ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl29a04 |
|---|---|
| Clone Library Name | barley_pub |
>CENPE_HUMAN (Q02224) Centromeric protein E (CENP-E protein)| Length = 2663 Score = 36.2 bits (82), Expect = 0.054 Identities = 20/60 (33%), Positives = 32/60 (53%) Frame = +3 Query: 333 IQVLVRVRPLSDKEIARGEPAEWECINDTTIMFRSTFPERPTAPTAYTFDRVFHSECSTK 512 + V VRVRPL+ +E + GE A+ D +++ + ++ FDRVFH +TK Sbjct: 7 VAVCVRVRPLNSREESLGETAQVYWKTDNNVIY------QVDGSKSFNFDRVFHGNETTK 60
>ZN575_MACFA (Q9GM03) Zinc finger protein 575| Length = 260 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/63 (31%), Positives = 26/63 (41%) Frame = -3 Query: 456 WVVPGRYSET*WWCH*CTPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHS 277 W++PG + + C P P PLQ P S P+ + P RR PPQ Sbjct: 29 WLLPGAHQPS------CPPAPHQGPLQKPSQSAPGPTASASAPP----RPRRRPPPQRPH 78 Query: 276 SCP 268 CP Sbjct: 79 RCP 81
>FLA10_CHLRE (P46869) Kinesin-like protein FLA10 (KHP1 protein)| Length = 786 Score = 35.0 bits (79), Expect = 0.12 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +3 Query: 300 GGGSGAGSLDRIQVLVRVRPLSDKEIARGEPAEWECINDT-TIMFRSTFPERPTAPTAYT 476 GGGS + ++V+VR RPL+ KE A G + D + R+ + P A+T Sbjct: 5 GGGS-----ESVKVVVRCRPLNGKEKADGRSRIVDMDVDAGQVKVRNPKADASEPPKAFT 59 Query: 477 FDRVFHSECSTK 512 FD+V+ C + Sbjct: 60 FDQVYDWNCQQR 71
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 34.7 bits (78), Expect = 0.16 Identities = 20/58 (34%), Positives = 25/58 (43%) Frame = -3 Query: 396 PQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAPP 223 P P+ SP SPSP P P F SPP +S P + SP ++PP Sbjct: 292 PPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPIYSPP 349
>LRIG2_MOUSE (Q52KR2) Leucine-rich repeats and immunoglobulin-like domains| protein 2 precursor Length = 1054 Score = 33.9 bits (76), Expect = 0.27 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +3 Query: 285 AEVVNGGGSGAGSLDRIQVLVRVRPLSDKEIARGEPAEWECI 410 A+ + GG S SL ++ +RPL DK + RGE A +CI Sbjct: 676 AQNIAGGLSANASLTVLETPSFIRPLEDKTVTRGETAVLQCI 717
>EXTN_DAUCA (P06599) Extensin precursor| Length = 306 Score = 33.9 bits (76), Expect = 0.27 Identities = 18/66 (27%), Positives = 26/66 (39%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAP 226 +P P H P H E P P+ P + ++ PP +HS P P +P Sbjct: 45 SPPPPEHSPPPPYHYESPPPPKHSPPPPTPVYKYKSPPPPMHSPPPPYHFESPPPPKHSP 104 Query: 225 PLTCPL 208 P P+ Sbjct: 105 PPPTPV 110 Score = 32.3 bits (72), Expect = 0.78 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAP 226 +P P +SP E SP P Y ++ PP +HS P + + +SPP P Sbjct: 225 SPPPPTPVYKSPPPPEHSPPPPTPVYK------YKSPPPPMHSPPPPTPVYKYKSPP--P 276 Query: 225 PLTCP 211 P+ P Sbjct: 277 PMHSP 281 Score = 32.3 bits (72), Expect = 0.78 Identities = 17/60 (28%), Positives = 23/60 (38%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAP 226 +P P H P H E P P+ P + ++ PP HS P + PP P Sbjct: 80 SPPPPMHSPPPPYHFESPPPPKHSPPPPTPVYKYKSPPPPKHSPAPVHHYKYKSPPPPTP 139 Score = 31.6 bits (70), Expect = 1.3 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = -3 Query: 405 TPTPQAH--PLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPF 232 +P P H P +P + SP P P+ P HF PP+ HS P + + +SPP Sbjct: 61 SPPPPKHSPPPPTPVYKYKSPPP-PMHSPPPPYHFESPPPPK-HSPPPPTPVYKYKSPP- 117 Query: 231 APPLTCP 211 PP P Sbjct: 118 -PPKHSP 123
