ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016251.1| Zea mays clone Contig84 mRNA sequence 58 3e-05
2gb|AY104505.1| Zea mays PCO140706 mRNA sequence 58 3e-05
3emb|X60173.1|HVNAR7 Hordeum vulgare nar7 gene for NAD(P)H-bispec... 46 0.10
4gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's H... 44 0.40
5ref|XM_464032.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
6ref|NM_000812.2| Homo sapiens gamma-aminobutyric acid (GABA) A r... 42 1.6
7gb|U63963.1|HSU63963 Homo sapiens CSF-1 receptor (FMS) gene, com... 42 1.6
8gb|AF172282.1| Oryza sativa adh1-adh2 region 42 1.6
9gb|BT017415.1| Zea mays clone EL01N0331H10.c mRNA sequence 42 1.6
10gb|AY349423.1| Sus scrofa complement C4 mRNA, partial cds 42 1.6
11gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 42 1.6
12gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
13gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
14gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
15emb|X14767.1|HSGABAAB1 Human mRNA for GABA-A receptor, beta 1 su... 42 1.6
16emb|X03663.1|HSCFMS Human mRNA for c-fms proto-oncogene 42 1.6
17gb|BC047521.1| Homo sapiens colony stimulating factor 1 receptor... 42 1.6
18gb|BC022449.1| Homo sapiens gamma-aminobutyric acid (GABA) A rec... 42 1.6
19emb|CR614851.1| full-length cDNA clone CS0DF033YM17 of Fetal bra... 42 1.6
20gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica culti... 42 1.6
21gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, comple... 42 1.6
22gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.6
23ref|NM_005211.2| Homo sapiens colony stimulating factor 1 recept... 42 1.6
24gb|AC011382.4| Homo sapiens chromosome 5 clone CTB-13H5, complet... 42 1.6
25dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28ref|XM_234082.3| PREDICTED: Rattus norvegicus similar to homeodo... 42 1.6
29dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
30emb|BX648599.1|HSM808750 Homo sapiens mRNA; cDNA DKFZp686G20209 ... 42 1.6
31gb|AY890719.1| Synthetic construct Homo sapiens clone FLH147935.... 42 1.6
32dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
33dbj|AK108331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
34dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
35dbj|AK071323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
36emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.6
37dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
38emb|AL773560.9| Pig DNA sequence from clone XX-514B12, complete ... 42 1.6
39gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
41dbj|AB208819.1| Homo sapiens mRNA for colony stimulating factor ... 42 1.6
42ref|XM_476367.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
43gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
44ref|XM_823644.1| Trypanosoma brucei TREU927 3-methylcrotonoyl-Co... 40 6.2
45gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
46emb|X56011.1|TAPERO Wheat mRNA for peroxidase 40 6.2
47emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle heavy c... 40 6.2
48dbj|AK147430.1| Mus musculus 14 days pregnant adult female place... 40 6.2
49dbj|AK147407.1| Mus musculus 14 days pregnant adult female place... 40 6.2
50dbj|AK147296.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 6.2
51dbj|AK147235.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 6.2
52dbj|AK147233.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 6.2
53dbj|AK147223.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 6.2
54dbj|AK147222.1| Mus musculus 15 days pregnant adult female amnio... 40 6.2
55dbj|AK147221.1| Mus musculus 16 days embryo whole body cDNA, RIK... 40 6.2
56dbj|AK147216.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 6.2
57dbj|AK147215.1| Mus musculus 15 days embryo liver cDNA, RIKEN fu... 40 6.2
58dbj|AK147211.1| Mus musculus 15 days embryo liver cDNA, RIKEN fu... 40 6.2
59dbj|AK147210.1| Mus musculus 15 days embryo liver cDNA, RIKEN fu... 40 6.2
60dbj|AK147209.1| Mus musculus 15 days pregnant adult female place... 40 6.2
61dbj|AK147208.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 6.2
62dbj|AK147206.1| Mus musculus 15 days pregnant adult female amnio... 40 6.2
63dbj|AK147203.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 6.2
64dbj|AK165379.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 40 6.2
65gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.2
66dbj|AK083071.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 40 6.2
67dbj|AK053221.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 40 6.2
68dbj|AK040822.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 6.2
69dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
70dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
71ref|NM_181327.2| Mus musculus myosin, heavy polypeptide 9, non-m... 40 6.2
72ref|NM_022410.1| Mus musculus myosin, heavy polypeptide 9, non-m... 40 6.2
73dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.2
74dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
75dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
76dbj|AK108824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
77dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
78dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
79gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 6.2
80dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.2 
>gb|BT016251.1| Zea mays clone Contig84 mRNA sequence
          Length = 943

