Clone Name | bastl29b12 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 351 bits (177), Expect = 1e-93 Identities = 249/273 (91%) Strand = Plus / Plus Query: 177 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 236 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 54 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 113 Query: 237 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 114 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 173 Query: 297 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 356 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 174 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 233 Query: 357 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 416 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 234 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 293 Query: 417 ctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||||||||||||||||||| Sbjct: 294 cttcttcgagatgctcgggaactggtccttcgg 326
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 351 bits (177), Expect = 1e-93 Identities = 249/273 (91%) Strand = Plus / Plus Query: 177 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 236 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 155130 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 155189 Query: 237 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 155190 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 155249 Query: 297 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 356 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 155250 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 155309 Query: 357 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 416 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 155310 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 155369 Query: 417 ctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||||||||||||||||||| Sbjct: 155370 cttcttcgagatgctcgggaactggtccttcgg 155402 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccgccgccgccatccgcctc 60 |||||||||||||||||||| Sbjct: 9054 ccgccgccgccatccgcctc 9035
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 351 bits (177), Expect = 1e-93 Identities = 249/273 (91%) Strand = Plus / Plus Query: 177 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 236 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 46557 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 46616 Query: 237 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 46617 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 46676 Query: 297 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 356 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 46677 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 46736 Query: 357 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 416 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 46737 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 46796 Query: 417 ctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||||||||||||||||||| Sbjct: 46797 cttcttcgagatgctcgggaactggtccttcgg 46829
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 351 bits (177), Expect = 1e-93 Identities = 249/273 (91%) Strand = Plus / Plus Query: 177 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 236 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5283359 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5283418 Query: 237 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 5283419 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5283478 Query: 297 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 356 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5283479 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5283538 Query: 357 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 416 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5283539 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5283598 Query: 417 ctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||||||||||||||||||| Sbjct: 5283599 cttcttcgagatgctcgggaactggtccttcgg 5283631 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gccaccgccgccgccatccgcctc 60 ||||||||||||||||||| |||| Sbjct: 17571436 gccaccgccgccgccatcctcctc 17571413 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccgccgccgccatccgcctc 60 |||||||||||||||||||| Sbjct: 5137283 ccgccgccgccatccgcctc 5137264
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 351 bits (177), Expect = 1e-93 Identities = 249/273 (91%) Strand = Plus / Plus Query: 177 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 236 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 200 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 259 Query: 237 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 260 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 319 Query: 297 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 356 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 320 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 379 Query: 357 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 416 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 380 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 439 Query: 417 ctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||||||||||||||||||| Sbjct: 440 cttcttcgagatgctcgggaactggtccttcgg 472
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 351 bits (177), Expect = 1e-93 Identities = 249/273 (91%) Strand = Plus / Plus Query: 177 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 236 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5284146 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5284205 Query: 237 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 5284206 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5284265 Query: 297 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 356 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5284266 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5284325 Query: 357 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 416 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5284326 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5284385 Query: 417 ctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||||||||||||||||||| Sbjct: 5284386 cttcttcgagatgctcgggaactggtccttcgg 5284418 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gccaccgccgccgccatccgcctc 60 ||||||||||||||||||| |||| Sbjct: 17580476 gccaccgccgccgccatcctcctc 17580453 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccgccgccgccatccgcctc 60 |||||||||||||||||||| Sbjct: 5138070 ccgccgccgccatccgcctc 5138051
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 264 bits (133), Expect = 2e-67 Identities = 217/245 (88%) Strand = Plus / Plus Query: 205 tggccgtcgagccccgtggtacccgtcgacgaccccacgctcttgttcgccaacgccggg 264 ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| || Sbjct: 228 tggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgga 287 Query: 265 atgaaccagttcaagcccgtattcctcggcaccgcctccccggactcacagcttggccgc 324 ||||||||||||||||| || ||||||||||| || | |||||||| | ||| |||||| Sbjct: 288 atgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccgc 347 Query: 325 ctgagccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgacctt 384 ||| ||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 348 ctgcaccgtgcctgtaacacccaaaagtgcatccgcgccggcgggaagcacaacgacctc 407 Query: 385 gacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtcc 444 |||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 408 gacgacgtggggaatgacacctaccaccataccttcttcgagatgcttgggaactggtct 467 Query: 445 ttcgg 449 ||||| Sbjct: 468 ttcgg 472
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 129 bits (65), Expect = 8e-27 Identities = 98/109 (89%) Strand = Plus / Minus Query: 341 acacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaagg 400 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | Sbjct: 2171056 acacccagaagtgcatccgcgcttccggcaagcacaacgaccttgaagacgtggggcgcg 2170997 Query: 401 acacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 | || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2170996 atacctaccaccacacctttttcgagatgctcggcaactggtcgttcgg 2170948 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||| ||||||||||||||| Sbjct: 2171128 ccaacgccggcatgaaccagttcaag 2171103
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 ||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 309 caacacccagaagtgcatccgcgccggtggcaagcacaacgatctcgacgatgtgggcaa 368 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||| |||||||||||||| ||||||||| | || |||||||| ||||| Sbjct: 369 ggacagctaccaccacaccttcttcgagatgatgggcaactggtctttcgg 419
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 1350746 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 1350687 Query: 400 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| Sbjct: 1350686 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcgg 1350637 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 231 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcc 281 ||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1350855 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 1350805
