ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl29a08 |
|---|---|
| Clone Library Name | barley_pub |
>SENP7_HUMAN (Q9BQF6) Sentrin-specific protease 7 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP7) (SUMO-1-specific protease 2) Length = 984 Score = 40.8 bits (94), Expect(2) = 6e-08 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = +3 Query: 183 VIYPKGDPDA-VSISSRDVDLLLPETFVNDTIIDFYIKYLSTRMKTTEKCKXXXXXXX-- 353 ++YP + +++ D++ L F+ND IIDFY+KYL + E + Sbjct: 683 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFF 742 Query: 354 ---XXRKLADLDKDQGRAPEGRSAFLRVRKWTR 443 RK +L +D + RVR WTR Sbjct: 743 YKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTR 775 Score = 34.7 bits (78), Expect(2) = 6e-08 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 Query: 446 INIFAKDFLFIPVNFSLHW 502 INIF KD++F+PVN S HW Sbjct: 777 INIFNKDYIFVPVNESSHW 795
>ULP2_SCHPO (O13769) Ubiquitin-like-specific protease 2 (EC 3.4.22.-)| Length = 652 Score = 46.2 bits (108), Expect(2) = 2e-07 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Frame = +3 Query: 183 VIYPKGDPDAVSISSRDVDLLLPETFVNDTIIDFYIKYLSTRMKTTEKC---KXXXXXXX 353 ++YP ++++I++ D+ L F+NDTI+DFY++YL +++T Sbjct: 351 LVYPFSGTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTF 410 Query: 354 XXRKLADLDKDQGRAPEGRSAFLRVRKWTRK 446 +L DKD G+ R VRKWT+K Sbjct: 411 FYNRLTSKDKD-GK----RLGHRGVRKWTQK 436 Score = 27.7 bits (60), Expect(2) = 2e-07 Identities = 7/20 (35%), Positives = 15/20 (75%) Frame = +2 Query: 443 KINIFAKDFLFIPVNFSLHW 502 K+++F K ++ +P+N + HW Sbjct: 436 KVDLFHKKYIIVPINETFHW 455
>ULP1_YEAST (Q02724) Ubiquitin-like-specific protease 1 (EC 3.4.22.-)| Length = 621 Score = 35.8 bits (81), Expect = 0.067 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +3 Query: 207 DAVSISSRDVDLLLPETFVNDTIIDFYIKYLSTRMKTT 320 D + I+ RD L P ++NDTII+F++KY+ T Sbjct: 431 DNIEITVRDFKTLAPRRWLNDTIIEFFMKYIEKSTPNT 468
>SENP6_HUMAN (Q9GZR1) Sentrin-specific protease 6 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP6) (SUMO-1-specific protease 1) Length = 1112 Score = 35.4 bits (80), Expect = 0.088 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +3 Query: 183 VIYPKGDPDA-VSISSRDVDLLLPETFVNDTIIDFYIKYL 299 ++YP +S+++ D+ L F+ND IIDFY+KYL Sbjct: 655 IVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYL 694 Score = 32.0 bits (71), Expect = 0.97 Identities = 10/19 (52%), Positives = 16/19 (84%) Frame = +2 Query: 446 INIFAKDFLFIPVNFSLHW 502 ++IF KDF+F+P+N + HW Sbjct: 748 VDIFEKDFIFVPLNEAAHW 766
>SENT_CAEEL (Q09353) Probable sentrin-specific protease (EC 3.4.22.-)| Length = 697 Score = 28.9 bits (63), Expect(2) = 0.11 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +2 Query: 443 KINIFAKDFLFIPVNFSLHW 502 K++IFA D + +PV+ +HW Sbjct: 567 KVDIFAFDIVLVPVHLGMHW 586 Score = 25.0 bits (53), Expect(2) = 0.11 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +3 Query: 201 DPDAVSISSRDVDLLLPETFVNDTIIDFYIKYLSTRMKTTEK 326 D ++ I +D+ L ++ND II+FY++ + R K Sbjct: 497 DAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGDSK 538
>HEP2_HUMAN (P05546) Heparin cofactor 2 precursor (Heparin cofactor II) (HC-II)| (Protease inhibitor leuserpin 2) (HLS2) Length = 499 Score = 32.7 bits (73), Expect = 0.57 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +3 Query: 15 DPQWPRKQEKICHMALRYRDIW-NNTPSEDFALENRSTDPSLFFPKQYFSGIDDFEDVIY 191 DPQW + K M L D NT + D+ E D L K FS DD+ D++ Sbjct: 39 DPQWEQLNNKNLSMPLLPADFHKENTVTNDWIPEGEEDDDYLDLEK-IFSEDDDYIDIV- 96 Query: 192 PKGDPDAVSISSRDVDL 242 D++S+S D D+ Sbjct: 97 -----DSLSVSPTDSDV 108