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 165 aaggtgacggtgcagaacctgtgcggccacgac 197
           |||||||||||||||||||||||| ||||||||
Sbjct: 184 aaggtgacggtgcagaacctgtgcagccacgac 216



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 408 gtctccgtcaccccgcacgggagcccgctgcaggggcactgcccc 452
           ||||||||||||||||||||    ||||||||||| | |||||||
Sbjct: 427 gtctccgtcaccccgcacggctcgccgctgcagggccgctgcccc 471
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>gb|AY104505.1| Zea mays PCO140706 mRNA sequence
          Length = 933

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 165 aaggtgacggtgcagaacctgtgcggccacgac 197
           |||||||||||||||||||||||| ||||||||
Sbjct: 182 aaggtgacggtgcagaacctgtgcagccacgac 214



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 408 gtctccgtcaccccgcacgggagcccgctgcaggggcactgcccc 452
           ||||||||||||||||||||    ||||||||||| | |||||||
Sbjct: 425 gtctccgtcaccccgcacggctcgccgctgcagggccgctgcccc 469
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>emb|X60173.1|HVNAR7 Hordeum vulgare nar7 gene for NAD(P)H-bispecific nitrate reductase
          Length = 3538

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 64  gctagctaacaatggcggcctcc 86
           |||||||||||||||||||||||
Sbjct: 435 gctagctaacaatggcggcctcc 457
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>gb|AC107447.5| Rattus norvegicus 4 BAC CH230-46D21 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 133054

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 53     ccatacagctagctagctaaca 74
              ||||||||||||||||||||||
Sbjct: 103025 ccatacagctagctagctaaca 103004
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>ref|XM_464032.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 963

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 309 gtgtcggcgcagggcgccgccgtgg 333
           ||||||||| |||||||||||||||
Sbjct: 318 gtgtcggcggagggcgccgccgtgg 294
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>ref|NM_000812.2| Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 1
            (GABRB1), mRNA
          Length = 1925

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  ggcggacagcaaggtcctctt 241
            |||||||||||||||||||||
Sbjct: 1885 ggcggacagcaaggtcctctt 1865
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>gb|U63963.1|HSU63963 Homo sapiens CSF-1 receptor (FMS) gene, complete cds; and unknown (SMF)
             gene, exons, and partial cds
          Length = 42874

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 161   ccacaaggtgacggtgcagaacctg 185
             |||||||||||||||||||| ||||
Sbjct: 18343 ccacaaggtgacggtgcagagcctg 18367
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>gb|AF172282.1| Oryza sativa adh1-adh2 region
          Length = 339485

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   agggcgccgccgtggccaagttcca 343
             |||||||||||||||||||| ||||
Sbjct: 70028 agggcgccgccgtggccaagatcca 70052
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>gb|BT017415.1| Zea mays clone EL01N0331H10.c mRNA sequence
          Length = 761

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 408 gtctccgtcaccccgcacgggagcccgctgcaggggcactgcccc 452
           ||||||||||||||||||||    ||||||||||| | |||||||
Sbjct: 221 gtctccgtcaccccgcacggctcgccgctgcagggccgctgcccc 265
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>gb|AY349423.1| Sus scrofa complement C4 mRNA, partial cds
          Length = 1656

