ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl29e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK066566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 6e-74
2dbj|AK063424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 6e-74
3dbj|AK059029.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 6e-74
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7gb|AC152397.6| Mus musculus chromosome 18, clone RP23-307D12, co... 42 1.6
8gb|AC158667.8| Mus musculus 6 BAC RP23-83P5 (Roswell Park Cancer... 42 1.6
9gb|AE002131.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 6.4
10gb|AC127560.4| Mus musculus BAC clone RP24-267I18 from chromosom... 40 6.4
11gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosom... 40 6.4
12gb|AC091520.10| Mus musculus strain 129/SvJ clone mgs1-480e13, c... 40 6.4
13emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on ch... 40 6.4
14emb|AL158192.15| Human DNA sequence from clone RP11-370F20 on ch... 40 6.4
15gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome... 40 6.4
16gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, com... 40 6.4
17gb|AC093873.2| Homo sapiens BAC clone RP11-615B17 from 2, comple... 40 6.4
18gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.4
19emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chr... 40 6.4
20gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, co... 40 6.4

>dbj|AK066566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O18, full
           insert sequence
          Length = 3520

 Score =  285 bits (144), Expect = 6e-74
 Identities = 255/291 (87%), Gaps = 1/291 (0%)
 Strand = Plus / Plus

                                                                       
Query: 180 gataaactaaaacctataaaaagggaaagacaggcagtcagacctcctgtagagcataaa 239
           |||||| |||| ||| | |||||||||||||||||| | || || |||||||| ||||| 
Sbjct: 586 gataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataag 645

                                                                       
Query: 240 tggtctcttcctgaggttgatcaggttgccaagcctccagtgatttttcaacatgagttg 299
           |||||||||||||  ||||  |||| ||||||||||||||  |||||||||||||| |||
Sbjct: 646 tggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattg 705

                                                                       
Query: 300 attcagagtttctctatcaacatgttctgtaagatacccgttaaccaagttcgtacatac 359
           || ||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||| 
Sbjct: 706 atccagagtttctcaatcaacatgttctgtaagatacctgttaaccaagttcagacatat 765

                                                                       
Query: 360 aaagacctgcgcagtgtactgatgaaacggatatttttatctgctctgcacttcagaatc 419
           ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||  |||||
Sbjct: 766 aaagacctgcgaagtgtcctgatgaagcggatatttttatctgctctgcattttcgaatc 825

                                                              
Query: 420 aatacacgatataagagctcanatcctcc-cttacatcagttgagctggat 469
           |||||| |||||||||||||| |||||||  ||||||| || |||||||||
Sbjct: 826 aatacaagatataagagctcaaatcctccttttacatccgtcgagctggat 876



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                       
Query: 104 aagtccatttggtgccatggcaagcctctttgcaccaaagctaccaggtggcttggccgc 163
           ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 495 aagtccatttggtgctatggcaagcctttttgcaccaaagctacctggtggcttggctgc 554

              
Query: 164 aag 166
           |||
Sbjct: 555 aag 557



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>dbj|AK063424.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-C08, full
           insert sequence
          Length = 2563

 Score =  285 bits (144), Expect = 6e-74
 Identities = 255/291 (87%), Gaps = 1/291 (0%)
 Strand = Plus / Plus

                                                                       
Query: 180 gataaactaaaacctataaaaagggaaagacaggcagtcagacctcctgtagagcataaa 239
           |||||| |||| ||| | |||||||||||||||||| | || || |||||||| ||||| 
Sbjct: 325 gataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataag 384

                                                                       
Query: 240 tggtctcttcctgaggttgatcaggttgccaagcctccagtgatttttcaacatgagttg 299
           |||||||||||||  ||||  |||| ||||||||||||||  |||||||||||||| |||
Sbjct: 385 tggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattg 444