>RCOR2_BRARE (Q6P116) REST corepressor 2| Length = 536 Score = 33.5 bits (75), Expect = 0.35 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Frame = -3 Query: 414 H*CTPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQS-- 241 H +P P + S HS SP P LR +PP L P + R LQ+ Sbjct: 425 HSDSPLPSSEGSASGNHSSAQSSPPLTQPPPLLRPAPPSAPPSLLRQPPPLQTRPLQNRT 484 Query: 240 ----PPFAPPLTCPLLHLSLHR 187 PP PPL P + +LH+ Sbjct: 485 PHNHPP--PPLIRPAIASTLHQ 504
>KIF12_MOUSE (Q9D2Z8) Kinesin-like protein KIF12| Length = 642 Score = 33.1 bits (74), Expect = 0.46 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +3 Query: 318 GSLDRIQVLVRVRPLSDKEIARGEPAEWECINDTTI 425 GS IQV++RVRP+S E+ RGE + C T+ Sbjct: 21 GSETPIQVVLRVRPMSTVELRRGEQSALHCSGTRTL 56
>LRIG2_HUMAN (O94898) Leucine-rich repeats and immunoglobulin-like domains| protein 2 precursor (LIG-2) Length = 1065 Score = 32.7 bits (73), Expect = 0.60 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +3 Query: 285 AEVVNGGGSGAGSLDRIQVLVRVRPLSDKEIARGEPAEWECI 410 A+ GG S SL ++ +RPL DK + RGE A +CI Sbjct: 677 AQNTAGGLSANASLTVLETPSFIRPLEDKTVTRGETAVLQCI 718
>PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A member 1 (T-cell| death-associated gene 51 protein) (Proline- and glutamine-rich protein) (PQR protein) Length = 261 Score = 32.3 bits (72), Expect = 0.78 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = -3 Query: 402 PTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHR--RSPPQLH 280 P P +HP Q P H P P P +P L+H H+ S PQ H Sbjct: 210 PHPYSHPHQHP-HPHPHPHPHPHPHPYQLQHAHQPLHSQPQGH 251 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/41 (36%), Positives = 16/41 (39%) Frame = -3 Query: 402 PTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLH 280 P PQ P HS P P P S+P H H P H Sbjct: 191 PQPQPQPQPQQLHSYPHPHPHPYSHPHQHPHPHPHPHPHPH 231
>DPO3A_SALTY (P14567) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1160 Score = 32.3 bits (72), Expect = 0.78 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +3 Query: 255 ESVQWDKMNGAEVVNGGGSGAGSL 326 E +QW K NG V G GSGAGSL Sbjct: 346 EFIQWSKDNGVPVGPGRGSGAGSL 369
>DPO3A_ECOLI (P10443) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1160 Score = 32.3 bits (72), Expect = 0.78 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = +3 Query: 255 ESVQWDKMNGAEVVNGGGSGAGSL 326 E +QW K NG V G GSGAGSL Sbjct: 346 EFIQWSKDNGVPVGPGRGSGAGSL 369
>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)| Length = 2829 Score = 32.3 bits (72), Expect = 0.78 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSS--------CPTARIRR 250 +P P + PLQSP + +SP +S P R + P S+ T+ R+ Sbjct: 2311 SPQPLSRPLQSPGRNSISPGKNGISPPNKFSQLPRTTSPSTASTKSSGSGRMSYTSPGRQ 2370 Query: 249 LQSPPFAPPLTCPLLHLSLHR 187 L P + P H S+ R Sbjct: 2371 LSQPNLSKQSGLPKTHSSIPR 2391
>KINH_MOUSE (Q61768) Kinesin heavy chain (Ubiquitous kinesin heavy chain)| (UKHC) Length = 963 Score = 32.3 bits (72), Expect = 0.78 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +3 Query: 333 IQVLVRVRPLSDKEIARGEPAEWECINDTTIMFRSTFPERPTAPTAYTFDRVFHSECS 506 I+V+ R RPL++ E+ RG+ + + T++ A Y FDRVF S S Sbjct: 9 IKVMCRFRPLNESEVNRGDKYVAKFQGEDTVVI---------ASKPYAFDRVFQSSTS 57