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 118 tgtccgcgatggccatgcccg 138
           |||||||||||||||||||||
Sbjct: 781 tgtccgcgatggccatgcccg 761
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 130     ccatgcccgccgctggtcaag 150
               |||||||||||||||||||||
Sbjct: 2033297 ccatgcccgccgctggtcaag 2033277
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>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051B13,
              complete sequence
          Length = 178000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 319    agggcgccgccgtggccaagttcca 343
              |||||||||||||||||||| ||||
Sbjct: 151055 agggcgccgccgtggccaagatcca 151031
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>gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0037P04, complete sequence
          Length = 139693

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 319   agggcgccgccgtggccaagttcca 343
             |||||||||||||||||||| ||||
Sbjct: 78497 agggcgccgccgtggccaagatcca 78473
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     cagctagctagctaacaatggcggc 82
              |||||||||||||| ||||||||||
Sbjct: 637832 cagctagctagctagcaatggcggc 637808
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>emb|X14767.1|HSGABAAB1 Human mRNA for GABA-A receptor, beta 1 subunit
          Length = 1866

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  ggcggacagcaaggtcctctt 241
            |||||||||||||||||||||
Sbjct: 1826 ggcggacagcaaggtcctctt 1806
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>emb|X03663.1|HSCFMS Human mRNA for c-fms proto-oncogene
          Length = 3992

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ccacaaggtgacggtgcagaacctg 185
            |||||||||||||||||||| ||||
Sbjct: 1689 ccacaaggtgacggtgcagagcctg 1713
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>gb|BC047521.1| Homo sapiens colony stimulating factor 1 receptor, formerly McDonough
            feline sarcoma viral (v-fms) oncogene homolog, mRNA (cDNA
            clone MGC:26296 IMAGE:4819527), complete cds
          Length = 3904

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ccacaaggtgacggtgcagaacctg 185
            |||||||||||||||||||| ||||
Sbjct: 1584 ccacaaggtgacggtgcagagcctg 1608
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>gb|BC022449.1| Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 1, mRNA
            (cDNA clone MGC:25991 IMAGE:4797401), complete cds
          Length = 1929

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  ggcggacagcaaggtcctctt 241
            |||||||||||||||||||||
Sbjct: 1873 ggcggacagcaaggtcctctt 1853
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>emb|CR614851.1| full-length cDNA clone CS0DF033YM17 of Fetal brain of Homo sapiens
            (human)
          Length = 1362

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  ggcggacagcaaggtcctctt 241
            |||||||||||||||||||||
Sbjct: 1338 ggcggacagcaaggtcctctt 1318
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>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
              Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete
              sequence
          Length = 189349

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     cagctagctagctaacaatggcggc 82
              |||||||||||||| ||||||||||
Sbjct: 105440 cagctagctagctagcaatggcggc 105416
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>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence
          Length = 184520

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 221    ggcggacagcaaggtcctctt 241
              |||||||||||||||||||||
Sbjct: 178509 ggcggacagcaaggtcctctt 178489
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 210     attgcggcggtggcggacagcaagg 234
               |||||||||| ||||||||||||||
Sbjct: 2605269 attgcggcggcggcggacagcaagg 2605245
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>ref|NM_005211.2| Homo sapiens colony stimulating factor 1 receptor, formerly McDonough
            feline sarcoma viral (v-fms) oncogene homolog (CSF1R),
            mRNA
          Length = 3985

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ccacaaggtgacggtgcagaacctg 185
            |||||||||||||||||||| ||||
Sbjct: 1681 ccacaaggtgacggtgcagagcctg 1705
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>gb|AC011382.4| Homo sapiens chromosome 5 clone CTB-13H5, complete sequence
          Length = 86829

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 161   ccacaaggtgacggtgcagaacctg 185
             |||||||||||||||||||| ||||
Sbjct: 22327 ccacaaggtgacggtgcagagcctg 22303
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 319     agggcgccgccgtggccaagttcca 343
               |||||||||||||||||||| ||||
Sbjct: 5605937 agggcgccgccgtggccaagatcca 5605913
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     cagctagctagctaacaatggcggc 82
              |||||||||||||| ||||||||||
Sbjct: 637832 cagctagctagctagcaatggcggc 637808
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 309     gtgtcggcgcagggcgccgccgtgg 333
               ||||||||| |||||||||||||||
Sbjct: 1800390 gtgtcggcggagggcgccgccgtgg 1800414
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>ref|XM_234082.3| PREDICTED: Rattus norvegicus similar to homeodomain protein Sax2
            (LOC298981), mRNA
          Length = 1737

