Clone Name | bastl29b01 |
---|---|
Clone Library Name | barley_pub |
>emb|AL357503.12| Human DNA sequence from clone RP5-899C14 on chromosome 20 Contains the 3' end of the C20orf101 gene, complete sequence Length = 133288 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 420 gcagcagcgtggtcatgcctc 440 ||||||||||||||||||||| Sbjct: 24608 gcagcagcgtggtcatgcctc 24588
>ref|XM_788353.1| PREDICTED: Strongylocentrotus purpuratus similar to Ras interacting protein 1 (LOC588682), partial mRNA Length = 2244 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 caaggaagtggaggctgcatt 467 ||||||||||||||||||||| Sbjct: 819 caaggaagtggaggctgcatt 839
>ref|XM_778140.1| PREDICTED: Strongylocentrotus purpuratus similar to myosin phosphatase-Rho interacting protein (LOC577942), mRNA Length = 4815 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 caaggaagtggaggctgcatt 467 ||||||||||||||||||||| Sbjct: 2898 caaggaagtggaggctgcatt 2918
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 cgggcgcgatgaggatggtga 272 ||||||||||||||||||||| Sbjct: 235293 cgggcgcgatgaggatggtga 235273
>emb|BX294019.1|NC100H1 Neurospora crassa DNA linkage group V Cosmid contig 100H1 Length = 77124 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 gatagcagtagcgcgatgcag 310 ||||||||||||||||||||| Sbjct: 68492 gatagcagtagcgcgatgcag 68512
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gggcaactcgtcttcgcgctc 169 ||||||||||||||||||||| Sbjct: 2587353 gggcaactcgtcttcgcgctc 2587333
>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of Podospora anserina Length = 101256 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 cgggcgcgatgaggatggtga 272 ||||||||||||||||||||| Sbjct: 86902 cgggcgcgatgaggatggtga 86922
>ref|XM_479825.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2841 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggtctgatcttgcggaaacagca 336 |||||||||||||| ||||||||| Sbjct: 2535 tggtctgatcttgcagaaacagca 2512
>ref|XM_609623.2| PREDICTED: Bos taurus similar to Galectin-3 binding protein precursor (Lectin galactoside-binding soluble 3 binding protein) (Mac-2 binding protein) (Mac-2 BP) (MAC2BP) (Tumor-associated antigen 90K) (LOC531137), mRNA Length = 2381 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcccacaaggaagtggaggc 461 |||||||||||||||||||| Sbjct: 1134 tcccacaaggaagtggaggc 1153
>ref|XM_449870.1| Candida glabrata CBS138 hypothetical protein (CAGL0M12144g) partial mRNA Length = 2916 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 ccacaaggaagtggaggctgcatt 467 ||||||||||||| |||||||||| Sbjct: 1992 ccacaaggaagtgaaggctgcatt 2015
>gb|BC105367.1| Bos taurus similar to Galectin-3 binding protein precursor (Lectin galactoside-binding soluble 3 binding protein) (Mac-2 binding protein) (Mac-2 BP) (MAC2BP) (Tumor-associated antigen 90K), mRNA (cDNA clone MGC:127786 IMAGE:7954620), complete cds Length = 2400 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcccacaaggaagtggaggc 461 |||||||||||||||||||| Sbjct: 1058 tcccacaaggaagtggaggc 1077
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 ccacaaggaagtggaggctgcatt 467 ||||||||||||| |||||||||| Sbjct: 1213244 ccacaaggaagtgaaggctgcatt 1213267
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggtctgatcttgcggaaacagca 336 |||||||||||||| ||||||||| Sbjct: 1109129 tggtctgatcttgcagaaacagca 1109106
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggtctgatcttgcggaaacagca 336 |||||||||||||| ||||||||| Sbjct: 22366 tggtctgatcttgcagaaacagca 22343
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggtctgatcttgcggaaacagca 336 |||||||||||||| ||||||||| Sbjct: 137656 tggtctgatcttgcagaaacagca 137633
>dbj|AK103562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132K03, full insert sequence Length = 2839 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 tggtctgatcttgcggaaacagca 336 |||||||||||||| ||||||||| Sbjct: 2533 tggtctgatcttgcagaaacagca 2510 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,388,654 Number of Sequences: 3902068 Number of extensions: 2388654 Number of successful extensions: 43350 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43297 Number of HSP's gapped (non-prelim): 53 length of query: 471 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 449 effective length of database: 17,147,199,772 effective search space: 7699092697628 effective search space used: 7699092697628 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)