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 32.3 bits (72), Expect = 0.78 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = -3 Query: 402 PTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAP- 226 P PQ P+ P PSP+PV+ PG + P S CP+ + PP AP Sbjct: 51 PYPQPWPMNPPTPD---PSPKPVAPPG---PSSKPVAPPGPSPCPSPPPKPQPKPPPAPS 104 Query: 225 PLTCP 211 P CP Sbjct: 105 PSPCP 109
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -3 Query: 405 TPTPQAHPLQSPCH-SEVSPSPR--PVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPP 235 +P P+ PL P S +SP P P+S P PP++ P + RL PP Sbjct: 609 SPPPEESPLSPPPEASRLSPPPEDSPMSPPP--EESPMSPPPEVSRLSPLPVVSRLSPPP 666 Query: 234 FAPPLTCPLL 205 PL+ P L Sbjct: 667 EESPLSPPAL 676
>KINH_HUMAN (P33176) Kinesin heavy chain (Ubiquitous kinesin heavy chain)| (UKHC) Length = 963 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +3 Query: 333 IQVLVRVRPLSDKEIARGEPAEWECINDTTIMFRSTFPERPTAPTAYTFDRVFHSECS 506 I+V+ R RPL++ E+ RG+ + + T++ A Y FDRVF S S Sbjct: 9 IKVMCRFRPLNESEVNRGDKYIAKFQGEDTVVI---------ASKPYAFDRVFQSSTS 57
>HCN1_HUMAN (O60741) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) Length = 890 Score = 32.0 bits (71), Expect = 1.0 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPP----QLHSSCPTARIRRLQSP 238 T TPQ + SPC + PV P R FH SP L P ++++ Q P Sbjct: 685 TQTPQPSAILSPCSYTTAVCSPPVQSPLAARTFHYASPTASQLSLMQQQPQQQVQQSQPP 744 Query: 237 PFAPPLTCP 211 P P Sbjct: 745 QTQPQQPSP 753
>MSPD3_MOUSE (Q8BGG6) Motile sperm domain-containing protein 3| Length = 235 Score = 31.6 bits (70), Expect = 1.3 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Frame = -3 Query: 390 AHPLQSPCHSEVSPSPRPVSYPGF--LRHFHRRSPPQLHSS 274 A+PL+ HSE +P+P P + G RH +P QL +S Sbjct: 139 AYPLELQGHSEPTPNPGPPVWTGLTPARHLQENAPQQLATS 179
>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3| Length = 299 Score = 31.2 bits (69), Expect = 1.7 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -2 Query: 352 TLTKTCILSRLPAPLPPPFTTSAPFILSHCTDSSPP 245 T T+T ++ P P PPP TT+AP + T ++PP Sbjct: 167 TATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPP 202
>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3| Length = 299 Score = 31.2 bits (69), Expect = 1.7 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = -2 Query: 352 TLTKTCILSRLPAPLPPPFTTSAPFILSHCTDSSPP 245 T T+T ++ P P PPP TT+AP + T ++PP Sbjct: 167 TATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPP 202
>HCN1_RABIT (Q9MZS1) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (rbHCN1) Length = 822 Score = 31.2 bits (69), Expect = 1.7 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAP 226 T TPQ + SPC + PV P R FH SP S + ++ Q+P P Sbjct: 621 TQTPQPSAILSPCSYTTAVCSPPVQSPLATRTFHYASPTASQLSLMPQQQQQPQAPQTQP 680
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/59 (33%), Positives = 22/59 (37%) Frame = -3 Query: 402 PTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAP 226 P PQ P P + P PRPV P H + PP PT Q PP P Sbjct: 981 PPPQPQP---PPQQQHQPPPRPVHLPSMPFSAHIQQPPPPPGQQPTHPPPGQQPPPPQP 1036