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 223 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 282 Query: 400 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| Sbjct: 283 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcgg 332 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 231 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcc 281 ||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 114 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 164
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 97.6 bits (49), Expect = 3e-17 Identities = 91/105 (86%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| |||||||||||||| |||||||||||||||||||| || |||||||| || || Sbjct: 204 caacacgcagaagtgcatccgtgccggcggcaagcacaacgatctggacgacgtcggcaa 263 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtc 443 ||| |||||| ||||| || ||||||||||| || |||||||| Sbjct: 264 ggatgtgtaccatcacacgttcttcgagatgctgggcaactggtc 308 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 248 tgttcgccaacgccgggatgaaccagttcaagcc 281 |||||||||| || || ||||||||||||||||| Sbjct: 113 tgttcgccaatgcgggcatgaaccagttcaagcc 146
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 366 cggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcga 425 |||||||||||||||||| || || |||||| | |||||||||||||||||||| ||||| Sbjct: 1925776 cggcaagcacaacgacctggaggaggtggggcacgacacgtaccaccacaccttcttcga 1925717 Query: 426 gatgctcgggaactgg 441 |||||| || |||||| Sbjct: 1925716 gatgctgggcaactgg 1925701
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 349 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 408 ||||||||||| || || || ||||| |||||||| |||||||| || |||||||| ||| Sbjct: 271 aagtgcatccgtgcaggtggtaagcataacgacctcgacgacgttggcaaggacacctac 330 Query: 409 caccacacctttttcgagatgctcgggaactggtc 443 ||||| ||||||||||| ||||| || |||||||| Sbjct: 331 caccatacctttttcgaaatgctgggcaactggtc 365 Score = 44.1 bits (22), Expect = 0.39 Identities = 40/46 (86%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaagcccgtattcctcggca 295 |||||||||||||| |||||||||| ||| ||| | ||||| |||| Sbjct: 172 ttcgccaacgccggtatgaaccagtacaaacccatcttccttggca 217
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 433 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 492 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || || |||||||| || || ||||| || |||||||||||||| Sbjct: 493 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcgg 543 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 326 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 385 Query: 292 ggcaccgc 299 |||||||| Sbjct: 386 ggcaccgc 393
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 294 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 353 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || || |||||||| || || ||||| || |||||||||||||| Sbjct: 354 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcgg 404 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 187 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 246 Query: 292 ggcaccgc 299 |||||||| Sbjct: 247 ggcaccgc 254
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 434 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 493 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || ||||| ||||| || || ||||| || |||||||||||||| Sbjct: 494 ggatgtctatcaccataccttctttgaaatgctgggaaactggtccttcgg 544 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 327 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 386 Query: 292 ggcaccgc 299 |||||||| Sbjct: 387 ggcaccgc 394
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 3407 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 3348 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || || |||||||| || || ||||| || |||||||||||||| Sbjct: 3347 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcgg 3297 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 3514 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 3455 Query: 292 ggcaccgc 299 |||||||| Sbjct: 3454 ggcaccgc 3447
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 24495 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 24554 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || || |||||||| || || ||||| || |||||||||||||| Sbjct: 24555 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcgg 24605 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 24388 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 24447 Query: 292 ggcaccgc 299 |||||||| Sbjct: 24448 ggcaccgc 24455
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 275 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 334 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || || |||||||| || || ||||| || |||||||||||||| Sbjct: 335 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcgg 385 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 168 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 227 Query: 292 ggcaccgc 299 |||||||| Sbjct: 228 ggcaccgc 235
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 19569 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 19510 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || || |||||||| || || ||||| || |||||||||||||| Sbjct: 19509 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcgg 19459 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 19676 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 19617 Query: 292 ggcaccgc 299 |||||||| Sbjct: 19616 ggcaccgc 19609
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 1911 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 1852 Query: 399 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||| || || |||||||| || || ||||| || |||||||||||||| Sbjct: 1851 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcgg 1801 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 232 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 291 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 2018 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 1959 Query: 292 ggcaccgc 299 |||||||| Sbjct: 1958 ggcaccgc 1951
>gb|AC125476.30| Medicago truncatula clone mth2-10e13, complete sequence Length = 153919 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 334 gcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtg 393 |||||||| | ||||||||| ||||| || || || |||||||| || ||||| |||||| Sbjct: 107106 gcctgcaatatccagaagtgtatccgagcaggtggtaagcacaatgatcttgatgacgtg 107165 Query: 394 gggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtcctt 446 ||||| ||||| ||||| ||||| || || |||||||| || ||||||||||| Sbjct: 107166 gggaaagacacttaccatcacactttctttgagatgcttggtaactggtcctt 107218 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gggatgaaccagttcaagcc 281 |||||||||||||||||||| Sbjct: 107034 gggatgaaccagttcaagcc 107053
>ref|NM_001031056.1| Gallus gallus alanyl-tRNA synthetase like (AARSL), mRNA Length = 3367 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 430 ctcgggaactggtcctt 446 || |||||||||||||| Sbjct: 415 ctggggaactggtcctt 431 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 262 gggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>emb|AJ720883.1| Gallus gallus mRNA for hypothetical protein, clone 28n18 Length = 3367 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 430 ctcgggaactggtcctt 446 || |||||||||||||| Sbjct: 415 ctggggaactggtcctt 431 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 262 gggatgaaccagttcaagcccgtattcctcggcac 296 ||||||||||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>emb|AJ720131.1| Gallus gallus mRNA for hypothetical protein, clone 11d4 Length = 3107 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 399 ggacacgtaccaccacacctttttcgagatg 429 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 345 ccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||||||| |||||||||||||||||||||||||||| Sbjct: 5218055 ccagaagtgcgtccgcgccggcggcaagcacaacgacct 5218017 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 233 acgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 |||||||||| || ||||| ||||||| |||||||||||||||||| Sbjct: 5218152 acgaccccaccctgctgttcaccaacgcggggatgaaccagttcaag 5218106
>ref|NM_001005836.1| Gallus gallus alanyl-tRNA synthetase (AARS), mRNA Length = 3107 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 399 ggacacgtaccaccacacctttttcgagatg 429 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 592 gtctaccaccacactttctttgagatgct 620 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 439 ttcgccaacgctggcatgaaccagttcaa 467
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 592 gtctaccaccacactttctttgagatgct 620 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 439 ttcgccaacgctggcatgaaccagttcaa 467
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 373 cacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctc 432 |||||||||||||||||||| || |||||||| |||||||| || || || || ||||| Sbjct: 510 cacaacgaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgctt 569 Query: 433 gggaactggtccttcgg 449 || |||||||| ||||| Sbjct: 570 ggaaactggtcattcgg 586
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 597 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 656 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 657 gtctaccaccacactttctttgagatgct 685 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 504 ttcgccaacgctggcatgaaccagttcaa 532
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 606 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 665 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 666 gtctaccaccacactttctttgagatgct 694 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 513 ttcgccaacgctggcatgaaccagttcaa 541
