Clone Name | bastl29a07 |
---|---|
Clone Library Name | barley_pub |
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD| delta) Length = 868 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/31 (70%), Positives = 27/31 (87%) Frame = +3 Query: 252 VLLHGDLDLWVLEARLLPNMDMLSEHIRRCF 344 +LLHGDLDL +++AR LPNMDM SEH+RR F Sbjct: 10 MLLHGDLDLKIVKARRLPNMDMFSEHLRRLF 40
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = +3 Query: 225 DESPSPPKPVLLHGDLDLWVLEARLLPNMD 314 D S + LLHG+LD+WV EA+ LPNMD Sbjct: 33 DTSSGSLRVELLHGNLDIWVKEAKHLPNMD 62
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 37.0 bits (84), Expect = 0.012 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +3 Query: 255 LLHGDLDLWVLEARLLPNMD 314 LLHG+LD+WV EA+ LPNMD Sbjct: 39 LLHGNLDIWVKEAKHLPNMD 58
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 36.6 bits (83), Expect = 0.016 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +3 Query: 246 KPVLLHGDLDLWVLEARLLPNMDMLSEHIRRCF 344 K +L HG+LD+W+ A+ LPNMDM + + F Sbjct: 150 KVLLSHGNLDIWIYHAKNLPNMDMFHKTLGDMF 182
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +3 Query: 246 KPVLLHGDLDLWVLEARLLPNMDM 317 K +LLHG+LD+WV A LPN+D+ Sbjct: 111 KVLLLHGNLDIWVSCANNLPNLDL 134
>ISPH_THET8 (Q5SMC8) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 340 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -3 Query: 317 HVHVGQQPRLEDPE-VEVPVQE 255 H HVG+ PRL DP VEVP E Sbjct: 161 HTHVGKDPRLADPRTVEVPDPE 182
>ISPH_THET2 (Q72G65) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 340 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -3 Query: 317 HVHVGQQPRLEDPE-VEVPVQE 255 H HVG+ PRL DP VEVP E Sbjct: 161 HTHVGKDPRLADPRTVEVPDPE 182
>PROA_XYLFT (Q87EK9) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 425 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +3 Query: 270 LDLWVLEARLLPNMDMLSEHIRR 338 LDL +L R++PN+D EHIRR Sbjct: 312 LDL-ILAIRIVPNLDAALEHIRR 333 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.117 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,768,311 Number of Sequences: 219361 Number of extensions: 192727 Number of successful extensions: 744 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 739 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 744 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits)