>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +1

Query: 328 NYPP----SWNSGDPCGAPWDGIMCTNGRVTSLRLSSVNMQGTLSDSVGQLSEL 477
           +YPP    SW   DPC   W GI C+NG +T + L  + + GT+S   G +  L
Sbjct: 336 DYPPRLAESWKGNDPC-TNWIGIACSNGNITVISLEKMELTGTISPEFGAIKSL 388



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = +1

Query: 289 DAAALRSLMGKWTNYPPS---WNSGDPCGAPWDGIMCTNG-RVTSLRLSSVNMQGTLSDS 456
           D +A+ SL  K +  PPS   W+  DPC   W  I+CT   RVT +++    +QGTLS  
Sbjct: 28  DLSAMLSL--KKSLNPPSSFGWSDPDPC--KWTHIVCTGTKRVTRIQIGHSGLQGTLSPD 83

Query: 457 VGQLSEL 477
           +  LSEL
Sbjct: 84  LRNLSEL 90

>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)|
          Length = 924

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
 Frame = +1

Query: 340 SWNSGDPCGA-PWDGIMC--TNGR--VTSLRLSSVNMQGTLSDSVGQLSEL 477
           SW SGDPC   PW G+ C  +NG   +T L LSS N++GT+  SV ++++L
Sbjct: 382 SW-SGDPCMLFPWKGVACDGSNGSSVITKLDLSSSNLKGTIPSSVTEMTKL 431

>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
 Frame = +1

Query: 289 DAAALRSLMGKWTNYPP----SWNSGDPCGAPWDGIMCTNGR-VTSLRLSSVNMQGTLSD 453
           D AAL SL   WT+ P     SWN+ D     W G+ C   + V +L LSS  + G    
Sbjct: 27  DGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECDRRQFVDTLNLSSYGISGEFGP 86

Query: 454 SVGQLSEL 477
            +  L  L
Sbjct: 87  EISHLKHL 94

>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does|
           not make infections protein 2) (Symbiosis receptor-like
           kinase) (MtSYMRK)
          Length = 925

 Score = 35.8 bits (81), Expect = 0.059
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +1

Query: 340 SWNSGDPCGA-PWDGIMCTNGR----VTSLRLSSVNMQGTLSDSVGQLSEL 477
           SW SGDPC   PW GI C +      +T L LSS N++G +   V +++ L
Sbjct: 384 SW-SGDPCMIFPWKGITCDDSTGSSIITKLDLSSNNLKGAIPSIVTKMTNL 433

>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 340 SWN-SGDPCGAPWDGIMCTNGRVTSLRLSSVNMQGTLSDSVGQLSEL 477
           SWN S       W G+ C  GRV SL L S++++G +   +  L  L
Sbjct: 45  SWNVSSSASHCDWVGVTCLLGRVNSLSLPSLSLRGQIPKEISSLKNL 91

>MURD_STRAW (Q82AD8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 467

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 292 AAALRSLMGKWTNYPPSWNSGDPCGAPWDGIMCTNGRVTSLRL--SSVNMQGTLSDSVGQ 465
           AAA  + +  W +   +W    P  APW  +  TNG+ T++++  S +   G  + +VG 
Sbjct: 86  AAAAEAGVPVWGDVELAWRLRGPGSAPWLAVTGTNGKTTTVQMLASILTAAGLRTAAVGN 145

Query: 466 L 468
           +
Sbjct: 146 I 146

>ZAN_RABIT (P57999) Zonadhesin (Fragment)|
          Length = 2282

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -2

Query: 149  EGEHRRASCALCVVCRPGWLLWSSAGSSRRLCVC----GAKVEDGKQAGTAGC 3
            EG    +SCA    C+PG++L  +   ++  C C    G  +  GK   ++GC
Sbjct: 1695 EGARAPSSCAEGCTCQPGYVLSKNKCVAKDQCSCRDAQGGSIPSGKSWVSSGC 1747

>CORA_WHV2 (P06433) Core antigen|
          Length = 187

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 6   PSRARLLPVLDFCPTHTQTTRASGRRPEEPARSTDNTQGARSAAVLSFRGKAPTSD 173
           P R    P+L   P HT   R   R    P R T + +  RS +    R ++P+++
Sbjct: 131 PYRPPNAPILSTLPEHTVIRRGGARASRSPRRRTPSPRRRRSQSPRRRRSQSPSAN 186

>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)|
           (AtBRI1) (Brassinosteroid LRR receptor kinase)
          Length = 1196

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +1

Query: 328 NYPPSWNSG-DPCGAPWDGIMCTNGRVTSLRLSS 426
           N  P W+S  +PC   +DG+ C + +VTS+ LSS
Sbjct: 50  NLLPDWSSNKNPC--TFDGVTCRDDKVTSIDLSS 81

>CND2_XENLA (O13067) Condensin complex subunit 2 (Chromosome-associated protein|
           H) (Chromosome assembly protein xCAP-H) (Barren homolog)
          Length = 699