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 585 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 644 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 645 gtctaccaccacactttctttgagatgct 673 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 492 ttcgccaacgctggcatgaaccagttcaa 520
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 326 gtctaccaccacactttctttgagatgct 354 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 173 ttcgccaacgctggcatgaaccagttcaa 201
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 408 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 467 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 468 gtctaccaccacactttctttgagatgct 496 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 315 ttcgccaacgctggcatgaaccagttcaa 343
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 598 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 657 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 658 gtctaccaccacactttctttgagatgct 686 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 505 ttcgccaacgctggcatgaaccagttcaa 533
>ref|XM_214690.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase (predicted) (Aars_predicted), mRNA Length = 3639 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 ||||||||||||||||| ||||| ||||| ||||| ||||| || |||||||| || || Sbjct: 590 acccagaagtgcatccgagccgggggcaaacacaatgacctggatgacgtgggcaaagat 649 Query: 403 acgtaccaccacacctttttcgagatgct 431 |||||||||||||| || |||||||| Sbjct: 650 gtctaccaccacaccttctttgagatgct 678 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 497 ttcgccaacgcaggcatgaaccagttcaa 525
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 80695 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 80754 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 80755 gtctaccaccacactttctttgagatgct 80783
>dbj|AB097816.1| Mesocricetus auratus mRNA for alanyl trna synthetase, complete cds Length = 2907 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||| ||||||||||| || || ||||| |||||| Sbjct: 214 acccagaaatgcatccgtgctgggggcaaacacaacgacctggatgatgtgggcaaggac 273 Query: 403 acgtaccaccacacctttttcgagatgct 431 |||||||||||||| || |||||||| Sbjct: 274 gtctaccaccacaccttctttgagatgct 302
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 166511 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 166570 Query: 403 acgtaccaccacacctttttcgagatgct 431 ||||||||||| || || |||||||| Sbjct: 166571 gtctaccaccacactttctttgagatgct 166599
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 296393 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 296334
>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence Length = 154240 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 89540 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 89481
>ref|XM_821287.1| Trypanosoma brucei TREU927 clone RPCI93-3D8 alanyl-tRNA synthetase (Tb927.6.700) partial mRNA Length = 2901 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 250 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 309
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 403 acgtaccaccacacctttttcgagatgc 430 ||||||||||| || || ||||||| Sbjct: 326 gtctaccaccacactttctttgagatgc 353 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 173 ttcgccaacgctggcatgaaccagttcaa 201
>ref|XM_588170.2| PREDICTED: Bos taurus similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC510933), mRNA Length = 3299 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 339 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 398 |||||| |||||||||||||| || |||||||| ||||| ||||| || |||||||| || Sbjct: 245 caacactcagaagtgcatccgggctggcggcaaacacaatgacctggatgacgtgggcaa 304 Query: 399 gga 401 ||| Sbjct: 305 gga 307
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 349 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 408 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 232 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 291 Query: 409 caccacacctttttcgagatgctcgggaactggtc 443 ||||||||||| ||||||||||| || |||||||| Sbjct: 292 caccacaccttcttcgagatgctgggcaactggtc 326 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 238 cccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||| || ||||| ||||||||||| |||||||||| ||||||| | ||||| ||||| Sbjct: 121 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 179
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 247 ttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcgg 293 |||||| |||||||||||||||||||||||||| ||| |||||||| Sbjct: 3553776 ttgttcaccaacgccgggatgaaccagttcaaggacgttttcctcgg 3553730 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgacct 383 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 3553692 cagaaatgcgtccgcgccggcggcaagcacaacgacct 3553655 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 409 caccacacctttttcgagatgctcgg 434 ||||||||||| |||||||||||||| Sbjct: 3553629 caccacaccttcttcgagatgctcgg 3553604 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 ttgctggccaccgccgccgccatccgcc 58 ||||| |||| ||||||||||||||||| Sbjct: 599171 ttgctcgccatcgccgccgccatccgcc 599144
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 233 acgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 |||| ||||||||||| ||| |||||||||| ||||||||||||||| Sbjct: 3572278 acgatcccacgctcttattcaccaacgccggtatgaaccagttcaag 3572232
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 349 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 408 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 553191 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 553132 Query: 409 caccacacctttttcgagatgctcgggaactggtc 443 ||||||||||| ||||||||||| || |||||||| Sbjct: 553131 caccacaccttcttcgagatgctgggcaactggtc 553097 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 238 cccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 ||||| || ||||| ||||||||||| |||||||||| ||||||| | ||||| ||||| Sbjct: 553302 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 553244
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 389 |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 220 aacagccagaagtgcatccgtgccggtggcaagcacaatgacctggacga 269 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaagccc 282 |||||||| || || |||||||||||||||||| Sbjct: 130 ttcgccaatgcgggtatgaaccagttcaagccc 162
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgacct 383 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 1704450 cagaaatgcgtccgcgccggcggcaagcacaacgacct 1704487
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgacct 383 ||||||||| | |||||||||||||||||||||||||| Sbjct: 4336125 cagaagtgcgtgcgcgccggcggcaagcacaacgacct 4336088
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 344 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 389 ||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 2140860 cccagaagtgcgtgcgggccggcggcaagcacaacgacctggacga 2140815 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 169 ttcatcgacttcttcaagtccaag 192 |||||||||||||||||||||||| Sbjct: 2141020 ttcatcgacttcttcaagtccaag 2140997 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||| ||||||||||||||| Sbjct: 2140935 ccaacgccggcatgaaccagttcaag 2140910 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tgctggccaccgccgccgcc 51 |||||||||||||||||||| Sbjct: 405378 tgctggccaccgccgccgcc 405359
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 ||||| |||||| |||||||||| ||||| ||||||||||||||| Sbjct: 163902 gacccaacgctcctgttcgccaatgccggcatgaaccagttcaag 163946 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 344 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 396 |||||||||| |||| ||||| ||||||||||||||||| || |||||||| Sbjct: 163996 cccagaagtgtgtccgggccggtggcaagcacaacgacctggagaacgtgggg 164048
>ref|XM_381082.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00906.1) partial mRNA Length = 2874 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 254 ccaacgccgggatgaaccagttcaagcccgtattcctcggcaccg 298 ||||||| || |||||||||||||||||| | ||||||||||||| Sbjct: 134 ccaacgctggcatgaaccagttcaagcccatcttcctcggcaccg 178 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 364 ggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttc 423 |||||||||||||| || |||||||| || || ||||| | || |||||||| || ||| Sbjct: 244 ggcggcaagcacaatgatcttgacgatgttggcaaggatagctatcaccacacattcttc 303 Query: 424 gagatgctcgggaactggtccttcgg 449 |||||| | || |||||||| ||||| Sbjct: 304 gagatgttgggtaactggtctttcgg 329
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 231 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 ||||||||| ||||| ||||| | |||||||||||||||||||||||| Sbjct: 598556 cgacgacccgacgctgctgttcacgaacgccgggatgaaccagttcaag 598508 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacga 380 ||||||||||||||||||||||| Sbjct: 598444 cgcgccggcggcaagcacaacga 598422
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 406 taccaccacacctttttcgagatgctcgggaactggtccttcgga 450 |||||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 20443459 taccaccacaccttcttcaagatgcttaggaactggtccttcgga 20443415
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 406 taccaccacacctttttcgagatgctcgggaactggtccttcgga 450 |||||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 85883 taccaccacaccttcttcaagatgcttaggaactggtccttcgga 85839
