ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 5e-50
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 170 3e-39
3gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 170 3e-39
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
5gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, ... 111 2e-21
6ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA 84 5e-13
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
8dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
9dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
11dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
13emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 60 7e-06
14ref|NM_120729.2| Arabidopsis thaliana ATUBA2; ubiquitin activati... 52 0.002
15dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
16dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.002
17gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
18emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 52 0.002
19emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 52 0.002
20gb|U40566.1|ATU40566 Arabidopsis thaliana ubiquitin activating e... 52 0.002
21dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.11
22gb|AC008804.7| Homo sapiens chromosome 5 clone CTD-2085F10, comp... 44 0.42
23gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (U... 44 0.42
24gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, ... 44 0.42
25gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, compl... 40 6.5
26ref|XM_468091.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
27ref|XM_591672.2| PREDICTED: Bos taurus similar to sarcalumenin (... 40 6.5
28gb|AC124680.10| Mus musculus chromosome 14, clone RP23-383A19, c... 40 6.5
29gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.5
30emb|AL139141.23| Human DNA sequence from clone RP5-1180C10 on ch... 40 6.5
31gb|AC016255.24| Homo sapiens 3 BAC RP11-883M5 (Roswell Park Canc... 40 6.5
32emb|Y10804.1|NTUAEE1 N.tabaccum mRNA for ubiquitin activating en... 40 6.5
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
35gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.5
36dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
37dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
38dbj|AK121728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
39dbj|AK106527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
40gb|AY108693.1| Zea mays PCO078930 mRNA sequence 40 6.5
41gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, comp... 40 6.5
42emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on ch... 40 6.5
43gb|U46014.1|SSU46014 Saccharum sp. polyphenol oxidase mRNA, comp... 40 6.5 
>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full
           insert sequence
          Length = 3682

 Score =  206 bits (104), Expect = 5e-50
 Identities = 175/196 (89%), Gaps = 2/196 (1%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 363 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 422

                                                                       
Query: 340 gatgcggctgctttttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 399
           |||||||| ||| || ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 423 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 482

                                                                       
Query: 400 gacagcaaagaatcttgctctggcgggtgttaaatctgtcacccta-atgatgt-agaaa 457
           ||  || |||||||||||| | ||||||||||| ||| |||||||| ||||| |  ||||
Sbjct: 483 gattgcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaa 542

                           
Query: 458 tgtggatatgtgggac 473
           |||||| |||||||||
Sbjct: 543 tgtggaaatgtgggac 558



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Plus

                                                                       
Query: 126 cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 179
           ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 197 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 256

                                                        
Query: 180 cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 224
           || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 257 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 301
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                            
Query: 280      ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
                ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 10276954 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 10276895

                                                                            
Query: 340      gatgcggctgctttttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 399
                |||||||| ||| || ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 10276894 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 10276835

                  
Query: 400      ga 401
                ||
Sbjct: 10276834 ga 10276833



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Minus

                                                                            
Query: 126      cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 179
                ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 10277120 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 10277061

                                                             
Query: 180      cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 224
                || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 10277060 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 10277016



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 65/75 (86%), Gaps = 2/75 (2%)
 Strand = Plus / Minus

                                                                            
Query: 401      acagcaaagaatcttgctctggcgggtgttaaatctgtcacccta-atgatgt-agaaat 458
                ||||| |||||||||||| | ||||||||||| ||| |||||||| ||||| |  |||||
Sbjct: 10275732 acagcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaat 10275673

                               
Query: 459      gtggatatgtgggac 473
                ||||| |||||||||
Sbjct: 10275672 gtggaaatgtgggac 10275658
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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                          
Query: 280    ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
              ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 138367 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 138308

                                                                          
Query: 340    gatgcggctgctttttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 399
              |||||||| ||| || ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 138307 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 138248

                
Query: 400    ga 401
              ||
Sbjct: 138247 ga 138246



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Minus

                                                                          
Query: 126    cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 179
              ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 138533 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 138474

                                                           
Query: 180    cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 224
              || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 138473 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 138429



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 65/75 (86%), Gaps = 2/75 (2%)
 Strand = Plus / Minus

                                                                          
Query: 401    acagcaaagaatcttgctctggcgggtgttaaatctgtcacccta-atgatgt-agaaat 458
              ||||| |||||||||||| | ||||||||||| ||| |||||||| ||||| |  |||||
Sbjct: 137145 acagcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaat 137086

