ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl29b06 |
|---|---|
| Clone Library Name | barley_pub |
>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9| Length = 556 Score = 38.1 bits (87), Expect = 0.013 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +3 Query: 246 NPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPF 353 +P+G S +SP+G S +P+ T G+ P NNNP+ Sbjct: 118 SPYGNSDSSPYGNASASPYDT--GYNAPLQQNNNPY 151
>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98| kDa nucleoporin) Length = 937 Score = 36.2 bits (82), Expect = 0.049 Identities = 33/91 (36%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Frame = +3 Query: 225 PAMFGANNPFGQS---SASPFGQ------TSTNPFGTQQG--FGQPSTTNNNPFAPKPFX 371 PA A F S SA +GQ TST FGT G FGQ + + F+ KPF Sbjct: 231 PATSSATGLFSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFS-KPFG 289 Query: 372 XXXXXXXXXXXXXXXFGATSTFGQPSAPAFG 464 FG TST GQPS G Sbjct: 290 QATTTPNTGFS----FGNTSTLGQPSTNTMG 316
>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor| [Contains: Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore complex protein Nup96 (Nucleoporin Nup96) (96 kDa nucleoporin)] Length = 1729 Score = 35.4 bits (80), Expect = 0.084 Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +3 Query: 252 FGQSSASPFGQTSTNPFGTQQG--FGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGA 425 +GQ+ + FG TST FGT G FGQ + + F+ KPF FG Sbjct: 252 YGQNKTA-FG-TSTTGFGTNPGGLFGQQNQQTTSLFS-KPFGQATTTQNTGFS----FGN 304 Query: 426 TSTFGQPSAPAFG 464 TST GQPS G Sbjct: 305 TSTIGQPSTNTMG 317
>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I| Length = 598 Score = 34.7 bits (78), Expect = 0.14 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = +3 Query: 234 FGANNPFGQ--SSASPFGQTSTNPFGTQQGFGQPSTT--NNNPFAPKPFXXXXXXXXXXX 401 F P GQ S+A+ G T+T+ GT FG+P+TT N P AP Sbjct: 270 FSFGKPAGQAASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDN 329 Query: 402 XXXXXFGATS 431 FG TS Sbjct: 330 KPTFSFGNTS 339
>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein| NUP116/NSP116) Length = 1113 Score = 34.3 bits (77), Expect = 0.19 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Frame = +3 Query: 228 AMFGANNPFGQSSASPFGQTSTNPFGTQQG--FGQPSTTNNNPFAPKPFXXXXXXXXXXX 401 ++FG NN QS+ FGQ N +Q G FGQ + NN PF Sbjct: 468 SIFGQNNQQQQSTGGLFGQ-QNNQSQSQPGGLFGQTNQNNNQPFGQNGLQQPQQNNSLFG 526 Query: 402 XXXXXFGATSTF 437 FG TS F Sbjct: 527 AKPTGFGNTSLF 538
>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1154 Score = 34.3 bits (77), Expect = 0.19 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNPS 369 P P+GP A +PAP T P+HP+P+ Sbjct: 250 PAPAGPAPAGPAPAPETNAPNHPSPA 275
>ESAM_HUMAN (Q96AP7) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 33.9 bits (76), Expect = 0.24 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +1 Query: 262 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 H P G PTPS ++AL SP PTT +HP P Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQP 357
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 32.7 bits (73), Expect = 0.54 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 298 PSGPNRALASPAPPTTIPSHPNPS 369 PSGP A +PAP T P+HP+P+ Sbjct: 246 PSGPAPAGPAPAPETNAPNHPSPA 269
>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein homolog) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 960 Score = 32.3 bits (72), Expect = 0.71 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +1 Query: 289 QPTPSGPNRALASPAPPTTIPSHPNPS 369 +P P GP R + P PPT IP P PS Sbjct: 124 EPHPEGPQRLRSDPGPPTEIPG-PRPS 149
>UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 638 Score = 32.0 bits (71), Expect = 0.93 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 5/82 (6%) Frame = +3 Query: 222 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNN-----NPFAPKPFXXXXXX 386 +P + A FG + + G +ST+ GT QPS T N NP+AP P Sbjct: 288 EPMLNAAQEQFGGNPFATVGSSSTSGEGT-----QPSRTENRDPLPNPWAPPPTTQTAAT 342 Query: 387 XXXXXXXXXXFGATSTFGQPSA 452 G+ S+ +A Sbjct: 343 TTTTTTTSSGSGSGSSSSSTTA 364
>LRP2_HHV1F (P17589) Latency-related protein 2| Length = 107 Score = 32.0 bits (71), Expect = 0.93 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +1 Query: 229 PCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSA 372 P + H SH P L R PTP+ P+ + A P P T P+HP+ A Sbjct: 6 PRTPTPTHPHSHAPPL--PRTPTPAHPH-SHAPPLPRTPTPTHPHSHA 50
>ESAM_MACFA (Q95KI3) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 31.2 bits (69), Expect = 1.6 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +1 Query: 262 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 H P G PTPS ++AL SP PTT ++P P Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGANPQP 357
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 31.2 bits (69), Expect = 1.6 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +3 Query: 234 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQ-PSTTN-NNPFAPKP 365 F +N GQ ++P + NPF + QG GQ PS +N P P+P Sbjct: 162 FASNQGMGQRPSAP--RPGNNPFSSSQGMGQRPSPSNIPRPAPPRP 205
>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I| Length = 1325 Score = 30.8 bits (68), Expect = 2.1 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = +3 Query: 222 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQG---FGQPSTTNNNPFAPKPFXXXXXXXX 392 Q + FG N FGQ+++ G ++ G + FGQPST P +P Sbjct: 484 QSSAFG-NFKFGQATSFDKGLSTDASSGAKSNTPVFGQPSTFGQAPVFGQP--------- 533 Query: 393 XXXXXXXXFGATSTFGQPSA 452 FG FGQPSA Sbjct: 534 ------SAFGQAPVFGQPSA 547
>TMG4_HUMAN (Q9BZD6) Transmembrane gamma-carboxyglutamic acid protein 4| precursor (Proline-rich Gla protein 4) (Proline-rich gamma-carboxyglutamic acid protein 4) Length = 226 Score = 30.8 bits (68), Expect = 2.1 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 220 INQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPT 342 + PCS+ G H P+++ RR P A SP PP+ Sbjct: 146 LQHPCSSAVYERGRHTPSIIFRR------PEEAALSPLPPS 180
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 30.8 bits (68), Expect = 2.1 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +1 Query: 289 QPTPSGPNRALASPAPPTTIPS-HPNP 366 +P P GP R + P PPT PS P+P Sbjct: 124 EPHPEGPQRLRSDPGPPTETPSQRPSP 150
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 30.8 bits (68), Expect = 2.1 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +1 Query: 202 AAAATTINQPCSALTIHSGSHLPALLGRRQP--TPSGPNRALASPAPPTTIPSHPNPSAA 375 AAA ++ P +++ S + P L QP TPS L APP P P P+ A Sbjct: 267 AAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQA 326
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNP 366 P+P+ P+ A SPAPP+ P P P Sbjct: 46 PSPAPPSPAPPSPAPPSPAPPSPGP 70 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 268 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 PA P+P+ P+ A SPAPP+ P P P Sbjct: 86 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 118 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 268 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 PA P+P+ P+ A SPAPP+ P P P Sbjct: 81 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 113 Score = 29.6 bits (65), Expect = 4.6 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNP 366 P+P+ P+ A SPAPP+ P P P Sbjct: 79 PSPAPPSPAPPSPAPPSPAPPSPAP 103 Score = 29.6 bits (65), Expect = 4.6 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNP 366 P+P+ P+ A SPAPP+ P P P Sbjct: 41 PSPAPPSPAPPSPAPPSPAPPSPAP 65 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +1 Query: 205 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 A + N C I + PA P+P+ P+ A SPAPP+ P P P Sbjct: 22 AFVASANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAP 75 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +1 Query: 268 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 375 PA P+P+ P+ A SPAPP+ P P PS A Sbjct: 91 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSP-PSPA 125