>gb|AY017381.1| Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 328 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 387 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 388 gacgtggg 395 | |||||| Sbjct: 124 gtcgtggg 131
>ref|XM_687602.1| PREDICTED: Danio rerio similar to LOC443692 protein (LOC564258), mRNA Length = 2922 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 405 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 250 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 309 Query: 406 taccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 310 taccatcataccttcttcgagatgctggggaactggtcattcgg 353
>emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 in linkage group 22, complete sequence Length = 221392 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 405 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 45416 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 45357 Query: 406 taccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 45356 taccatcataccttcttcgagatgctggggaactggtcattcgg 45313
>gb|AF332359.1|AF332359 Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 328 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 387 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 388 gacgtggg 395 | |||||| Sbjct: 124 gtcgtggg 131
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 344 cccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||||| || | |||||||||||||||||||||||||| Sbjct: 25552 cccagaagagcgttcgcgccggcggcaagcacaacgacct 25591
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacc 417 |||||||||||||||||||||||||| || |||| || | | || |||||||||| Sbjct: 841512 cgcgccggcggcaagcacaacgacctcgagaacgtcggctacaccgcgcgccaccacacc 841571 Query: 418 tttttcgagatgctcgggaactggtccttcgg 449 || ||||||||||| || |||||||| ||||| Sbjct: 841572 ttcttcgagatgctgggcaactggtcgttcgg 841603
>emb|CR769772.26| Zebrafish DNA sequence from clone CH211-12H2 in linkage group 2, complete sequence Length = 212945 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 405 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 132537 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 132596 Query: 406 taccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 132597 taccatcataccttcttcgagatgctggggaactggtcattcgg 132640
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 379 gaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaac 438 |||||||||||||| || |||||||| |||||||| || || || || ||||| || ||| Sbjct: 731829 gaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgcttggaaac 731770 Query: 439 tggtccttcgg 449 ||||| ||||| Sbjct: 731769 tggtcattcgg 731759
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgaccttgacgacgt 392 |||||||||||||||||||||||||| ||| |||| Sbjct: 160237 cgcgccggcggcaagcacaacgacctcgacaacgt 160203
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 349 aagtgcatccgcgccggcggcaagcacaacgacct 383 |||||| | |||||||||||||||||||||||||| Sbjct: 9744 aagtgcgttcgcgccggcggcaagcacaacgacct 9710 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 ccaccacacctttttcgagatgct 431 |||||||||||| ||||||||||| Sbjct: 9685 ccaccacaccttcttcgagatgct 9662
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 345 ccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 9210 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 9248 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 tgttcgccaacgccgggatgaaccagttcaag 279 ||||| ||||||| || ||||||||||||||| Sbjct: 9128 tgttcaccaacgcgggcatgaaccagttcaag 9159
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 345 ccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||||||| | |||||||| ||||||||||||||||| Sbjct: 4161016 ccagaagtgcgtgcgcgccggtggcaagcacaacgacct 4160978 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 248 tgttcgccaacgccgggatgaaccagttcaag 279 ||||| |||||||||| ||||||||||||||| Sbjct: 4161098 tgttcaccaacgccggcatgaaccagttcaag 4161067 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 ccaccacacctttttcgagatgct 431 |||||||||||| ||||||||||| Sbjct: 4160953 ccaccacaccttcttcgagatgct 4160930
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 345 ccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 12588 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 12626 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 tgttcgccaacgccgggatgaaccagttcaag 279 ||||| ||||||| || ||||||||||||||| Sbjct: 12506 tgttcaccaacgcgggcatgaaccagttcaag 12537
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 2795393 ccaacgccgggatgaaccagttcaag 2795368
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 1179567 cgcgccggcggcaagcacaacgacct 1179542
>gb|BC073734.1| Xenopus laevis hypothetical protein LOC443692, mRNA (cDNA clone IMAGE:5085483), partial cds Length = 4625 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 412 cacacctttttcgagatgctcgggaactggtccttcgg 449 |||||||| || |||||||| ||||||||||||||||| Sbjct: 428 cacaccttctttgagatgcttgggaactggtccttcgg 465
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 906195 cgcgccggcggcaagcacaacgacct 906220
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 408 ccaccacacctttttcgagatgctcgggaactggtccttcgg 449 |||||||||||| ||||| |||||||| |||||||| ||||| Sbjct: 1996654 ccaccacaccttcttcgaaatgctcggcaactggtcgttcgg 1996695 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 ttgctggccaccgccgccgccatcc 55 |||||||| |||||||||||||||| Sbjct: 227048 ttgctggctaccgccgccgccatcc 227072
>ref|XM_742102.1| Aspergillus fumigatus Af293 alanyl-tRNA synthetase (Afu8g03880) partial mRNA Length = 3036 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 405 ||||||||||| || || ||||| || ||||| || | ||||||||||| ||||||| Sbjct: 385 cagaagtgcattcgtgctggcggaaaacacaatgatttggacgacgtgggaaaggacagt 444 Query: 406 taccaccacacctttttcgagatgct 431 |||||||| || || ||||||||||| Sbjct: 445 taccaccatactttcttcgagatgct 470
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 3104360 ccaacgccgggatgaaccagttcaag 3104335
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 2980285 ccaacgccgggatgaaccagttcaag 2980260
>gb|BC097014.1| Danio rerio zgc:113920, mRNA (cDNA clone IMAGE:7448172), complete cds Length = 1983 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 400 gacacgtaccaccacacctttttcgagatg 429 ||| ||||| |||||||| || |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatg 397
>ref|XM_790098.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl tRNA Synthetase (106.8 kD) (ars-2) (LOC590495), partial mRNA Length = 198 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaa 377 |||| ||||||||||||||| ||||| ||||||||||| Sbjct: 76 aacagccagaagtgcatccgtgccggtggcaagcacaa 113
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 1821401 cgcgccggcggcaagcacaacgacct 1821426 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 409 caccacacctttttcgagatgctcgggaact 439 ||||||||||| |||||||||||||| |||| Sbjct: 1821452 caccacaccttcttcgagatgctcggcaact 1821482
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 594316 ccaacgccgggatgaaccagttcaag 594291 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 408 ccaccacacctttttcgagatgctcgggaact 439 |||||| |||||||||||||||||||| |||| Sbjct: 594177 ccaccatacctttttcgagatgctcggcaact 594146
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 3072342 cgcgccggcggcaagcacaacgacct 3072317
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 3479205 cgcgccggcggcaagcacaacgacct 3479180
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 1947055 cgcgccggcggcaagcacaacgacct 1947080 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 cacacctttttcgagatgctcgggaact 439 |||||||| |||||||||||||| |||| Sbjct: 1947109 cacaccttcttcgagatgctcggcaact 1947136 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gcgccggcggcaagcacaac 378 |||||||||||||||||||| Sbjct: 1809835 gcgccggcggcaagcacaac 1809816
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 2819915 ccaacgccgggatgaaccagttcaag 2819890
>ref|NM_001040035.1| Danio rerio zgc:113920 (zgc:113920), mRNA Length = 1983 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 400 gacacgtaccaccacacctttttcgagatg 429 ||| ||||| |||||||| || |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatg 397
>gb|AY994192.1| Cloning vector pSJS1472, complete sequence Length = 9582 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 5270 ccaacgccgggatgaaccagttcaag 5295
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 273291 cgcgccggcggcaagcacaacgacct 273266
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 289268 cgcgccggcggcaagcacaacgacct 289243
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 194225 cgcgccggcggcaagcacaacgacct 194250
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 2820549 ccaacgccgggatgaaccagttcaag 2820524
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 2422314 cgcgccggcggcaagcacaacgacct 2422289 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cgccggcggcaagcacaacg 379 |||||||||||||||||||| Sbjct: 464923 cgccggcggcaagcacaacg 464904
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 364 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 423 Query: 400 gacacgtaccaccacacctttttcgagatg 429 ||| ||||| |||||||| || |||||| Sbjct: 424 gacgtataccatcacaccttctttgagatg 453 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 282 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 259 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 306