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 316  cgcagggcgccgccgtggcca 336
            |||||||||||||||||||||
Sbjct: 1208 cgcagggcgccgccgtggcca 1228
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G11
          Length = 143943

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 309    gtgtcggcgcagggcgccgccgtgg 333
              ||||||||| |||||||||||||||
Sbjct: 118402 gtgtcggcggagggcgccgccgtgg 118426
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>emb|BX648599.1|HSM808750 Homo sapiens mRNA; cDNA DKFZp686G20209 (from clone DKFZp686G20209)
          Length = 3795

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ccacaaggtgacggtgcagaacctg 185
            |||||||||||||||||||| ||||
Sbjct: 1472 ccacaaggtgacggtgcagagcctg 1496
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>gb|AY890719.1| Synthetic construct Homo sapiens clone FLH147935.01L colony
            stimulating factor 1 receptor (CSF1R) mRNA, complete cds
          Length = 2823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ccacaaggtgacggtgcagaacctg 185
            |||||||||||||||||||| ||||
Sbjct: 1389 ccacaaggtgacggtgcagagcctg 1413
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 309   gtgtcggcgcagggcgccgccgtgg 333
             ||||||||| |||||||||||||||
Sbjct: 37034 gtgtcggcggagggcgccgccgtgg 37058
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>dbj|AK108331.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-A01, full
           insert sequence
          Length = 1090

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 309 gtgtcggcgcagggcgccgccgtgg 333
           ||||||||| |||||||||||||||
Sbjct: 422 gtgtcggcggagggcgccgccgtgg 398
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>dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C06,
          full insert sequence
          Length = 1447

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 58 cagctagctagctaacaatggcggc 82
          |||||||||||||| ||||||||||
Sbjct: 43 cagctagctagctagcaatggcggc 67
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>dbj|AK071323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089I04, full
           insert sequence
          Length = 1726

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 319 agggcgccgccgtggccaagttcca 343
           |||||||||||||||||||| ||||
Sbjct: 281 agggcgccgccgtggccaagatcca 305
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     cggtggcggacagcaaggtcc 237
               |||||||||||||||||||||
Sbjct: 1834120 cggtggcggacagcaaggtcc 1834140
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>dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B11,
          full insert sequence
          Length = 1447

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 58 cagctagctagctaacaatggcggc 82
          |||||||||||||| ||||||||||
Sbjct: 43 cagctagctagctagcaatggcggc 67
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>emb|AL773560.9| Pig DNA sequence from clone XX-514B12, complete sequence
          Length = 107413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   tgtccgcgatggccatgcccg 138
             |||||||||||||||||||||
Sbjct: 85774 tgtccgcgatggccatgcccg 85794
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     cagctagctagctaacaatggcggc 82
              |||||||||||||| ||||||||||
Sbjct: 637829 cagctagctagctagcaatggcggc 637805
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 319     agggcgccgccgtggccaagttcca 343
               |||||||||||||||||||| ||||
Sbjct: 5672414 agggcgccgccgtggccaagatcca 5672390
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>dbj|AB208819.1| Homo sapiens mRNA for colony stimulating factor 1 receptor precursor
            variant protein
          Length = 3693

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 161  ccacaaggtgacggtgcagaacctg 185
            |||||||||||||||||||| ||||
Sbjct: 1552 ccacaaggtgacggtgcagagcctg 1576
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>ref|XM_476367.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 59 agctagctagctaacaatggcggc 82
          ||||||||||| ||||||||||||
Sbjct: 61 agctagctagcaaacaatggcggc 84
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>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02,
             complete sequence
          Length = 138677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   tccgcgtctccgtcaccccg 422
             ||||||||||||||||||||
Sbjct: 32169 tccgcgtctccgtcaccccg 32150
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>ref|XM_823644.1| Trypanosoma brucei TREU927 3-methylcrotonoyl-CoA carboxylase
           subunit beta (Tb11.02.4480) partial mRNA
          Length = 1839