                             
Query: 459    gtggatatgtgggac 473
              ||||| |||||||||
Sbjct: 137085 gtggaaatgtgggac 137071
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  170 bits (86), Expect = 3e-39
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                            
Query: 280      ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
                ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 10275055 ggtggcggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagac 10274996

                                                                            
Query: 340      gatgcggctgctttttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctga 399
                |||||||| ||| || ||||||||||| |||||||||||  | |||||||||||||||||
Sbjct: 10274995 gatgcggcggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctga 10274936

                  
Query: 400      ga 401
                ||
Sbjct: 10274935 ga 10274934



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%), Gaps = 6/105 (5%)
 Strand = Plus / Minus

                                                                            
Query: 126      cgcgctatatgcttccgacgaagagagcggacggcgctgagg------acagcggcgacg 179
                ||||||||||||||||||||||||||||| ||||||||||||       |||| ||||||
Sbjct: 10275221 cgcgctatatgcttccgacgaagagagcgaacggcgctgaggctgagagcagcagcgacg 10275162

                                                             
Query: 180      cggcggcgaagaaggctcgggtaggggaatcggcggctgaggcgg 224
                || ||||||||||||| |||||||||| ||||||| | |||||||
Sbjct: 10275161 cgccggcgaagaaggcgcgggtaggggcatcggcgtcggaggcgg 10275117



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 65/75 (86%), Gaps = 2/75 (2%)
 Strand = Plus / Minus

                                                                            
Query: 401      acagcaaagaatcttgctctggcgggtgttaaatctgtcacccta-atgatgt-agaaat 458
                ||||| |||||||||||| | ||||||||||| ||| |||||||| ||||| |  |||||
Sbjct: 10273833 acagcgaagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaat 10273774

                               
Query: 459      gtggatatgtgggac 473
                ||||| |||||||||
Sbjct: 10273773 gtggaaatgtgggac 10273759
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>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3588

 Score =  111 bits (56), Expect = 2e-21
 Identities = 113/132 (85%)
 Strand = Plus / Plus

                                                                       
Query: 286 ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagacgatgcg 345
           ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 317 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 376

                                                                       
Query: 346 gctgctttttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctgagacagc 405
            |  || || || ||| |||| |||||||||||  | ||||||||||| || || |  ||
Sbjct: 377 ccgcctcttcgcctccgacgtcctcgtctccgggctcaacgggcttggcgccgaaattgc 436

                       
Query: 406 aaagaatcttgc 417
           ||||||||||||
Sbjct: 437 aaagaatcttgc 448
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>ref|NM_185567.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3522

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
           |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 324 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 383

                 
Query: 340 gatgcg 345
            |||||
Sbjct: 384 catgcg 389
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                            
Query: 280      ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
                |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 29425626 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 29425685

                      
Query: 340      gatgcg 345
                 |||||
Sbjct: 29425686 catgcg 29425691
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>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full
           insert sequence
          Length = 3522

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                       
Query: 280 ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
           |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 324 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 383

                 
Query: 340 gatgcg 345
            |||||
Sbjct: 384 catgcg 389
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 280   ggtggcggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagac 339
             |||| ||||||| || |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 88548 ggtgccggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagac 88607

                   
Query: 340   gatgcg 345
              |||||
Sbjct: 88608 catgcg 88613
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 287    gagatcgatgaggaccttcacagcaggcagctcgccgt 324
              |||||||||||||||||||||||| | |||||||||||
Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgt 317100
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>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
           insert sequence
          Length = 3724

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 287 gagatcgatgaggaccttcacagcaggcagctcgccgt 324
           |||||||||||||||||||||||| | |||||||||||
Sbjct: 438 gagatcgatgaggaccttcacagccgccagctcgccgt 475
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 287    gagatcgatgaggaccttcacagcaggcagctcgccgt 324
              |||||||||||||||||||||||| | |||||||||||
Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgt 317100
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 287   gagatcgatgaggaccttcacagcaggcagctcgccgt 324
             |||||||||||||||||||||||| | |||||||||||
Sbjct: 50188 gagatcgatgaggaccttcacagccgccagctcgccgt 50151
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>ref|NM_120729.2| Arabidopsis thaliana ATUBA2; ubiquitin activating enzyme AT5G06460
           (ATUBA2) mRNA, complete cds
          Length = 3379

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 286 ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagacgatgcg 345
           |||||||||||| || ||||| ||||| ||||||||||| |||||  | ||||| ||| |
Sbjct: 204 ggagatcgatgaagatcttcatagcagacagctcgccgtttacggccgtgagactatgag 263

