Clone Name | bastl29e02 |
---|---|
Clone Library Name | barley_pub |
>TERF2_MOUSE (O35144) Telomeric repeat-binding factor 2 (TTAGGG repeat-binding| factor 2) (Telomeric DNA-binding protein) Length = 495 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = +3 Query: 336 GGGGRELRSGFL*GCRGANDGARRRRHLAAPCAGSAAEQG 455 GGGG SG R + G R RR P G AAE+G Sbjct: 3 GGGGSSDSSGRAASRRASRSGGRARRGRHEPGLGGAAERG 42
>ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43)| (Trithorax-homolog protein 4) (TRX-homolog protein 4) (Trithorax 4) (Protein SET DOMAIN GROUP 16) Length = 990 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = +1 Query: 112 ILTEKTRRAQATLKGFVAERGYACACD-SSCGYRRDGKALSAVEFEKHAGAKSKN 273 +L +K A ++G R + C SCG ++ KALS E+E+H G+KSKN Sbjct: 488 VLPDKVIVVCAGVEGVYFPRLHLVVCKCGSCGPKK--KALS--EWERHTGSKSKN 538
>MYOB_DICDI (P34092) Myosin IB heavy chain| Length = 1111 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/63 (30%), Positives = 26/63 (41%) Frame = +3 Query: 267 QEPERPHLPPQRHLALRPLPRAQGGGGRELRSGFL*GCRGANDGARRRRHLAAPCAGSAA 446 Q+ +RP PQ+ RP+P+ Q GGG R + AP G A Sbjct: 962 QQQQRPMPQPQQGGGARPMPQPQQGGG--------------------ARPMGAPQQGGAP 1001 Query: 447 EQG 455 +QG Sbjct: 1002 QQG 1004
>NOLA1_BRARE (Q7ZVE0) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar| protein family A member 1) Length = 226 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 6/45 (13%) Frame = +3 Query: 288 LPPQRHLALRPLPRAQ------GGGGRELRSGFL*GCRGANDGAR 404 LP QR L P + GGGGR R G G RGAN G R Sbjct: 146 LPLQRFLPRPPGEKGPPRGGRGGGGGRGGRGGGFRGGRGANGGGR 190
>MAM_DROME (P21519) Neurogenic protein mastermind| Length = 1594 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 267 QEPERPHLPPQRHLALRPLPRAQGGGGRELRSGFL 371 Q+P++ HLPPQ H P P G G ++ FL Sbjct: 704 QQPQQQHLPPQFHQQKGPGP----GAGMNVQQNFL 734
>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)| (Trithorax-homolog protein 5) (TRX-homolog protein 5) (Protein SET DOMAIN GROUP 29) Length = 1043 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 Query: 181 CACDSSCGYRRDGKALSAVEFEKHAGAKSKN 273 C C SCG R KALS E+E+H G+K+KN Sbjct: 519 CKC-GSCGPER--KALS--EWERHTGSKAKN 544 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,633,215 Number of Sequences: 219361 Number of extensions: 638600 Number of successful extensions: 1804 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1753 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1804 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)