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/72 (27%), Positives = 24/72 (33%), Gaps = 13/72 (18%) Frame = -3 Query: 387 HPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSP-------------PQLHSSCPTARIRRL 247 HP H P P P +P FH R+P P + P + Sbjct: 212 HPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAMHSDQQ 271 Query: 246 QSPPFAPPLTCP 211 SPP APP P Sbjct: 272 MSPPIAPPQNPP 283
>DPO3A_PSEFL (Q9XDH6) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1173 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 261 VQWDKMNGAEVVNGGGSGAGSL 326 +QW K NG V G GSGAGSL Sbjct: 350 IQWAKNNGVPVGPGRGSGAGSL 371
>KRP95_STRPU (P46871) Kinesin-II 95 kDa subunit (KRP-85/95 95 kDa subunit)| Length = 742 Score = 30.8 bits (68), Expect = 2.3 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +3 Query: 321 SLDRIQVLVRVRPLSDKEIARGEPAEWECINDTTIMFRSTFPERPTAP--TAYTFDRVF 491 S + ++V+VR RP++ KEI++G E N ++ T P+ P ++TFD V+ Sbjct: 5 SAETVKVVVRCRPMNSKEISQGHKRIVEMDNKRGLV-EVTNPKGPPGEPNKSFTFDTVY 62
>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)| Length = 2842 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSS 274 T P + P+QSP + +SP +S P L R S P S+ Sbjct: 2313 TQQPLSRPMQSPGRNSISPGRNGISTPNKLSQLPRTSSPSTAST 2356
>APC_MOUSE (Q61315) Adenomatous polyposis coli protein (Protein APC) (mAPC)| Length = 2845 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSS 274 T P + P+QSP + +SP +S P L R S P S+ Sbjct: 2313 TQQPLSRPMQSPGRNSISPGRNGISPPNKLSQLPRTSSPSTAST 2356
>KIF12_HUMAN (Q96FN5) Kinesin-like protein KIF12| Length = 646 Score = 30.0 bits (66), Expect = 3.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 333 IQVLVRVRPLSDKEIARGEPAEWECINDTTI 425 IQV++RVRP+S E+ RG+ + C T+ Sbjct: 26 IQVVLRVRPMSAAELRRGQQSVLHCSGTRTL 56
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 30.0 bits (66), Expect = 3.9 Identities = 20/46 (43%), Positives = 21/46 (45%) Frame = -3 Query: 372 PCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPP 235 P S V SPRP S P L+H R L S P RRL PP Sbjct: 826 PPRSPVLGSPRPPSPPPLLKHGPRHRSLNLPSRLPRT-WRRLSEPP 870
>KL61_DROME (P46863) Bipolar kinesin KRP-130 (Kinesin-like protein Klp61F)| Length = 1066 Score = 30.0 bits (66), Expect = 3.9 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = +3 Query: 321 SLDRIQVLVRVRPLSDKEIARGEPAEWECINDTTIMFRSTFPERPTAPTAYTFDRVFHSE 500 S IQV VRVRPL+ +E + + ++ R T + T +TFDR F E Sbjct: 16 SNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLT--KKFTFDRSFGPE 73
>EME1_KLULA (Q6CNM6) Crossover junction endonuclease EME1 (EC 3.1.22.-)| Length = 690 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Frame = -3 Query: 402 PTPQAHPLQSPC---HSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTAR-IRRLQSPP 235 P PQ+ PL+ + +++ SP P P +SP QL ++ R R +Q P Sbjct: 162 PLPQSSPLEKMSQVFNYQLASSPTPNKSPSSRSTLPVKSPLQLSTTVANKRSYREVQPPK 221 Query: 234 FAPPLT 217 F P LT Sbjct: 222 FDPYLT 227
>SOX7_MOUSE (P40646) Transcription factor SOX-7 (mSOX7)| Length = 380 Score = 29.6 bits (65), Expect = 5.0 Identities = 24/87 (27%), Positives = 31/87 (35%) Frame = -1 Query: 449 FREGTPKHDGGVIDALPLRRLTPCNLLVTQRSHPHQDLYPIQASCATSTAVHHLSSIHLV 270 +REG G V D P TP + P Q + +SC Sbjct: 175 YREGAAAAPGSV-DTYPYGLPTPPEMSPLDALEPEQTFF--SSSCQEE------------ 219 Query: 269 PLHGFVASNRPHSLPHLPAPSFTSPYT 189 HG PH LPHLP P ++ +T Sbjct: 220 --HG-----HPHHLPHLPGPPYSPEFT 239