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 305 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 364 Query: 400 gacacgtaccaccacacctttttcgagatg 429 ||| ||||| |||||||| || |||||| Sbjct: 365 gacgtataccatcacaccttctttgagatg 394 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 282 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 200 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 247
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgaccttgacgacgtggg 395 ||||||||||||||||||||||| || ||| ||||||| Sbjct: 1319484 cgcgccggcggcaagcacaacgatctcgacaacgtggg 1319521
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 4276034 cgcgccggcggcaagcacaacgacct 4276009
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 583684 cgcgccggcggcaagcacaacgacct 583659
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 412 cacacctttttcgagatgctcgggaactggtccttcgg 449 ||||| ||||||||||||||||| |||||||| ||||| Sbjct: 173098 cacacttttttcgagatgctcggtaactggtcgttcgg 173135 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 ||||| ||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 172936 gacccgacgctgctgttcaccaatgccggtatgaaccagttcaag 172980
>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the complete sequence Length = 10543 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 1904 cgcgccggcggcaagcacaacgacct 1929
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 2790027 ccaacgccgggatgaaccagttcaag 2790002
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 6318206 cgcgccggcggcaagcacaacgacct 6318181
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 1197675 cgcgccggcggcaagcacaacgacct 1197650
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 99718 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 99777 Query: 400 gacacgtaccaccacacctttttcgagatg 429 ||| ||||| |||||||| || |||||| Sbjct: 99778 gacgtataccatcacaccttctttgagatg 99807
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 234 cgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 ||||||||||||| ||||| |||| ||||| ||||| ||||||||| Sbjct: 1322034 cgaccccacgctcatgttcaccaatgccggcatgaatcagttcaag 1322079 Score = 50.1 bits (25), Expect = 0.006 Identities = 70/85 (82%) Strand = Plus / Plus Query: 365 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 424 ||||||||||||||||||| || || || || | ||||| || || || ||| | |||| Sbjct: 1322150 gcggcaagcacaacgacctcgaagaggtaggccatgacacctatcatcataccatgttcg 1322209 Query: 425 agatgctcgggaactggtccttcgg 449 |||||||||| |||||||| ||||| Sbjct: 1322210 agatgctcggcaactggtcgttcgg 1322234
>emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 197426 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||| ||||| || || ||||| |||||||||||||| ||||| | ||| |||||| Sbjct: 181866 aagcacaatgacctggatgatgtgggaaaggacacgtaccatcacacatattttgagatg 181807 Query: 430 ctcgggaactggtc 443 | ||||| ||||| Sbjct: 181806 atggggaattggtc 181793
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 3613113 ccaacgccgggatgaaccagttcaag 3613088
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 410 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 469 Query: 400 gacacgtaccaccacacctttttcgagatg 429 ||| ||||| |||||||| || |||||| Sbjct: 470 gacgtataccatcacaccttctttgagatg 499 Score = 40.1 bits (20), Expect = 6.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 282 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 305 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 352
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||||||||| Sbjct: 1194826 cgcgccggcggcaagcacaacgacct 1194801
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 3545821 ccaacgccgggatgaaccagttcaag 3545796
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 2675665 ccaacgccgggatgaaccagttcaag 2675640
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 2982983 ccaacgccgggatgaaccagttcaag 2982958
>gb|J01581.1|ECOALAS E. coli alaS gene coding for alanyl-tRNA synthetase Length = 3010 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||||||||||||| Sbjct: 359 ccaacgccgggatgaaccagttcaag 384
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 409 caccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||||||||| ||||||||||| ||||||| |||||||| Sbjct: 2184119 caccacaccttcttcgagatgctggggaacttctccttcgg 2184079
>ref|NM_001605.1| Homo sapiens alanyl-tRNA synthetase (AARS), mRNA Length = 3344 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 403 acgtaccaccacacctttttcgagatgct 431 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>gb|AE008829.1| Salmonella typhimurium LT2, section 133 of 220 of the complete genome Length = 20371 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 4186 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 4142
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 124801 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 124757
>gb|AC093491.3| Homo sapiens chromosome 16 clone RP11-410N2, complete sequence Length = 162176 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 135115 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 135174 Query: 403 acgtaccaccacacctttttcgagatgct 431 || || |||||||| ||||||||||| Sbjct: 135175 gtctatcatcacaccttcttcgagatgct 135203
>dbj|AK222824.1| Homo sapiens mRNA for alanyl-tRNA synthetase variant, clone: HEP06614 Length = 3372 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 321 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 380 Query: 403 acgtaccaccacacctttttcgagatgct 431 || || |||||||| ||||||||||| Sbjct: 381 gtctatcatcacaccttcttcgagatgct 409
>gb|AC009060.7|AC009060 Homo sapiens chromosome 16 clone RP11-296I10, complete sequence Length = 180596 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Minus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 178362 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 178303 Query: 403 acgtaccaccacacctttttcgagatgct 431 || || |||||||| ||||||||||| Sbjct: 178302 gtctatcatcacaccttcttcgagatgct 178274
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2789323 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2789279
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 178 acccagaaatgcatccgagctgggggcaagcacaacgacct 218 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 ||||||||||| || |||||||||||||| Sbjct: 85 ttcgccaacgctggcatgaaccagttcaa 113
>gb|BC011451.1| Homo sapiens alanyl-tRNA synthetase, mRNA (cDNA clone MGC:9334 IMAGE:3450606), complete cds Length = 3298 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 256 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 315 Query: 403 acgtaccaccacacctttttcgagatgct 431 || || |||||||| ||||||||||| Sbjct: 316 gtctatcatcacaccttcttcgagatgct 344
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2812658 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2812614
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2928314 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2928270
>dbj|D32050.1|HUMATS Homo sapiens mRNA for alanyl-tRNA synthetase, complete cds Length = 3344 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 343 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 402 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 403 acgtaccaccacacctttttcgagatgct 431 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 364 ggcggcaagcacaacgaccttgacgacgtggg 395 ||||||||||||||||||||||| ||||||| Sbjct: 2398244 ggcggcaagcacaacgaccttgaaaacgtggg 2398275
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 248 tgttcgccaacgccgggatgaaccagttcaag 279 ||||| ||||||| |||||||||||||||||| Sbjct: 4825401 tgttcaccaacgcggggatgaaccagttcaag 4825370 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 345 ccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||| ||| | |||||||||||||||||||| ||||| Sbjct: 4825319 ccagaaatgcgtgcgcgccggcggcaagcacaatgacct 4825281
>ref|XM_532155.2| PREDICTED: Canis familiaris similar to alanyl-tRNA synthetase like (LOC474920), mRNA Length = 2958 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaagcc 281 |||| ||||||||| ||||||||||||||||| Sbjct: 220 ttcgtcaacgccggcatgaaccagttcaagcc 251
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 276 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 2872545 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 2872499
>ref|XM_960604.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 46.1 bits (23), Expect = 0.098 Identities = 77/95 (81%) Strand = Plus / Plus Query: 349 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 408 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 409 caccacacctttttcgagatgctcgggaactggtc 443 |||||||| || || |||||| | || |||||||| Sbjct: 142 caccacactttctttgagatgttgggcaactggtc 176
>ref|XM_331764.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 46.1 bits (23), Expect = 0.098 Identities = 77/95 (81%) Strand = Plus / Plus Query: 349 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 408 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 409 caccacacctttttcgagatgctcgggaactggtc 443 |||||||| || || |||||| | || |||||||| Sbjct: 142 caccacactttctttgagatgttgggcaactggtc 176
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 276 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 26352 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 26306
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 409 caccacacctttttcgagatgct 431 ||||||||||||||||||||||| Sbjct: 1411903 caccacacctttttcgagatgct 1411925