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 ctggctgctccccaacggga 270
           ||||||||||||||||||||
Sbjct: 129 ctggctgctccccaacggga 110
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>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01,
             complete sequence
          Length = 140322

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   tccgcgtctccgtcaccccg 422
             ||||||||||||||||||||
Sbjct: 58942 tccgcgtctccgtcaccccg 58923
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>emb|X56011.1|TAPERO Wheat mRNA for peroxidase
          Length = 1247

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 58 cagctagctagctaacaatggcggcctc 85
          |||||||||||||||| ||||| |||||
Sbjct: 69 cagctagctagctaaccatggccgcctc 96
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>emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle heavy chain myosin II-A (Myh9 gene)
          Length = 7355

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 155 tgcggccaggacctgaacctgggt 132
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>dbj|AK147430.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:M5C1040F03
           product:myosin heavy chain IX, full insert sequence
          Length = 7372

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 172 tgcggccaggacctgaacctgggt 149
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>dbj|AK147407.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:M5C1034I06
           product:myosin heavy chain IX, full insert sequence
          Length = 7365

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 165 tgcggccaggacctgaacctgggt 142
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>dbj|AK147296.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
           full-length enriched library, clone:M5C1009M09
           product:myosin heavy chain IX, full insert sequence
          Length = 7366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 162 tgcggccaggacctgaacctgggt 139
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>dbj|AK147235.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
           full-length enriched library, clone:M5C1000I08
           product:myosin heavy chain IX, full insert sequence
          Length = 7366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 162 tgcggccaggacctgaacctgggt 139
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>dbj|AK147233.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
           full-length enriched library, clone:M5C1000D20
           product:myosin heavy chain IX, full insert sequence
          Length = 7362

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 162 tgcggccaggacctgaacctgggt 139
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>dbj|AK147223.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:M421019F08 product:myosin heavy
           chain IX, full insert sequence
          Length = 7359

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 155 tgcggccaggacctgaacctgggt 132
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>dbj|AK147222.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN
           full-length enriched library, clone:M421013D17
           product:myosin heavy chain IX, full insert sequence
          Length = 7350

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 150 tgcggccaggacctgaacctgggt 127
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>dbj|AK147221.1| Mus musculus 16 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:M421012L14 product:myosin heavy
           chain IX, full insert sequence
          Length = 7309

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 109 tgcggccaggacctgaacctgggt 86
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>dbj|AK147216.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M421007L07 product:myosin heavy chain IX, full
           insert sequence
          Length = 7304

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 104 tgcggccaggacctgaacctgggt 81
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>dbj|AK147215.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:M421006M24 product:myosin heavy chain IX,
           full insert sequence
          Length = 7353

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 149 tgcggccaggacctgaacctgggt 126
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>dbj|AK147211.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:M421003O18 product:myosin heavy chain IX,
           full insert sequence
          Length = 7410

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 206 tgcggccaggacctgaacctgggt 183
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>dbj|AK147210.1| Mus musculus 15 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:M421003H12 product:myosin heavy chain IX,
           full insert sequence
          Length = 7366

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 162 tgcggccaggacctgaacctgggt 139
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>dbj|AK147209.1| Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:M421002M21
           product:myosin heavy chain IX, full insert sequence
          Length = 7362

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 162 tgcggccaggacctgaacctgggt 139
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>dbj|AK147208.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:M421002F11 product:myosin heavy
           chain IX, full insert sequence
          Length = 7371

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 171 tgcggccaggacctgaacctgggt 148
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>dbj|AK147206.1| Mus musculus 15 days pregnant adult female amnion cDNA, RIKEN
           full-length enriched library, clone:M421002E03
           product:myosin heavy chain IX, full insert sequence
          Length = 7363

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 163 tgcggccaggacctgaacctgggt 140
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>dbj|AK147203.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:M421001K04 product:myosin heavy
           chain IX, full insert sequence
          Length = 7354

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 154 tgcggccaggacctgaacctgggt 131
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>dbj|AK165379.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430206J09 product:myosin heavy chain IX,
           full insert sequence
          Length = 2902

