 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.126    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,410,509
Number of Sequences: 219361
Number of extensions: 1021818
Number of successful extensions: 3714
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3669
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)