                                                                       
Query: 300 attcagagtttctctatcaacatgttctgtaagatacccgttaaccaagttcgtacatac 359
           || ||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||| 
Sbjct: 445 atccagagtttctcaatcaacatgttctgtaagatacctgttaaccaagttcagacatat 504

                                                                       
Query: 360 aaagacctgcgcagtgtactgatgaaacggatatttttatctgctctgcacttcagaatc 419
           ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||  |||||
Sbjct: 505 aaagacctgcgaagtgtcctgatgaagcggatatttttatctgctctgcattttcgaatc 564

                                                              
Query: 420 aatacacgatataagagctcanatcctcc-cttacatcagttgagctggat 469
           |||||| |||||||||||||| |||||||  ||||||| || |||||||||
Sbjct: 565 aatacaagatataagagctcaaatcctccttttacatccgtcgagctggat 615



 Score =  182 bits (92), Expect = 7e-43
 Identities = 146/164 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctggtaggagaaattgatgatattcccagagcagtgcgggagatagaggctgtgttcgaa 62
           ||||||||||| || |||||||||||||||||| | || || |||||||||||||| |||
Sbjct: 133 ctggtaggagagatcgatgatattcccagagcaatacgagaaatagaggctgtgtttgaa 192

                                                                       
Query: 63  catacactttcaggaaacgaagcagcccctatgtcgactggaagtccatttggtgccatg 122
           ||||||||| ||| |   ||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 193 catacacttccagaaggtgaagcagcccctatgtcaactgcaagtccatttggtgctatg 252

                                                       
Query: 123 gcaagcctctttgcaccaaagctaccaggtggcttggccgcaag 166
           |||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 253 gcaagcctttttgcaccaaagctacctggtggcttggctgcaag 296



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>dbj|AK059029.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C01, full
           insert sequence
          Length = 1481

 Score =  285 bits (144), Expect = 6e-74
 Identities = 255/291 (87%), Gaps = 1/291 (0%)
 Strand = Plus / Plus

                                                                       
Query: 180 gataaactaaaacctataaaaagggaaagacaggcagtcagacctcctgtagagcataaa 239
           |||||| |||| ||| | |||||||||||||||||| | || || |||||||| ||||| 
Sbjct: 504 gataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataag 563

                                                                       
Query: 240 tggtctcttcctgaggttgatcaggttgccaagcctccagtgatttttcaacatgagttg 299
           |||||||||||||  ||||  |||| ||||||||||||||  |||||||||||||| |||
Sbjct: 564 tggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattg 623

                                                                       
Query: 300 attcagagtttctctatcaacatgttctgtaagatacccgttaaccaagttcgtacatac 359
           || ||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||| 
Sbjct: 624 atccagagtttctcaatcaacatgttctgtaagatacctgttaaccaagttcagacatat 683

                                                                       
Query: 360 aaagacctgcgcagtgtactgatgaaacggatatttttatctgctctgcacttcagaatc 419
           ||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||  |||||
Sbjct: 684 aaagacctgcgaagtgtcctgatgaagcggatatttttatctgctctgcattttcgaatc 743

                                                              
Query: 420 aatacacgatataagagctcanatcctcc-cttacatcagttgagctggat 469
           |||||| |||||||||||||| |||||||  ||||||| || |||||||||
Sbjct: 744 aatacaagatataagagctcaaatcctccttttacatccgtcgagctggat 794



 Score =  190 bits (96), Expect = 3e-45
 Identities = 147/164 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctggtaggagaaattgatgatattcccagagcagtgcgggagatagaggctgtgttcgaa 62
           ||||||||||| || |||||||||||||||||| |||| || |||||||||||||| |||
Sbjct: 312 ctggtaggagagatcgatgatattcccagagcaatgcgagaaatagaggctgtgtttgaa 371

                                                                       
Query: 63  catacactttcaggaaacgaagcagcccctatgtcgactggaagtccatttggtgccatg 122
           ||||||||| ||| |   ||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 372 catacacttccagaaggtgaagcagcccctatgtcaactgcaagtccatttggtgctatg 431