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Minus Query: 230 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 276 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 103364 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 103318
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacga 380 ||||||||||||||||||||||| Sbjct: 3880128 cgcgccggcggcaagcacaacga 3880150
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Minus Query: 403 acgtaccaccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||||||||||||| | ||||| ||||| || |||||||| ||||| Sbjct: 5207769 acgtaccaccacaccatgttcgaaatgctgggcaactggtcattcgg 5207723
>ref|XM_236942.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase like (predicted) (Aarsl_predicted), mRNA Length = 2941 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 296 |||| |||||| || |||||||||||||||||| | ||||| ||||| Sbjct: 205 ttcgtcaacgcaggcatgaaccagttcaagcccatcttcctgggcac 251
>gb|AY142830.1| Heliobacillus mobilis Alanyl-tRNA synthetase gene, partial cds Length = 2649 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 241 acgctcttgttcgccaacgccgggatgaaccagtt 275 ||||| |||||| |||||||||| ||||||||||| Sbjct: 106 acgcttttgttcaccaacgccggcatgaaccagtt 140
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 345 ccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||||||| | || ||||| ||||||||||||||||| Sbjct: 5084075 ccagaagtgcgtgcgtgccggtggcaagcacaacgacct 5084037 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 248 tgttcgccaacgccgggatgaaccagttcaag 279 ||||| ||||||| || ||||||||||||||| Sbjct: 5084157 tgttcaccaacgcaggcatgaaccagttcaag 5084126
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 345 ccagaagtgcatccgcgccggcggcaagcacaacgacct 383 |||||| ||| | ||||| |||||||||||||||||||| Sbjct: 1732602 ccagaaatgcctgcgcgcgggcggcaagcacaacgacct 1732564 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ggccaccgccgccgccatcc 55 |||||||||||||||||||| Sbjct: 135610 ggccaccgccgccgccatcc 135591
>emb|AJ293508.1|GCY293508 Geodia cydonium mRNA for Bcl-x homologous protein (bhp2 gene) Length = 935 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 ccgccgccatccgcctctcctcctcgc 70 |||||||| |||||||||||||||||| Sbjct: 344 ccgccgccgtccgcctctcctcctcgc 318
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 ||||| |||||||||||||||||||| Sbjct: 1524941 cgcgcgggcggcaagcacaacgacct 1524966
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 ||||||||||||||||| |||||||| Sbjct: 166334 cgcgccggcggcaagcataacgacct 166309 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 409 caccacacctttttcgagatgctcgg 434 ||||||||||| |||||||||||||| Sbjct: 166283 caccacaccttcttcgagatgctcgg 166258
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 361 gccggcggcaagcacaacgaccttga 386 |||||||||||||| ||||||||||| Sbjct: 1440642 gccggcggcaagcataacgaccttga 1440667
>emb|X59957.1|RMRECA R.meliloti recA gene and alaS gene 5' end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 2639 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 caccacacctttttcgagatgctcgg 434 ||||||||||| |||||||||||||| Sbjct: 2291 caccacaccttcttcgagatgctcgg 2316 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 ||||||||||||||||| |||||||| Sbjct: 2240 cgcgccggcggcaagcataacgacct 2265
>emb|X59956.1|RLRECA R.leguminosarum recA gene and alaS gene 5'end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 1841 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||| ||||||||||||||||||||| Sbjct: 1443 cgcgtcggcggcaagcacaacgacct 1468
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||| ||||| Sbjct: 921057 cgcgccggcggcaagcacaatgacct 921082
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 352 tgcatccgcgccggcggcaagcacaacgac 381 ||||||||||| || ||||||||||||||| Sbjct: 322375 tgcatccgcgcaggaggcaagcacaacgac 322404
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 408 ccaccacacctttttcgagatgctcgggaa 437 ||||||||||||||| |||||||| ||||| Sbjct: 935207 ccaccacaccttttttgagatgctggggaa 935236 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||| ||||||||||||||| Sbjct: 935068 ccaacgccggcatgaaccagttcaag 935093
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 ||||||||||||||||| |||||||| Sbjct: 47196 cgcgccggcggcaagcataacgacct 47221
>gb|AE012274.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 182 of 460 of the complete genome Length = 10188 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 408 ccaccacacctttttcgagatgctcgggaactggtccttcgg 449 |||||||||||| ||||||||| | || |||||||| ||||| Sbjct: 351 ccaccacaccttcttcgagatgttgggcaactggtcgttcgg 392
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 408 ccaccacacctttttcgagatgctcgggaactgg 441 ||||||||| |||||||||||||| || |||||| Sbjct: 615240 ccaccacacttttttcgagatgctgggcaactgg 615207
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 358 cgcgccggcggcaagcacaacgacct 383 |||||||||||||||||||| ||||| Sbjct: 3251691 cgcgccggcggcaagcacaatgacct 3251666
>gb|AF399933.1|AF399933 Xanthomonas campestris RecA gene cluster, complete sequence Length = 3061 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 408 ccaccacacctttttcgagatgctcgggaactggtccttcgg 449 |||||||||||| ||||||||| | || |||||||| ||||| Sbjct: 2913 ccaccacaccttcttcgagatgttgggcaactggtcgttcgg 2954
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 408 ccaccacacctttttcgagatgctcgggaactggtccttcgg 449 |||||||||||| ||||||||| | || |||||||| ||||| Sbjct: 3038023 ccaccacaccttcttcgagatgttgggcaactggtcgttcgg 3037982
>ref|NM_058880.2| Caenorhabditis elegans Alanyl tRNA Synthetase family member (ars-2) (ars-2) mRNA, complete cds Length = 3472 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 381 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 245 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 286 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaagcc 281 ||||||||||| || |||||||| |||||||| Sbjct: 155 ttcgccaacgcgggaatgaaccaattcaagcc 186
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 cacctttttcgagatgctcgggaact 439 |||||||||||| ||||||||||||| Sbjct: 3369972 cacctttttcgaaatgctcgggaact 3369947
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 84 caccgccaccgcctccgctaccgctaccgt 113 ||||||||||||||||||| ||||| |||| Sbjct: 30577245 caccgccaccgcctccgctgccgctgccgt 30577216
>ref|XM_215718.3| PREDICTED: Rattus norvegicus protein kinase C-like 2 (Prkcl2), mRNA Length = 3816 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 ggccgcctgagccgcgcctgca 340 |||||||||||||||||||||| Sbjct: 186 ggccgcctgagccgcgcctgca 207
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 381 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 10511 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 10552
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 84 caccgccaccgcctccgctaccgctaccgt 113 ||||||||||||||||||| ||||| |||| Sbjct: 75808 caccgccaccgcctccgctgccgctgccgt 75779
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 44.1 bits (22), Expect = 0.39 Identities = 73/90 (81%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 399 ||||| ||||||||||| || ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 243575 aacacacagaagtgcattcgtgccggtggcaaacacaatgacctcgatgatgtgggcaaa 243634 Query: 400 gacacgtaccaccacacctttttcgagatg 429 ||| ||||| |||||||| || |||||| Sbjct: 243635 gacgtataccatcacaccttctttgagatg 243664
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 cacctttttcgagatgctcgggaact 439 |||||||||||| ||||||||||||| Sbjct: 927055 cacctttttcgaaatgctcgggaact 927080
>gb|U41660.1|CEU41660 Caenorhabditis elegans alanyl-tRNA synthetase-like protein AlaRS A mRNA, complete cds Length = 887 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 381 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 240 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 281 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 ttcgccaacgccgggatgaaccagttcaagcc 281 ||||||||||| || |||||||| |||||||| Sbjct: 150 ttcgccaacgcgggaatgaaccaattcaagcc 181
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgacct 383 ||||| |||||||||||||||||||| Sbjct: 20725 cgcgcgggcggcaagcacaacgacct 20750
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 ccaacgccgggatgaaccagttcaag 279 |||||||||||||||| ||||||||| Sbjct: 2830126 ccaacgccgggatgaatcagttcaag 2830151
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 344 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 396 ||||||||||| | || ||||| || |||||||||||||| || |||||||| Sbjct: 232591 cccagaagtgcgtgcgggccggggggaagcacaacgacctggagaacgtgggg 232643 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 279 ||||| |||||| | || ||||| ||||| ||||||||||||||| Sbjct: 232497 gacccgacgctcctttttgccaatgccggcatgaaccagttcaag 232541
>gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 section 2 of 16 of the complete genome Length = 290803 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 275 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 114314 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 114354
>ref|XM_605523.2| PREDICTED: Bos taurus similar to leucine-rich repeats and calponin homology (CH) domain containing 4 (LOC527134), mRNA Length = 2212 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 gccaccgccgccgccatccgc 57 ||||||||||||||||||||| Sbjct: 40 gccaccgccgccgccatccgc 20
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 275 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 992337 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 992377