                                         
Query: 346 gctgctttttgcgtccaacgtgctcgtctc 375
           |  |||||| || |||||||| ||| ||||
Sbjct: 264 gaagcttttcgcttccaacgttctcatctc 293
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 287    gagatcgatgaggaccttcacagcaggcagctcgccgt 324
              ||||||||||||||||| |||||| | |||||||||||
Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgt 300135
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>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15
          Length = 83865

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                         
Query: 286   ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagacgatgcg 345
             |||||||||||| || ||||| ||||| ||||||||||| |||||  | ||||| ||| |
Sbjct: 78910 ggagatcgatgaagatcttcatagcagacagctcgccgtttacggccgtgagactatgag 78969

                                           
Query: 346   gctgctttttgcgtccaacgtgctcgtctc 375
             |  |||||| || |||||||| ||| ||||
Sbjct: 78970 gaagcttttcgcttccaacgttctcatctc 78999
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 287    gagatcgatgaggaccttcacagcaggcagctcgccgt 324
              ||||||||||||||||| |||||| | |||||||||||
Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgt 300135
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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 287  gagatcgatgaggaccttcacagcaggcagctcgccgt 324
            ||||||||||||||||| |||||| | |||||||||||
Sbjct: 4821 gagatcgatgaggacctccacagccgccagctcgccgt 4858
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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 287  gagatcgatgaggaccttcacagcaggcagctcgccgt 324
            ||||||||||||||||| |||||| | |||||||||||
Sbjct: 7490 gagatcgatgaggacctccacagccgccagctcgccgt 7453
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>gb|U40566.1|ATU40566 Arabidopsis thaliana ubiquitin activating enzyme 2 (UBA2) gene,
           complete cds
          Length = 4000

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 286 ggagatcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagacgatgcg 345
           |||||||||||| || ||||| ||||| ||||||||||| |||||  | ||||| ||| |
Sbjct: 617 ggagatcgatgaagatcttcatagcagacagctcgccgtttacggccgtgagactatgag 676

                                         
Query: 346 gctgctttttgcgtccaacgtgctcgtctc 375
           |  |||||| || |||||||| ||| ||||
Sbjct: 677 gaagcttttcgcttccaacgttctcatctc 706
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 167     gacagcggcgacgcggcggcgaa 189
               |||||||||||||||||||||||
Sbjct: 4134804 gacagcggcgacgcggcggcgaa 4134782
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>gb|AC008804.7| Homo sapiens chromosome 5 clone CTD-2085F10, complete sequence
          Length = 133476

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 446   atgatgtagaaatgtggatatg 467
             ||||||||||||||||||||||
Sbjct: 70127 atgatgtagaaatgtggatatg 70148
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>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 287 gagatcgatgaggaccttcacagcaggcagctcgccgt 324
           |||||||| |||||||| |||||| | |||||||||||
Sbjct: 306 gagatcgacgaggacctgcacagccgccagctcgccgt 343
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>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 287 gagatcgatgaggaccttcacagcaggcagctcgccgt 324
           |||||||| |||||||| |||||| | |||||||||||
Sbjct: 401 gagatcgacgaggacctgcacagccgccagctcgccgt 438
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>gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, complete sequence
          Length = 40909

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 172   cggcgacgcggcggcgaagaaggc 195
             ||||||||||||||| ||||||||
Sbjct: 16297 cggcgacgcggcggcaaagaaggc 16320
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>ref|XM_468091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2653

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 cggcgacgcggcggcgaaga 191
           ||||||||||||||||||||
Sbjct: 130 cggcgacgcggcggcgaaga 111
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>ref|XM_591672.2| PREDICTED: Bos taurus similar to sarcalumenin (LOC513912), mRNA
          Length = 1956

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 164 gaggacagcggcgacgcggc 183
           ||||||||||||||||||||
Sbjct: 526 gaggacagcggcgacgcggc 545
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>gb|AC124680.10| Mus musculus chromosome 14, clone RP23-383A19, complete sequence
          Length = 202809

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   agaaatgtggatatgtggga 472
             ||||||||||||||||||||
Sbjct: 53544 agaaatgtggatatgtggga 53525
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 174     gcgacgcggcggcgaagaag 193
               ||||||||||||||||||||
Sbjct: 3679281 gcgacgcggcggcgaagaag 3679262
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>emb|AL139141.23| Human DNA sequence from clone RP5-1180C10 on chromosome 1q24.1-24.3
            Contains the LHX4 gene for LIM homeobox 4, a novel gene
            (FLJ38931), the 3' end of the ACBD6 gene for
            acyl-Coenzyme A binding domain containing 6 and a CpG
            island, complete sequence
          Length = 113808