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 29.6 bits (65), Expect = 5.0 Identities = 25/77 (32%), Positives = 33/77 (42%) Frame = -3 Query: 450 VPGRYSET*WWCH*CTPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSC 271 +P SE H TP AH Q+ H+ P P P S+P + H P + S Sbjct: 84 LPSARSEQGLPAHNTYSTPHAHT-QAHTHAHSHPQPHPQSHPQSNQPPHALPTP--NGSS 140 Query: 270 PTARIRRLQSPPFAPPL 220 + I QSPP PP+ Sbjct: 141 SVSAIFSHQSPP--PPV 155
>DPO3A_BUCAI (P57332) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1161 Score = 29.6 bits (65), Expect = 5.0 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +3 Query: 255 ESVQWDKMNGAEVVNGGGSGAGSLDRIQV-LVRVRPLS 365 E +QW K N V G GSGAGSL + + V PLS Sbjct: 347 EFIQWAKDNNIPVGPGRGSGAGSLVAYALNITEVDPLS 384
>YRR2_CAEEL (Q09345) Hypothetical protein R144.2| Length = 823 Score = 29.6 bits (65), Expect = 5.0 Identities = 22/64 (34%), Positives = 26/64 (40%) Frame = -3 Query: 402 PTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAPP 223 P A P Q P P PV + G R +H SPPQ A I +Q+PP Sbjct: 338 PLSSAPPFQHPQQHHPQLPPPPV-HQGMGRGYHHNSPPQ-----DPAPIVPVQAPPPQQH 391 Query: 222 LTCP 211 L P Sbjct: 392 LPAP 395
>DPO3A_PSEAE (Q9HXZ1) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1173 Score = 29.3 bits (64), Expect = 6.6 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 261 VQWDKMNGAEVVNGGGSGAGSL 326 ++W K NG V G GSGAGSL Sbjct: 349 IKWAKNNGVPVGPGRGSGAGSL 370
>APC_HUMAN (P25054) Adenomatous polyposis coli protein (Protein APC)| Length = 2843 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 396 PQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSS 274 P + P+QSP + +SP +S P L R S P S+ Sbjct: 2316 PLSRPIQSPGRNSISPGRNGISPPNKLSQLPRTSSPSTAST 2356
>DPO3A_VIBCH (P52022) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1159 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +3 Query: 255 ESVQWDKMNGAEVVNGGGSGAGSL 326 E +QW K N V G GSGAGSL Sbjct: 346 EFIQWSKDNDIPVGPGRGSGAGSL 369
>DPO3A_PASMU (Q9CPK3) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1159 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +3 Query: 255 ESVQWDKMNGAEVVNGGGSGAGSL 326 E +QW K N V G GSGAGSL Sbjct: 345 EFIQWSKDNDIPVGPGRGSGAGSL 368
>DPO3A_HAEIN (P43743) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1159 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +3 Query: 255 ESVQWDKMNGAEVVNGGGSGAGSL 326 E +QW K N V G GSGAGSL Sbjct: 346 EFIQWSKDNDIPVGPGRGSGAGSL 369
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 29.3 bits (64), Expect = 6.6 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 3/69 (4%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSS---CPTARIRRLQSPP 235 TP HP Q PC P+ P ++ H PP +H P + + ++PP Sbjct: 80 TPKHPKHPPQKPCPPPSHHGPK----PPIVKPPHVPRPPIVHPPPIVSPPSTPKPPKTPP 135 Query: 234 FAPPLTCPL 208 F P P+ Sbjct: 136 FTPKPPSPI 144