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 1.5 Identities = 69/85 (81%) Strand = Plus / Minus Query: 365 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 424 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 845829 gcggcaagcacaatgaccttgaagaagtaggacatgatacctaccatcacaccatgttcg 845770 Query: 425 agatgctcgggaactggtccttcgg 449 | ||||| || |||||||| ||||| Sbjct: 845769 aaatgctgggtaactggtcgttcgg 845745
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 275 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 990742 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 990782
>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11 Length = 346357 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 ttcgccaacgccgggatgaaccagttcaa 278 |||||||||||||| ||||| |||||||| Sbjct: 121357 ttcgccaacgccggcatgaatcagttcaa 121329
>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20 Length = 220050 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 235 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 275 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 106242 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 106202
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 409 caccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||||||||| ||||| ||||| || |||||||| ||||| Sbjct: 3141773 caccacaccttcttcgaaatgctaggcaactggtcgttcgg 3141733
>dbj|AK183233.1| Mus musculus cDNA, clone:Y0G0125D01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 347 agaagtgcatccgcgccggcggcaagcacaacgacct 383 |||| |||||||| || || ||||||||||||||||| Sbjct: 182 agaaatgcatccgagctgggggcaagcacaacgacct 218
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 1.5 Identities = 69/85 (81%) Strand = Plus / Minus Query: 365 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 424 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 909185 gcggcaagcacaatgaccttgaagaagtaggacacgatacctaccatcacaccatgttcg 909126 Query: 425 agatgctcgggaactggtccttcgg 449 | ||||| || |||||||| ||||| Sbjct: 909125 aaatgctgggtaactggtcgttcgg 909101
>gb|BT024177.1| Zea mays clone EL01N0320D07 mRNA sequence Length = 1591 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 35 tggccaccgccgccgccatccgcctctcc 63 ||||||||||||||| ||||||| ||||| Sbjct: 61 tggccaccgccgccgacatccgcgtctcc 89
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 409 caccacacctttttcgagatgctcgggaactggtccttcgg 449 ||||||||||| ||||| ||||| || |||||||| ||||| Sbjct: 3149081 caccacaccttcttcgaaatgctaggcaactggtcgttcgg 3149041
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 344 cccagaagtgcatccgcgccggcggcaagcacaacgacct 383 ||||||| ||| | ||||| |||||||||||||| ||||| Sbjct: 2161380 cccagaaatgcgtgcgcgcaggcggcaagcacaatgacct 2161341
>ref|NM_122713.2| Arabidopsis thaliana transcription factor AT5G28300 mRNA, complete cds Length = 2180 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 caccgccaccgcctccgctaccgc 107 ||||||||||||||||||| |||| Sbjct: 232 caccgccaccgcctccgcttccgc 255
>ref|NM_103905.2| Arabidopsis thaliana ALATS (ALANYL-TRNA SYNTHETASE); ATP binding / alanine-tRNA ligase/ nucleic acid binding AT1G50200 (ALATS) mRNA, complete cds Length = 3397 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 403 acgtaccaccacacctttttcgagatgctcgggaactggtcctt 446 |||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 606 acgtaccatcacaccttctttgaaatgcttggtaactggtcctt 649
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tgctggccaccgccgccgcc 51 |||||||||||||||||||| Sbjct: 91441 tgctggccaccgccgccgcc 91460
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 412 cacacctttttcgagatgctcgggaact 439 |||||||| |||||||||||||| |||| Sbjct: 2329820 cacaccttcttcgagatgctcggcaact 2329793
>ref|XM_481977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 390 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ccgccatccgcctctcctcctcgc 70 |||||| ||||||||||||||||| Sbjct: 82 ccgccacccgcctctcctcctcgc 59
>ref|XM_482570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 cgccgccatccgcctctcctcctc 68 |||||||||| ||||||||||||| Sbjct: 447 cgccgccatcagcctctcctcctc 424
>ref|NM_198608.2| Mus musculus alanyl-tRNA synthetase like (Aarsl), mRNA Length = 3368 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 265 atgaaccagttcaagcccgtattcctcggcac 296 |||||||||||||||||| | ||||| ||||| Sbjct: 233 atgaaccagttcaagcccatcttcctgggcac 264
>gb|AC120532.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0054A24 map S1559, complete sequence Length = 69349 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gccaccgccgccgccatccgcctc 60 ||||||||||||||||||| |||| Sbjct: 10574 gccaccgccgccgccatcctcctc 10597
>gb|BC079844.1| Mus musculus alanyl-tRNA synthetase like, mRNA (cDNA clone IMAGE:5687088), partial cds Length = 3340 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 265 atgaaccagttcaagcccgtattcctcggcac 296 |||||||||||||||||| | ||||| ||||| Sbjct: 205 atgaaccagttcaagcccatcttcctgggcac 236
>ref|XM_430000.1| PREDICTED: Gallus gallus LOC422891 (LOC422891), mRNA Length = 1906 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgcctctcctcctcgcgagc 74 |||||||||||||||||||| Sbjct: 489 cgcctctcctcctcgcgagc 470
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ccacacctttttcgagatgc 430 |||||||||||||||||||| Sbjct: 3540550 ccacacctttttcgagatgc 3540569
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 tgttcgccaacgccgggatgaaccagttcaag 279 ||||| ||||||| || ||||||||||||||| Sbjct: 2010546 tgttcaccaacgcaggcatgaaccagttcaag 2010577
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 248 tgttcgccaacgccgggatgaaccagttcaag 279 ||||| ||||||| || ||||||||||||||| Sbjct: 4237620 tgttcaccaacgcaggcatgaaccagttcaag 4237589
>gb|AC114634.14| Mus musculus chromosome 8, clone RP24-116E2, complete sequence Length = 198670 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||||||||||||| |||||| Sbjct: 39607 tcctcgcgagcatctactgtcacc 39584
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 412 cacacctttttcgagatgctcgggaact 439 |||||||| |||||||||||||| |||| Sbjct: 1420501 cacaccttcttcgagatgctcggcaact 1420528 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaa 377 |||||||||||||||||||| Sbjct: 1420447 cgcgccggcggcaagcacaa 1420466
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gccgccgccatccgcctctcctcc 66 ||||||||| |||||||||||||| Sbjct: 3292565 gccgccgccgtccgcctctcctcc 3292588
>ref|XM_752045.1| Ustilago maydis 521 hypothetical protein (UM00991.1) partial mRNA Length = 2313 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 83 tcaccgccaccgcctccgctaccgctaccgtc 114 |||||||||||||| |||| ||||| |||||| Sbjct: 1115 tcaccgccaccgccaccgccaccgccaccgtc 1146
>ref|XM_754485.1| Ustilago maydis 521 hypothetical protein (UM03431.1) partial mRNA Length = 3177 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gtcaccgccaccgcctccgc 101 |||||||||||||||||||| Sbjct: 2985 gtcaccgccaccgcctccgc 2966
>ref|XM_445923.1| Candida glabrata CBS138, CAGL0E05390g partial mRNA Length = 2871 Score = 40.1 bits (20), Expect = 6.1 Identities = 65/80 (81%) Strand = Plus / Plus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 253 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 312 Query: 430 ctcgggaactggtccttcgg 449 | || |||||||||||||| Sbjct: 313 ttgggtaactggtccttcgg 332
>ref|XM_538645.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 1 (LOC481524), mRNA Length = 1775 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 85 accgccaccgcctccgctaccgctaccg 112 ||||||||||| ||||||||||||||| Sbjct: 60 accgccaccgctaccgctaccgctaccg 33
>ref|XM_845859.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 (LOC481524), mRNA Length = 1961 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 85 accgccaccgcctccgctaccgctaccg 112 ||||||||||| ||||||||||||||| Sbjct: 60 accgccaccgctaccgctaccgctaccg 33
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 403 acgtaccaccacacctttttcgagatgctcgggaactggtcctt 446 |||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 79244 acgtaccatcacaccttctttgaaatgcttggtaactggtcctt 79287
>gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper protein Hox9 mRNA, complete cds Length = 3174 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gccaccgccgccgccatccgcctc 60 ||||||||||||||||||| |||| Sbjct: 298 gccaccgccgccgccatcctcctc 275
>gb|AE004140.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 48 of 251 of the complete chromosome Length = 10836 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 356 tccgcgccggcggcaagcacaacgacct 383 ||||||| ||||| |||||||||||||| Sbjct: 6993 tccgcgcgggcggtaagcacaacgacct 7020
>emb|BX321903.4| Mouse DNA sequence from clone RP23-310H10 on chromosome X, complete sequence Length = 71976 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 32558 tcctcgccagcatctacggtcacc 32581
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tgctggccaccgccgccgcc 51 |||||||||||||||||||| Sbjct: 26242 tgctggccaccgccgccgcc 26223
>gb|BT008807.1| Arabidopsis thaliana At1g50200 gene, complete cds Length = 2868 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 403 acgtaccaccacacctttttcgagatgctcgggaactggtcctt 446 |||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 292 acgtaccatcacaccttctttgaaatgcttggtaactggtcctt 335
