>ZN646_HUMAN (O15015) Zinc finger protein 646|
          Length = 1829

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -1

Query: 265  PVPISLAAGLWSVLPLAGSLGVWLGGWLAQSLRREREKE 149
            P P+S  AG     P+ G LG   GGW+ Q L R  E E
Sbjct: 1452 PEPLSWGAGKAGGWPVGGGLGNHSGGWVPQFLTRSEEPE 1490

>MTRM_DROYA (P83733) Protein matrimony (Cell cycle arrest protein D52)|
          Length = 219

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +2

Query: 44  PHPHVTDSWW*EDDQAEHRHHTYHHQYK*RSRPAPFFLSLSAETLSQP------ATQPDT 205
           PHPH          Q +H HH + H ++ + +P PF L    E + +P       + PDT
Sbjct: 80  PHPH----------QHQHHHHHHKHIHRTQLKPPPFILPKPQEEIIEPEREIKICSSPDT 129

>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain|
           protein MBH1) (Homeobox protein B-H1)
          Length = 384

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 24/73 (32%), Positives = 30/73 (41%)
 Frame = +2

Query: 5   TAEQQRDTTTELPPHPHVTDSWW*EDDQAEHRHHTYHHQYK*RSRPAPFFLSLSAETLSQ 184
           TA     + T  PP PH+        D  +H HH  HH  +     AP   SL      Q
Sbjct: 61  TAPSSPISVTLEPPEPHLVT------DGPQHHHHL-HHGQQPPPPSAPPAQSLQPSPQQQ 113

Query: 185 PATQPDTQRASQR 223
           P  QP  Q A+Q+
Sbjct: 114 PPPQP--QSAAQQ 124

>BARH2_MOUSE (Q8VIB5) BarH-like 2 homeobox protein (Bar-class homeodomain|
           protein MBH1) (Homeobox protein B-H1)
          Length = 384

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 23/73 (31%), Positives = 29/73 (39%)
 Frame = +2

Query: 5   TAEQQRDTTTELPPHPHVTDSWW*EDDQAEHRHHTYHHQYK*RSRPAPFFLSLSAETLSQ 184
           TA     + T  PP PH+        D  +H HH +H Q        P   SL      Q
Sbjct: 61  TAPSSPISVTLEPPEPHLVT------DGPQHHHHLHHSQQPPPPSAVP-AQSLQPSPQQQ 113

Query: 185 PATQPDTQRASQR 223
           P  QP  Q A+Q+
Sbjct: 114 PPPQP--QSAAQQ 124

>CAV2_CAEEL (Q18879) Caveolin-2|
          Length = 351

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
 Frame = +2

Query: 32  TELPPHPH---------VTDSWW*EDDQAEHRHHTYHHQYK 127
           T+ PP P          +TD+   ED    H HH +HHQ++
Sbjct: 12  TQRPPIPQYDTVDDIDELTDAMDKEDHHHHHHHHEHHHQHQ 52

>Y269_SYNY3 (P73888) Hypothetical protein slr0269|
          Length = 199

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 222 RWLARWV-SGWVAGWLKVSAERERKNGAGRLLYLY 121
           RW+ ++  SGW   W  V+A + R  G G L+Y +
Sbjct: 92  RWVPKFFRSGWQLSWADVTALKCRTTGQGGLVYYF 126

>ENV_CAEVC (P31626) Env polyprotein (Coat polyprotein) [Contains: Leader|
           peptide; Surface protein; Transmembrane protein]
          Length = 966

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 241 GLWSVLPLAGSLGVWLGGWLAQSLRREREK 152
           GL  +L L  ++G+W+ GWL +  + ++ K
Sbjct: 905 GLLRLLVLPLTMGIWINGWLGEHHKNKKRK 934

>Y5695_STRCO (Q9KYS0) Hypothetical zinc metalloprotease SCO5695 (EC 3.4.24.-)|
          Length = 430

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -1

Query: 253 SLAAGLWSVLPLAGSLGVWLGGWLAQSLRREREKEWRRPAP 131
           +L+  L+++LPL    G  + G L +SLRR   K  RRP P
Sbjct: 352 NLSLFLFNMLPLLPLDGGHIAGALWESLRRATAKVLRRPDP 392


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,455,774
Number of Sequences: 219361
Number of extensions: 718202
Number of successful extensions: 3110
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3008
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)