>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 897 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = +3 Query: 234 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPST---TNNNPFAP 359 F ++ F Q+S PF +ST+PF S +N+PFAP Sbjct: 653 FASDCFFKQTSTDPFTTSSTDPFSASSNSSNTSVETWKHNDPFAP 697
>TFE2_RAT (P21677) Transcription factor E2-alpha (Immunoglobulin| enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Transcription regulator Pan) Length = 649 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = +1 Query: 208 AATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 375 A T + S T+ LP LG P P P+ +S T+ PS+P AA Sbjct: 108 AYATFGRDTSVGTLSQAGFLPGELGLSSPGPLSPSGVKSSSQYYTSFPSNPRRRAA 163
>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)| Length = 1778 Score = 30.0 bits (66), Expect = 3.5 Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 15/92 (16%) Frame = +3 Query: 234 FGANNP-----FGQSSASP----FGQTSTNPFGTQQGFGQP---STTNNNPFAPKPFXXX 377 FG NN FG +S +P FG +T+ G Q QP S TN F + Sbjct: 17 FGQNNQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFGSNTNGGLFGNR----- 71 Query: 378 XXXXXXXXXXXXXFG---ATSTFGQPSAPAFG 464 FG T FGQ + PAFG Sbjct: 72 ---NNTTTTGGTGFGMSSGTGMFGQSNTPAFG 100
>UBAP1_RAT (Q5XIS7) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 30.0 bits (66), Expect = 3.5 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +1 Query: 235 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPS 354 SAL ++SG+ +PAL + P+ S + +PP+T P+ Sbjct: 322 SALNLNSGTEVPALTSSQMPSLSILSVCTEESSPPSTCPT 361
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 17/91 (18%) Frame = +3 Query: 252 FGQSSASPFGQTSTNPFGTQ---QGFG--------QPSTTNNNPFAPKPFXXXXXXXXXX 398 +GQSS S +GQ+ +GTQ QG+G Q S ++ + P Sbjct: 50 YGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSST 109 Query: 399 XXXXXXFGATSTFGQPSA------PAFGAHQ 473 +S++GQP + P++G Q Sbjct: 110 SGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQ 140
>SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9| Length = 490 Score = 30.0 bits (66), Expect = 3.5 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 8/46 (17%) Frame = +3 Query: 240 ANNPFGQSS--ASPFGQ------TSTNPFGTQQGFGQPSTTNNNPF 353 ANNP+G + AS G+ T TNP+G + G+ S + NP+ Sbjct: 111 ANNPYGNGNVGASSRGERAGGRNTQTNPYGGARASGRASGSKPNPY 156
>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) (Protein G3) Length = 1132 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNPS 369 P P+GP +PAP T P+HP+P+ Sbjct: 254 PAPAGP-----TPAPETNAPNHPSPA 274
>CAP8_ARATH (Q8LBH2) Putative clathrin assembly protein At2g01600| Length = 571 Score = 29.6 bits (65), Expect = 4.6 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 15/58 (25%) Frame = +3 Query: 225 PAMFGANNPFGQSSAS---PFGQTSTNPFG------------TQQGFGQPSTTNNNPF 353 P F +++PF S+ + P Q NPFG T Q P T N+NPF Sbjct: 476 PNPFASHDPFASSNGTAPPPQQQAVNNPFGAYQQTYQHQPQPTYQHQSNPPTNNSNPF 533
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 29.6 bits (65), Expect = 4.6 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = +1 Query: 205 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSG-PNRALASPAPPTTIPSHPNPSAA 375 ++A N P + TI + +P+ L P PS PN ++ASPA P + S+P+ + A Sbjct: 344 SSAGKTNPPVNP-TIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPA 400
>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)| Length = 244 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +1 Query: 259 SHLPALLGRRQPTPSGPNRA--LASPAPPTTIPSHPNPSAA 375 S P L +QP+P P + + SPA PTTIPS P++A Sbjct: 17 SQQPFLQQPQQPSPQ-PQQVVQIISPATPTTIPSAGKPTSA 56