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 112 tgcggccaggacctgaacctgggt 89
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 311     gtcggcgcagggcgccgccg 330
               ||||||||||||||||||||
Sbjct: 3067648 gtcggcgcagggcgccgccg 3067629
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>dbj|AK083071.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
           enriched library, clone:C530042P11 product:hypothetical
           P-loop containing nucleotide triphosphate hydrolases
           structure containing protein, full insert sequence
          Length = 2226

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 161 tgcggccaggacctgaacctgggt 138
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>dbj|AK053221.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030044M24 product:similar to MYOSIN
           HEAVY CHAIN, NONMUSCLE TYPE B (CELLULAR MYOSIN HEAVY
           CHAIN, TYPE B) (NONMUSCLE MYOSIN HEAVY CHAIN-B)
           (NMMHC-B) (FRAGMENT) [Mus musculus], full insert
           sequence
          Length = 2069

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 167 tgcggccaggacctgaacctgggt 144
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>dbj|AK040822.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530027J07 product:similar to
           MYOSIN HEAVY CHAIN, NONMUSCLE TYPE B (CELLULAR MYOSIN
           HEAVY CHAIN, TYPE B) (NONMUSCLE MYOSIN HEAVY CHAIN-B)
           (NMMHC-B) (FRAGMENT) [Mus musculus], full insert
           sequence
          Length = 2982

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 162 tgcggccaggacctgaacctgggt 139
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 59     agctagctagctaacaatggcggc 82
              ||||||||||| ||||||||||||
Sbjct: 258772 agctagctagcaaacaatggcggc 258795
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 403      tccgcgtctccgtcaccccg 422
                ||||||||||||||||||||
Sbjct: 13603034 tccgcgtctccgtcaccccg 13603015
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>ref|NM_181327.2| Mus musculus myosin, heavy polypeptide 9, non-muscle (Myh9),
           transcript variant 2, mRNA
          Length = 2982

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 162 tgcggccaggacctgaacctgggt 139
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>ref|NM_022410.1| Mus musculus myosin, heavy polypeptide 9, non-muscle (Myh9),
           transcript variant 1, mRNA
          Length = 7355

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 186 tgcggccacgacctgaacctgggt 209
           |||||||| |||||||||||||||
Sbjct: 155 tgcggccaggacctgaacctgggt 132
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 123     gcgatggccatgcccgccgc 142
               ||||||||||||||||||||
Sbjct: 1117616 gcgatggccatgcccgccgc 1117597
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 59    agctagctagctaacaatggcggc 82
             ||||||||||| ||||||||||||
Sbjct: 93636 agctagctagcaaacaatggcggc 93659
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>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0617C02
          Length = 135605

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 59    agctagctagctaacaatggcggc 82
             ||||||||||| ||||||||||||
Sbjct: 10771 agctagctagcaaacaatggcggc 10794
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>dbj|AK108824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F05,
          full insert sequence
          Length = 1461

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 59 agctagctagctaacaatggcggc 82
          ||||||||||| ||||||||||||
Sbjct: 61 agctagctagcaaacaatggcggc 84
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>dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C19, full
           insert sequence
          Length = 3008

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 tccgcgtctccgtcaccccg 422
           ||||||||||||||||||||
Sbjct: 967 tccgcgtctccgtcaccccg 948
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>dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E01, full
           insert sequence
          Length = 2282

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 tccgcgtctccgtcaccccg 422
           ||||||||||||||||||||
Sbjct: 268 tccgcgtctccgtcaccccg 249
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      tgcaaacctctcttcttcct 33
               ||||||||||||||||||||
Sbjct: 1121717 tgcaaacctctcttcttcct 1121736
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>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234,
             complete sequence
          Length = 105887

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    aacctctcttcttcctcgag 37
             ||||||||||||||||||||
Sbjct: 27069 aacctctcttcttcctcgag 27050


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,087,961
Number of Sequences: 3902068
Number of extensions: 3087961
Number of successful extensions: 65741
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64895
Number of HSP's gapped (non-prelim): 846
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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