>HTPG_BUCBP (Q89A93) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 626 Score = 32.0 bits (71), Expect = 0.97 Identities = 17/89 (19%), Positives = 41/89 (46%) Frame = +3 Query: 60 LRYRDIWNNTPSEDFALENRSTDPSLFFPKQYFSGIDDFEDVIYPKGDPDAVSISSRDVD 239 +R+ + NNT +LEN + K YF D++ + P +++D Sbjct: 401 IRFSSLLNNTQKPTMSLENYVKNMKQNQEKIYFITADNYASAV---SSPHLEFFKKKNID 457 Query: 240 LLLPETFVNDTIIDFYIKYLSTRMKTTEK 326 +L+ +++ ++++ I+Y + ++ K Sbjct: 458 VLILSDKIDEWMMNYLIEYNEKKFQSVSK 486
>LTBP1_RAT (Q00918) Latent transforming growth factor beta-binding protein 1| precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta-1-BP-1) (Transforming growth factor beta-1-masking protein, large subunit) Length = 1712 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = -3 Query: 444 FGSTCGHVKKLIYPLELSLDLCQDQPACEKRSY*RSGTCTSLWSSFLCL 298 F TCG Y L + D C+D CE R G C + SF CL Sbjct: 1093 FRCTCGQG----YQLSAAKDQCEDIDECEHRHLCSHGQCRNTEGSFQCL 1137
>ULP2_YEAST (P40537) Ubiquitin-like-specific protease 2 (EC 3.4.22.-)| Length = 1034 Score = 30.4 bits (67), Expect = 2.8 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = +3 Query: 63 RYRDIWN----NTPSEDFALENRSTDPSLFFPKQYFSGIDDFEDVIYPKGDPDAVSISSR 230 R++D+ + N+ SE P LF P + Y D + +I+++ Sbjct: 399 RFKDVSDPANSNSNSEFDDATTEFETPELFKPS-----------LCYKFNDGSSYTITNQ 447 Query: 231 DVDLLLPETFVNDTIIDFYIKY 296 D L + +VND+I+DF+ K+ Sbjct: 448 DFKCLFNKDWVNDSILDFFTKF 469
>LTB1L_HUMAN (Q14766) Latent transforming growth factor beta-binding protein,| isoform 1L precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1) Length = 1595 Score = 29.3 bits (64), Expect = 6.3 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = -3 Query: 444 FGSTCGHVKKLIYPLELSLDLCQDQPACEKRSY*RSGTCTSLWSSFLCL 298 F TCG Y L + D C+D C+ R G C + SF C+ Sbjct: 975 FRCTCGQG----YQLSAAKDQCEDIDECQHRHLCAHGQCRNTEGSFQCV 1019
>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3| precursor (LTBP-3) Length = 1302 Score = 29.3 bits (64), Expect = 6.3 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 420 KKLIYPLELSLDLCQDQPACEKRSY*RSGTCTSLWSSFLC 301 ++ + P E+ +D CQD AC R G C +L S+ C Sbjct: 1072 RQCLSPEEMDVDECQDPAAC------RPGRCVNLPGSYRC 1105
>RIPK5_CHICK (Q6XUX0) Receptor-interacting serine/threonine-protein kinase 5 (EC| 2.7.11.1) (Dusty protein kinase) (Dusty PK) Length = 930 Score = 29.3 bits (64), Expect = 6.3 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = +3 Query: 33 KQEKICHMALRYRDIWNNTPSEDFALENRSTDPS 134 +Q ++ HM +R W+ P ED + S DP+ Sbjct: 158 EQYELVHMMAAHRGHWDTIPEEDLEIRGDSEDPA 191
>LTB1S_HUMAN (P22064) Latent transforming growth factor beta-binding protein,| isoform 1S precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1) Length = 1394 Score = 29.3 bits (64), Expect = 6.3 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = -3 Query: 444 FGSTCGHVKKLIYPLELSLDLCQDQPACEKRSY*RSGTCTSLWSSFLCL 298 F TCG Y L + D C+D C+ R G C + SF C+ Sbjct: 774 FRCTCGQG----YQLSAAKDQCEDIDECQHRHLCAHGQCRNTEGSFQCV 818 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,539,795 Number of Sequences: 219361 Number of extensions: 1335673 Number of successful extensions: 3574 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3574 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