                                                       
Query: 123 gcaagcctctttgcaccaaagctaccaggtggcttggccgcaag 166
           |||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 432 gcaagcctttttgcaccaaagctacctggtggcttggctgcaag 475



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  145 bits (73), Expect = 2e-31
 Identities = 133/153 (86%)
 Strand = Plus / Minus

                                                                            
Query: 180      gataaactaaaacctataaaaagggaaagacaggcagtcagacctcctgtagagcataaa 239
                |||||| |||| ||| | |||||||||||||||||| | || || |||||||| ||||| 
Sbjct: 24823738 gataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataag 24823679

                                                                            
Query: 240      tggtctcttcctgaggttgatcaggttgccaagcctccagtgatttttcaacatgagttg 299
                |||||||||||||  ||||  |||| ||||||||||||||  |||||||||||||| |||
Sbjct: 24823678 tggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattg 24823619

                                                 
Query: 300      attcagagtttctctatcaacatgttctgtaag 332
                || ||||||||||| ||||||||||||||||||
Sbjct: 24823618 atccagagtttctcaatcaacatgttctgtaag 24823586



 Score =  139 bits (70), Expect = 9e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                            
Query: 49       aggctgtgttcgaacatacactttcaggaaacgaagcagcccctatgtcgactggaagtc 108
                |||||||||| |||||||||||| ||| |   ||||||||||||||||| |||| |||||
Sbjct: 24823884 aggctgtgtttgaacatacacttccagaaggtgaagcagcccctatgtcaactgcaagtc 24823825

                                                                          
Query: 109      catttggtgccatggcaagcctctttgcaccaaagctaccaggtggcttggccgcaag 166
                |||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 24823824 catttggtgctatggcaagcctttttgcaccaaagctacctggtggcttggctgcaag 24823767



 Score =  119 bits (60), Expect = 9e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                            
Query: 331      agatacccgttaaccaagttcgtacatacaaagacctgcgcagtgtactgatgaaacgga 390
                ||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 24823098 agatacctgttaaccaagttcagacatataaagacctgcgaagtgtcctgatgaagcgga 24823039

                                                            
Query: 391      tatttttatctgctctgcacttcagaatcaatacacgatataag 434
                ||||||||||||||||||| ||  ||||||||||| ||||||||
Sbjct: 24823038 tatttttatctgctctgcattttcgaatcaatacaagatataag 24822995



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 3        ctggtaggagaaattgatgatattcccagagca 35
                ||||||||||| || ||||||||||||||||||
Sbjct: 24824026 ctggtaggagagatcgatgatattcccagagca 24823994



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>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0072A21
          Length = 158287

 Score =  145 bits (73), Expect = 2e-31
 Identities = 133/153 (86%)
 Strand = Plus / Minus

                                                                         
Query: 180   gataaactaaaacctataaaaagggaaagacaggcagtcagacctcctgtagagcataaa 239
             |||||| |||| ||| | |||||||||||||||||| | || || |||||||| ||||| 
Sbjct: 34821 gataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataag 34762

                                                                         
Query: 240   tggtctcttcctgaggttgatcaggttgccaagcctccagtgatttttcaacatgagttg 299
             |||||||||||||  ||||  |||| ||||||||||||||  |||||||||||||| |||
Sbjct: 34761 tggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattg 34702

                                              
Query: 300   attcagagtttctctatcaacatgttctgtaag 332
             || ||||||||||| ||||||||||||||||||
Sbjct: 34701 atccagagtttctcaatcaacatgttctgtaag 34669



 Score =  139 bits (70), Expect = 9e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                         
Query: 49    aggctgtgttcgaacatacactttcaggaaacgaagcagcccctatgtcgactggaagtc 108
             |||||||||| |||||||||||| ||| |   ||||||||||||||||| |||| |||||
Sbjct: 34967 aggctgtgtttgaacatacacttccagaaggtgaagcagcccctatgtcaactgcaagtc 34908