>KIF1A_HUMAN (Q12756) Kinesin-like protein KIF1A (Axonal transporter of synaptic| vesicles) Length = 1690 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +3 Query: 333 IQVLVRVRPLSDKEIARGEPAEWECINDTTIMFRSTFPERPTAPTAYTFDRVFHSECS 506 ++V VRVRP + +E++R + TT + P+ P +++FD + S S Sbjct: 6 VKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKE--TPKSFSFDYSYWSHTS 61
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 29.3 bits (64), Expect = 6.6 Identities = 25/62 (40%), Positives = 27/62 (43%) Frame = -3 Query: 372 PCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAPPLTCPLLHLSL 193 P S + SPRP S P L H RRS L S P RRL PP P + L Sbjct: 835 PPGSPLPGSPRPPSPPLGLCHSPRRSSLNLPSRLPHT-WRRLSEPP--TRAVKPQVRLPF 891 Query: 192 HR 187 HR Sbjct: 892 HR 893
>KIF1A_MOUSE (P33173) Kinesin-like protein KIF1A (Axonal transporter of synaptic| vesicles) Length = 1695 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +3 Query: 333 IQVLVRVRPLSDKEIARGEPAEWECINDTTIMFRSTFPERPTAPTAYTFDRVFHSECS 506 ++V VRVRP + +E++R + TT + P+ P +++FD + S S Sbjct: 6 VKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKE--TPKSFSFDYSYWSHTS 61
>PP2A4_ORYSA (Q9SBW3) Serine/threonine-protein phosphatase PP2A-4 catalytic| subunit (EC 3.1.3.16) Length = 315 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%) Frame = +3 Query: 303 GGSGAGSLD-RIQVLVRVRPLSDKEI 377 GGSG G LD +I+ L+ RPLS+ E+ Sbjct: 9 GGSGGGGLDAQIEQLMECRPLSETEV 34
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTARIRRLQSPPFAP 226 TP+P +P + +SP P ++ PPQ + P+ + + Q P A Sbjct: 520 TPSPSPTAAAAPTTTTLSPPPT------------QQQPPQSAAPAPSPLLPQQQPTPSAA 567 Query: 225 PLTCPLL 205 P PLL Sbjct: 568 PAPSPLL 574
>SP7_MOUSE (Q8VI67) Transcription factor Sp7 (Zinc finger protein osterix)| (C22) Length = 428 Score = 28.9 bits (63), Expect = 8.6 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -2 Query: 82 GSGGFWSRGAGSGAGLTACDC 20 GSGG+ AGSGAG + CDC Sbjct: 253 GSGGY----AGSGAGRSTCDC 269
>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)| Length = 1201 Score = 28.9 bits (63), Expect = 8.6 Identities = 25/69 (36%), Positives = 30/69 (43%) Frame = -1 Query: 359 RSHPHQDLYPIQASCATSTAVHHLSSIHLVPLHGFVASNRPHSLPHLPAPSFTSPYTVKA 180 R HQ+ P S A+S H SS P V S P+ +P P P+ TSP A Sbjct: 760 RRGAHQNAQPCCPSAASSP---HTSSPTFPPA-AMVPSQAPYLVPAFPLPAATSPGREYA 815 Query: 179 WRRRAAPEG 153 APEG Sbjct: 816 -APGTAPEG 823
>GGTL4_HUMAN (Q14390) Gamma-glutamyltransferase-like protein 4| Length = 252 Score = 28.9 bits (63), Expect = 8.6 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = -3 Query: 393 QAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRS--PPQLHS 277 +AHP Q P H++ +P P+ + Y + + +R+ P+LH+ Sbjct: 149 RAHPAQPPSHADHTPMPQAIIYNLWFGYDVKRAVEEPRLHN 189
>CD68_HUMAN (P34810) Macrosialin precursor (GP110) (CD68 antigen)| Length = 354 Score = 28.9 bits (63), Expect = 8.6 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 16/76 (21%) Frame = -1 Query: 365 TQRSHPHQDLYPIQASCATS----TAVH------------HLSSIHLVPLHGFVASNRPH 234 T SH + ++P S ATS TA H H +S GF +S P Sbjct: 82 TTTSHGNVTVHPTSNSTATSQGPSTATHSPATTSHGNATVHPTSNSTATSPGFTSSAHPE 141 Query: 233 SLPHLPAPSFTSPYTV 186 P P+PS TS T+ Sbjct: 142 PPPPSPSPSPTSKETI 157