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +2

Query: 8   QPCPPASRPRLLPHTHTDDESFRPTTRGASQVDRQHTRRKKRGGALLPGQ 157
           QP   A+ P LL  T  DDE  R   R +  +D Q +       A+ P Q
Sbjct: 29  QPISAAATPTLLNFTSNDDERERKLRRMSRVIDLQLSNANSPATAISPAQ 78

>Y920_TREPA (O83890) Hypothetical protein TP0920|
          Length = 809

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +1

Query: 1   IHPAVPACFPSSTFAPHTHRRRELPADDQRSQPGRQTTH--KAQEARRCSPSGARLRPA 171
           I  A   CF +  +  H HR  EL A    SQP    T   +A E  R  P+ A LR A
Sbjct: 231 IQAAGKVCFAAQNWGVHAHRSFELSAFSLESQPFMVETACLRANEPARI-PASAHLRLA 288

>RUMB_HAEIN (P44083) 23S rRNA (uracil-5-)-methyltransferase rumB (EC 2.1.1.-)|
           (23S rRNA(M-5-U747)-methyltransferase)
          Length = 392

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +1

Query: 259 PAGLCQTNPDDAAALRSLMGKWTNYPPSWNSGDP-CGAPWDGIMC 390
           P G  QTNP  AA L +   +W    P +N  D  CG    G+ C
Sbjct: 213 PRGFFQTNPKVAAGLYATAQQWVAEFPIYNLWDLFCGVGGFGLHC 257

>ZAN_HUMAN (Q9Y493) Zonadhesin precursor|
          Length = 2812

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -2

Query: 149  EGEHRRASCALCVVCRPGWLLWSSAGSSRRLCVC----GAKVEDGKQAGTAGC 3
            EG    ++CA   +C+PG++L       R  C C    G  +  GK   ++GC
Sbjct: 2236 EGAKVPSACAEGCICQPGYVLSEDKCVPRSQCGCKDAHGGSIPLGKSWVSSGC 2288

>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 46  PHTHRRRELPADDQRSQPGRQTTHKAQEARRCSPSGA 156
           PHT + RE P D++  + G       Q  R C  S A
Sbjct: 649 PHTPQTREEPTDEEECEDGDYYDRSKQRCRHCHDSCA 685

>PME17_BOVIN (Q06154) Melanocyte protein Pmel 17 (Retinal pigment|
           epithelial-specific protein) (Fragment)
          Length = 491

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +3

Query: 3   TPSRARLLPVLDFCPTHTQTTRASGRRPE----EPARSTDNTQGARSAAVLSFRGKAPTS 170
           TP +     VL   P    T +A+GR PE    EP+  T  TQG     V +  G+  T 
Sbjct: 205 TPEQVATSKVLSTTPVEMPTAKATGRTPEVSTTEPS-GTTVTQGTTPELVETTAGEVSTP 263

Query: 171 D 173
           +
Sbjct: 264 E 264

>TGT_GLOVI (Q7NMG4) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 378

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +2

Query: 5   TQPCPPASRPRLLPHTHTDDESFRPTTRGASQVDR-QHTRRKKRGGALLPGQGSDQRL 175
           T P  P  +PR L    T  E  +    G    D    TR  + G ALL G G D+R+
Sbjct: 233 TAPLLPEHKPRYLMGVGTFREMAQAVAVGVDLFDCVMPTRVARHGSALLLGTGGDRRI 290

>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +1

Query: 28   PSSTFAPHTHRRRELPADDQRSQPGRQTTHKAQEARRCSPSGARLRPATQ 177
            PSS   P     R+ P   Q+ Q  +Q     Q+A + +PS ARL+P +Q
Sbjct: 3770 PSSRQTPSGTASRQ-PQTQQQQQQQQQQQGLGQQAPQQAPSQARLQPQSQ 3818

>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -2

Query: 131  ASCALCVVCRPGWLLWSSAGSSRRLCVC----GAKVEDGKQAGTAGC 3
            +SC    VC+ G++L +     R  C C    GA + +GK   T+GC
Sbjct: 3093 SSCREGCVCQSGYVLHNDKCILRNQCGCKDAQGALIPEGKTWITSGC 3139

>CORA_HPBGS (P03153) Core antigen|
          Length = 217

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +3

Query: 6   PSRARLLPVLDFCPTHTQTTRASG-RRPEEPARSTDNTQGARSAAVLSFRGKAPTSD 173
           P R    P+L   P HT   R  G R    P R T + +  RS +    R ++P S+
Sbjct: 160 PYRPPNAPILSTLPEHTVIRRRGGSRAARSPRRRTPSPRRRRSQSPRRRRSQSPASN 216


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.129    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,403,444
Number of Sequences: 219361
Number of extensions: 1049246
Number of successful extensions: 4358
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4356
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)