                                                                       
Query: 109   catttggtgccatggcaagcctctttgcaccaaagctaccaggtggcttggccgcaag 166
             |||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 34907 catttggtgctatggcaagcctttttgcaccaaagctacctggtggcttggctgcaag 34850



 Score =  119 bits (60), Expect = 9e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                         
Query: 331   agatacccgttaaccaagttcgtacatacaaagacctgcgcagtgtactgatgaaacgga 390
             ||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 34181 agatacctgttaaccaagttcagacatataaagacctgcgaagtgtcctgatgaagcgga 34122

                                                         
Query: 391   tatttttatctgctctgcacttcagaatcaatacacgatataag 434
             ||||||||||||||||||| ||  ||||||||||| ||||||||
Sbjct: 34121 tatttttatctgctctgcattttcgaatcaatacaagatataag 34078



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 3     ctggtaggagaaattgatgatattcccagagca 35
             ||||||||||| || ||||||||||||||||||
Sbjct: 35109 ctggtaggagagatcgatgatattcccagagca 35077



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>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0029G06
          Length = 169711

 Score =  145 bits (73), Expect = 2e-31
 Identities = 133/153 (86%)
 Strand = Plus / Minus

                                                                          
Query: 180    gataaactaaaacctataaaaagggaaagacaggcagtcagacctcctgtagagcataaa 239
              |||||| |||| ||| | |||||||||||||||||| | || || |||||||| ||||| 
Sbjct: 157419 gataaaataaagcctgtgaaaagggaaagacaggcaattaggccacctgtagaacataag 157360

                                                                          
Query: 240    tggtctcttcctgaggttgatcaggttgccaagcctccagtgatttttcaacatgagttg 299
              |||||||||||||  ||||  |||| ||||||||||||||  |||||||||||||| |||
Sbjct: 157359 tggtctcttcctggagttgcccaggatgccaagcctccagcaatttttcaacatgaattg 157300

                                               
Query: 300    attcagagtttctctatcaacatgttctgtaag 332
              || ||||||||||| ||||||||||||||||||
Sbjct: 157299 atccagagtttctcaatcaacatgttctgtaag 157267



 Score =  139 bits (70), Expect = 9e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                          
Query: 49     aggctgtgttcgaacatacactttcaggaaacgaagcagcccctatgtcgactggaagtc 108
              |||||||||| |||||||||||| ||| |   ||||||||||||||||| |||| |||||
Sbjct: 157565 aggctgtgtttgaacatacacttccagaaggtgaagcagcccctatgtcaactgcaagtc 157506

                                                                        
Query: 109    catttggtgccatggcaagcctctttgcaccaaagctaccaggtggcttggccgcaag 166
              |||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct: 157505 catttggtgctatggcaagcctttttgcaccaaagctacctggtggcttggctgcaag 157448



 Score =  119 bits (60), Expect = 9e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                          
Query: 331    agatacccgttaaccaagttcgtacatacaaagacctgcgcagtgtactgatgaaacgga 390
              ||||||| |||||||||||||  ||||| ||||||||||| ||||| |||||||| ||||
Sbjct: 156779 agatacctgttaaccaagttcagacatataaagacctgcgaagtgtcctgatgaagcgga 156720

                                                          
Query: 391    tatttttatctgctctgcacttcagaatcaatacacgatataag 434
              ||||||||||||||||||| ||  ||||||||||| ||||||||
Sbjct: 156719 tatttttatctgctctgcattttcgaatcaatacaagatataag 156676



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 3      ctggtaggagaaattgatgatattcccagagca 35
              ||||||||||| || ||||||||||||||||||
Sbjct: 157707 ctggtaggagagatcgatgatattcccagagca 157675