>ref|XM_970534.1| PREDICTED: Tribolium castaneum similar to CG4633-PA (LOC664536), mRNA Length = 3135 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 346 cagaagtgcatccgcgccggcggcaagcacaacgac 381 |||||||||||||| | ||| ||||| ||||||||| Sbjct: 412 cagaagtgcatccgagtcggaggcaaacacaacgac 447
>gb|BT000461.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 2044 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 caccgccaccgcctccgctaccgc 107 ||||||||||||||||||| |||| Sbjct: 97 caccgccaccgcctccgcttccgc 120
>emb|Z18946.1|MLCGA Mycobacteriophage L5 complete genome Length = 52297 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tgctggccaccgccgccgcc 51 |||||||||||||||||||| Sbjct: 32638 tgctggccaccgccgccgcc 32657
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 6.1 Identities = 65/80 (81%) Strand = Plus / Minus Query: 370 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 429 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 527098 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 527039 Query: 430 ctcgggaactggtccttcgg 449 | || |||||||||||||| Sbjct: 527038 ttgggtaactggtccttcgg 527019
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 gccgccgccatccgcctctcctcc 66 ||||||||| |||||||||||||| Sbjct: 136649 gccgccgccgtccgcctctcctcc 136626
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 344 cccagaagtgcatccgcgccggcggcaagcacaacgacct 383 ||||||| ||| | |||||||||||||| || |||||||| Sbjct: 2832944 cccagaaatgcgtgcgcgccggcggcaaacataacgacct 2832983
>emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 6/7 Length = 326301 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 cgcgccggcggcaagcacaacgac 381 ||||| |||||||||||||||||| Sbjct: 67816 cgcgcaggcggcaagcacaacgac 67839
>gb|BT008649.1| Arabidopsis thaliana clone RAFL09-78-D07 (R19577) At1g50200 mRNA, complete sequence Length = 3295 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 403 acgtaccaccacacctttttcgagatgctcgggaactggtcctt 446 |||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 446 acgtaccatcacaccttctttgaaatgcttggtaactggtcctt 489
>gb|BT008389.1| Arabidopsis thaliana At5g28300 gene, complete cds Length = 1860 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 caccgccaccgcctccgctaccgc 107 ||||||||||||||||||| |||| Sbjct: 50 caccgccaccgcctccgcttccgc 73
>emb|CR556707.4| Mouse DNA sequence from clone RP23-152J21 on chromosome X, complete sequence Length = 215348 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 87674 tcctcgccagcatctacggtcacc 87697
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0047G15, from chromosome 10, complete sequence Length = 166474 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccgccgccgccatccgcctc 60 |||||||||||||||||||| Sbjct: 142584 ccgccgccgccatccgcctc 142565
>gb|DQ417138.1| Ictalurus punctatus clone SBBD12B alanyl-tRNA synthetase-like mRNA, partial cds Length = 349 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aacacccagaagtgcatccg 359 |||||||||||||||||||| Sbjct: 283 aacacccagaagtgcatccg 302
>emb|BX890625.10| Mouse DNA sequence from clone RP23-50A5 on chromosome X, complete sequence Length = 133250 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 125441 tcctcgccagcatctacggtcacc 125464
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 ccaccacacctttttcgagatgct 431 |||||||||||| ||||||||||| Sbjct: 1600518 ccaccacaccttcttcgagatgct 1600495
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gccaccgccgccgccatccgcctc 60 ||||||||||||||||||| |||| Sbjct: 103195 gccaccgccgccgccatcctcctc 103218
>dbj|AK057321.1| Homo sapiens cDNA FLJ32759 fis, clone TESTI2001793, moderately similar to Human B219/OB receptor isoform HuB219.1 precursor mRNA Length = 1763 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 tgctggccaccgccgccgccatcc 55 |||||||| ||||||||||||||| Sbjct: 35 tgctggccgccgccgccgccatcc 12
>dbj|AK146958.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920079I10 product:alanyl-tRNA synthetase like, full insert sequence Length = 3211 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 265 atgaaccagttcaagcccgtattcctcggcac 296 |||||||||||||||||| | ||||| ||||| Sbjct: 233 atgaaccagttcaagcccatcttcctgggcac 264
>dbj|AK167771.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730016H08 product:alanyl-tRNA synthetase like, full insert sequence Length = 3343 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 265 atgaaccagttcaagcccgtattcctcggcac 296 |||||||||||||||||| | ||||| ||||| Sbjct: 228 atgaaccagttcaagcccatcttcctgggcac 259
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 344 cccagaagtgcatccgcgccggcggcaagcacaacgacct 383 ||||||||||| | || ||||| |||||||| |||||||| Sbjct: 1680298 cccagaagtgcgttcgggccggaggcaagcataacgacct 1680259 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gccaccgcctccgctaccgc 107 |||||||||||||||||||| Sbjct: 898909 gccaccgcctccgctaccgc 898890
>emb|CR352323.9| Mouse DNA sequence from clone RP23-470D15 on chromosome X, complete sequence Length = 175748 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 41285 tcctcgccagcatctacggtcacc 41308
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 cggcggcaagcacaacgaccttga 386 |||||| ||||||||||||||||| Sbjct: 1194209 cggcggaaagcacaacgaccttga 1194186
>emb|BX294192.12| Mouse DNA sequence from clone RP23-98M14 on chromosome X, complete sequence Length = 211404 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 44946 tcctcgccagcatctacggtcacc 44969
>gb|AF386963.1|AF386963 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1958 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 caccgccaccgcctccgctaccgc 107 ||||||||||||||||||| |||| Sbjct: 28 caccgccaccgcctccgcttccgc 51
>emb|BX294668.9| Mouse DNA sequence from clone RP23-323B12 on chromosome X, complete sequence Length = 129879 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 59691 tcctcgccagcatctacggtcacc 59668
>emb|BX470213.7| Mouse DNA sequence from clone RP23-169E20 on chromosome X, complete sequence Length = 129107 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 25749 tcctcgccagcatctacggtcacc 25726
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gccaccgccgccgccatccgcctc 60 ||||||||||||||||||| |||| Sbjct: 3828948 gccaccgccgccgccatcctcctc 3828971
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccgccgccgccatccgcctc 60 |||||||||||||||||||| Sbjct: 884976 ccgccgccgccatccgcctc 884957
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 cgccgccatccgcctctcctcctc 68 |||||||||| ||||||||||||| Sbjct: 21148824 cgccgccatcagcctctcctcctc 21148801 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ccgccatccgcctctcctcctcgc 70 |||||| ||||||||||||||||| Sbjct: 16855336 ccgccacccgcctctcctcctcgc 16855313
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gccgccgccatccgcctctcctcc 66 ||||||||| |||||||||||||| Sbjct: 3292676 gccgccgccgtccgcctctcctcc 3292699
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 415 acctttttcgagatgctcgggaactggt 442 ||||| ||||||||||| |||||||||| Sbjct: 17919688 accttcttcgagatgcttgggaactggt 17919715
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cacacctttttcgagatgct 431 |||||||||||||||||||| Sbjct: 393730 cacacctttttcgagatgct 393749
>emb|BX890555.5| Mouse DNA sequence from clone RP23-388H6 on chromosome X, complete sequence Length = 197571 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 135099 tcctcgccagcatctacggtcacc 135076
>emb|BX842562.4| Mouse DNA sequence from clone RP23-269F14 on chromosome X, complete sequence Length = 202480 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 121409 tcctcgccagcatctacggtcacc 121386
>gb|AC018645.4|AC018645 Homo sapiens chromosome 7 clone RP11-225B17, complete sequence Length = 140335 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 tgctggccaccgccgccgccatcc 55 |||||||| ||||||||||||||| Sbjct: 47920 tgctggccgccgccgccgccatcc 47897
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 gccgccgccatccgcctctcctcc 66 ||||||||| |||||||||||||| Sbjct: 117438 gccgccgccgtccgcctctcctcc 117461
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 gtcgcacacgccatggccgt 211 |||||||||||||||||||| Sbjct: 1033181 gtcgcacacgccatggccgt 1033162
>emb|BX890588.3| Mouse DNA sequence from clone RP23-88C4 on chromosome X, complete sequence Length = 239548 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 5814 tcctcgccagcatctacggtcacc 5791
>emb|BX855616.3| Mouse DNA sequence from clone RP23-49L5 on chromosome X, complete sequence Length = 235650 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctcgcgagcatctacggtcacc 87 ||||||| |||||||||||||||| Sbjct: 53135 tcctcgccagcatctacggtcacc 53112
>gb|BT002526.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 3172 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 403 acgtaccaccacacctttttcgagatgctcgggaactggtcctt 446 |||||||| |||||||| || || ||||| || ||||||||||| Sbjct: 431 acgtaccatcacaccttctttgaaatgcttggtaactggtcctt 474
>gb|AF296835.1|T8M17 Arabidopsis thaliana BAC T8M17 Length = 114695 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 caccgccaccgcctccgctaccgc 107 ||||||||||||||||||| |||| Sbjct: 91675 caccgccaccgcctccgcttccgc 91652 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,203,670 Number of Sequences: 3902068 Number of extensions: 3203670 Number of successful extensions: 94397 Number of sequences better than 10.0: 275 Number of HSP's better than 10.0 without gapping: 274 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 86789 Number of HSP's gapped (non-prelim): 7563 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)