>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor| (Salivary protein MSG1) Length = 147 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Frame = +1 Query: 277 LGRRQPTPSGPNRALASPAPP-TTIPSHPNP 366 +GR P P GP P PP +P HP P Sbjct: 58 IGRPPPPPFGPGIGRPPPPPPCPPVPPHPRP 88
>UBQL2_HUMAN (Q9UHD9) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (hPLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 624 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%) Frame = +3 Query: 222 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNN-----NPFAPKPFXXXXXX 386 +P + A FG + + G +S++ GTQ PS T N NP+AP P Sbjct: 277 EPMLNAAQEQFGGNPFASVGSSSSSGEGTQ-----PSRTENRDPLPNPWAPPPATQSSAT 331 Query: 387 XXXXXXXXXXFGATST 434 G +S+ Sbjct: 332 TSTTTSTGSGSGNSSS 347
>UBAP1_HUMAN (Q9NZ09) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +1 Query: 235 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPS 369 SAL + SG+ +PAL + P+ S + +PP T P+ P+ Sbjct: 322 SALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGPTVTPPN 366
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 6.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNP 366 P P+GP A P P ++ PS PNP Sbjct: 1722 PMPAGPPSAPPPPLPASSAPSVPNP 1746
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPS---HPNPSAA 375 P P GP A AS APPT P P P++A Sbjct: 37 PPPPGPGAASASAAPPTASPGPERKPPPASA 67
>TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily m Length = 282 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 265 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 +P G+R+P P P P PPT +PS P P Sbjct: 36 VPGRPGQRRPPPPPP----PPPPPPTLLPSRPLP 65
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 29.3 bits (64), Expect = 6.0 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 222 QPA-MFGANNPFGQSSASPFG-QTSTNPFGTQQGFGQPSTTNNNP 350 QPA MFG + P SSA FG Q+ TNP G +T NNP Sbjct: 1007 QPASMFGTSTP-APSSAFAFGNQSGTNPAAPAGFGGITNTATNNP 1050
>AMPH_CHICK (P50478) Amphiphysin| Length = 682 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNPSAA 375 P+ SGP R +P+PP + P+P+A+ Sbjct: 249 PSDSGPLRIAKTPSPPEEVSPLPSPTAS 276
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +1 Query: 292 PTPSGPNRALASPAPPTTIPSHPNPS 369 P PSGP A A P PP P P PS Sbjct: 550 PLPSGPAYASALPPPPGPPPPPPLPS 575
>TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) (Apoptosis antigen ligand) (APTL) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor Length = 281 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 265 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 +P G+R+P P P L P PP +P P P Sbjct: 36 VPRRPGQRRPPPPPPPPPLPPPPPPPPLPPLPLP 69
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +1 Query: 268 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 366 P + P PS P S APP PS P P Sbjct: 272 PPSQNSKPPVPSTPRPGAGSQAPPPPPPSRPGP 304
>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) Length = 907 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 273 PFGQTSTNPFGTQQGFGQPSTTNNNPFAP 359 P G S PF ++GFG P + +PFAP Sbjct: 814 PLGADSGEPFQNKKGFGDP-FSGKDPFAP 841
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 240 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAP 359 A+ P P G S +PF +++GFG P + +PF P Sbjct: 805 ADFPEAPDPFQPLGADSGDPFQSKKGFGDP-FSGKDPFVP 843 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.126 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,254,857 Number of Sequences: 219361 Number of extensions: 879577 Number of successful extensions: 3524 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 2906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3474 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