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>gb|AC152397.6| Mus musculus chromosome 18, clone RP23-307D12, complete sequence
          Length = 218647

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 201    agggaaagacaggcagtcaga 221
              |||||||||||||||||||||
Sbjct: 115907 agggaaagacaggcagtcaga 115927



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>gb|AC158667.8| Mus musculus 6 BAC RP23-83P5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 234055

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   taaaaagggaaagacaggcag 216
             |||||||||||||||||||||
Sbjct: 46406 taaaaagggaaagacaggcag 46386



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>gb|AE002131.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 32 of 59 of the
            complete genome
          Length = 11306

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    aggagaaattgatgatattc 27
            ||||||||||||||||||||
Sbjct: 3198 aggagaaattgatgatattc 3217



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>gb|AC127560.4| Mus musculus BAC clone RP24-267I18 from chromosome 5, complete sequence
          Length = 186768

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 188   aaaacctataaaaagggaaagaca 211
             ||||||| ||||||||||||||||
Sbjct: 28595 aaaacctttaaaaagggaaagaca 28572



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>gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosome 14, complete sequence
          Length = 180794

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    tatttttatctgctctgcac 410
              ||||||||||||||||||||
Sbjct: 172193 tatttttatctgctctgcac 172174



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>gb|AC091520.10| Mus musculus strain 129/SvJ clone mgs1-480e13, complete sequence
          Length = 105813

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   tatttttatctgctctgcac 410
             ||||||||||||||||||||
Sbjct: 95744 tatttttatctgctctgcac 95725



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>emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on chromosome 9 Contains the 5'
              end of the SHB gene for SHB (Src homology 2 domain
              containing) adaptor protein B and two CpG islands, complete
              sequence
          Length = 164857

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    taaactaaaacctataaaaa 201
              ||||||||||||||||||||
Sbjct: 111722 taaactaaaacctataaaaa 111741



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>emb|AL158192.15| Human DNA sequence from clone RP11-370F20 on chromosome 13 Contains the
             5' end of the UGCGL2 gene for UDP-glucose ceramide
             glucosyltransferase-like 2 (HUGT2 FLJ10873 FLJ11485), the
             5' end of the gene for a novel protein similar to heparan
             sulfate 6-sulfotransferase and two CpG islands, complete
             sequence
          Length = 186131

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   ttatctgctctgcacttcag 415
             ||||||||||||||||||||
Sbjct: 87390 ttatctgctctgcacttcag 87409



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>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence
          Length = 242759

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    tatttttatctgctctgcac 410
              ||||||||||||||||||||
Sbjct: 182384 tatttttatctgctctgcac 182403



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>gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, complete sequence
          Length = 178009

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    acaggcagtcagacctcctg 228
              ||||||||||||||||||||
Sbjct: 163120 acaggcagtcagacctcctg 163139



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>gb|AC093873.2| Homo sapiens BAC clone RP11-615B17 from 2, complete sequence
          Length = 210320

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   gtgatttttcaacatgagtt 298
             ||||||||||||||||||||
Sbjct: 59822 gtgatttttcaacatgagtt 59841



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     tttgcaccaaagctaccagg 151
               ||||||||||||||||||||
Sbjct: 1405316 tttgcaccaaagctaccagg 1405335



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>emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chromosome 4, complete
              sequence
          Length = 176049

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 8      aggagaaattgatgatattcccag 31
              ||||||||| ||||||||||||||
Sbjct: 163386 aggagaaatagatgatattcccag 163363



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>gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, complete sequence
          Length = 190017

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 188   aaaacctataaaaagggaaagaca 211
             ||||||| ||||||||||||||||
Sbjct: 82440 aaaacctttaaaaagggaaagaca 82417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,050,263
Number of Sequences: 3902068
Number of extensions: 4050263
Number of successful extensions: 76620
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76533
Number of HSP's gapped (non-prelim): 87
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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