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  gcccgcaccgggggccgcgc 130
            ||||||||||||||||||||
Sbjct: 9164 gcccgcaccgggggccgcgc 9145
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>gb|AC016255.24| Homo sapiens 3 BAC RP11-883M5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 84112

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   ctgagacagcaaagaatctt 415
             ||||||||||||||||||||
Sbjct: 39021 ctgagacagcaaagaatctt 39040
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>emb|Y10804.1|NTUAEE1 N.tabaccum mRNA for ubiquitin activating enzyme E1
          Length = 3559

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 110/140 (78%)
 Strand = Plus / Plus

                                                                       
Query: 290 atcgatgaggaccttcacagcaggcagctcgccgtgtacgggagggagacgatgcggctg 349
           ||||||||||| ||||||||| | || |||||||| || ||  | || || ||||| |  
Sbjct: 323 atcgatgaggatcttcacagccgtcaactcgccgtttatggccgtgaaactatgcgtcga 382

                                                                       
Query: 350 ctttttgcgtccaacgtgctcgtctccggcttaaacgggcttggggctgagacagcaaag 409
           |||||||| || || || |||||||| |||||  | || ||||| ||||| |  ||||||
Sbjct: 383 ctttttgcatctaatgttctcgtctctggcttgcaaggccttggcgctgaaatcgcaaag 442

                               
Query: 410 aatcttgctctggcgggtgt 429
           ||||||  ||| ||||||||
Sbjct: 443 aatcttattcttgcgggtgt 462
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      acagcggcgacgcggcggcg 187
                ||||||||||||||||||||
Sbjct: 15610155 acagcggcgacgcggcggcg 15610136



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      acagcggcgacgcggcggcg 187
                ||||||||||||||||||||
Sbjct: 15610120 acagcggcgacgcggcggcg 15610101
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 172      cggcgacgcggcggcgaaga 191
                ||||||||||||||||||||
Sbjct: 33006210 cggcgacgcggcggcgaaga 33006229
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 18      ccggcttcgcccccaagccg 37
               ||||||||||||||||||||
Sbjct: 1852975 ccggcttcgcccccaagccg 1852994
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>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   cggcgacgcggcggcgaaga 191
             ||||||||||||||||||||
Sbjct: 52150 cggcgacgcggcggcgaaga 52169
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>dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0633D04
          Length = 159636

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   acagcggcgacgcggcggcg 187
             ||||||||||||||||||||
Sbjct: 99488 acagcggcgacgcggcggcg 99469



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   acagcggcgacgcggcggcg 187
             ||||||||||||||||||||
Sbjct: 99453 acagcggcgacgcggcggcg 99434
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>dbj|AK121728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C22, full
           insert sequence
          Length = 2653

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 cggcgacgcggcggcgaaga 191
           ||||||||||||||||||||
Sbjct: 130 cggcgacgcggcggcgaaga 111
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>dbj|AK106527.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F01, full
           insert sequence
          Length = 2648

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 cggcgacgcggcggcgaaga 191
           ||||||||||||||||||||
Sbjct: 33  cggcgacgcggcggcgaaga 14
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>gb|AY108693.1| Zea mays PCO078930 mRNA sequence
          Length = 735

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 gcggcgacgcggcggcgaag 190
           ||||||||||||||||||||
Sbjct: 301 gcggcgacgcggcggcgaag 320
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>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence
          Length = 162554

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 241    tgccggggagacggttggcggggg 264
              |||||||||||||| |||||||||
Sbjct: 126863 tgccggggagacgggtggcggggg 126886
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>emb|AL808133.17| Mouse DNA sequence from clone RP23-457N24 on chromosome X, complete
            sequence
          Length = 170192

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  gacagcaaagaatcttgctc 419
            ||||||||||||||||||||
Sbjct: 5588 gacagcaaagaatcttgctc 5569
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>gb|U46014.1|SSU46014 Saccharum sp. polyphenol oxidase mRNA, complete cds
          Length = 2209

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 165  aggacagcggcgacgcggcggcga 188
            |||||||||||| |||||||||||
Sbjct: 1468 aggacagcggcggcgcggcggcga 1491


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,817,430
Number of Sequences: 3902068
Number of extensions: 2817430
Number of successful extensions: 57563
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 56778
Number of HSP's gapped (non-prelim): 785
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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