>DTNA_HUMAN (Q9Y4J8) Dystrobrevin alpha (Dystrobrevin-alpha)| Length = 743 Score = 28.9 bits (63), Expect = 8.6 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -3 Query: 345 PRPVSYPGFLRHFHRRSPPQLHSSCPTARIR 253 P P S FL H R P +HS T+ +R Sbjct: 661 PSPTSEKAFLAQIHARKPGYIHSGATTSTMR 691
>PDGFB_RAT (Q05028) Platelet-derived growth factor B chain precursor (PDGF| B-chain) (Platelet-derived growth factor beta polypeptide) (PDGF-2) (Fragment) Length = 225 Score = 28.9 bits (63), Expect = 8.6 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -3 Query: 369 CHSEVSPSPRPVS-YPGFLRHFHRRSPPQLHSSCPTARIRR 250 C E +PRPV+ PG R HR PQ + T RIRR Sbjct: 170 CKCETVVTPRPVTRSPGTSRE-HRAKTPQTRVTVRTVRIRR 209
>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)| Length = 926 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSS 274 TPTP + P + S PR +S P + + + P HSS Sbjct: 859 TPTPALVQTEGPANPGASSGPRRLSTPNLMCNPDKPDAPAFHSS 902
>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein| Length = 1259 Score = 28.9 bits (63), Expect = 8.6 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = -3 Query: 408 CTPTPQAHP--LQSPCHSEVSPSPRPVSYPGFLRHFHRRSPPQLHSSCPTA-RIRRLQSP 238 C P P L+ PC P P+P ++ PQL + P ++R ++P Sbjct: 284 CCKEPIFEPVVLKDPCPQVAQPIPQP------------QTEPQLRAPSPDPDLVQRTEAP 331 Query: 237 PFAPPLT 217 P PPL+ Sbjct: 332 PQPPPLS 338
>DPO3A_XYLFT (Q87EY0) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1193 Score = 28.9 bits (63), Expect = 8.6 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 261 VQWDKMNGAEVVNGGGSGAGSL 326 +QW K G + G GSGAGSL Sbjct: 358 IQWGKQQGIPIGPGRGSGAGSL 379
>DPO3A_XYLFA (Q9PGU4) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1193 Score = 28.9 bits (63), Expect = 8.6 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +3 Query: 261 VQWDKMNGAEVVNGGGSGAGSL 326 +QW K G + G GSGAGSL Sbjct: 358 IQWGKQQGIPIGPGRGSGAGSL 379
>CRE1_NEUCR (O59958) DNA-binding protein cre-1 (Carbon catabolite repressor)| Length = 430 Score = 28.9 bits (63), Expect = 8.6 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -3 Query: 405 TPTPQAHPLQSPCHSEVSPSPRPVSYPGF-LRHFHRRSPPQLHSSCPTARIRRLQSPPFA 229 +PTP PL +P H SPR +PG L F S Q H++ A + F+ Sbjct: 308 SPTPDHTPLATPAH-----SPRLRPHPGLELPPFRNLSLGQQHTTPALAPLEPALDGQFS 362 Query: 228 PPLTCP 211 P T P Sbjct: 363 LPQTPP 368
>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent| helicase brm) (Protein brahma) Length = 1638 Score = 28.9 bits (63), Expect = 8.6 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 10/48 (20%) Frame = -3 Query: 402 PTPQAHPLQSPCHSEVSP----------SPRPVSYPGFLRHFHRRSPP 289 P+P A P QSP S SP P P +PG H + PP Sbjct: 17 PSPMAPPSQSPAPSPHSPYPHQQPGPLQGPPPPGHPGAYGHPMQHGPP 64
>DPO3A_BUCAP (Q8K9S3) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1161 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +3 Query: 255 ESVQWDKMNGAEVVNGGGSGAGSL 326 E +QW K N V G GSGAGSL Sbjct: 345 EFIQWAKDNNIPVGPGRGSGAGSL 368 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,944,541 Number of Sequences: 219361 Number of extensions: 1548925 Number of successful extensions: 8648 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 6076 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8517 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
