>RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B (mHR23B) (XP-C|
           repair-complementing complex 58 kDa protein) (p58)
          Length = 416

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 24/75 (32%), Positives = 33/75 (44%)
 Frame = +1

Query: 19  PQPKAAGEPDTSTAADGNTSSTM*QQAPVRISAANPTVTAPRPAGRTVVVVNFLPASTTR 198
           P P  A  P TST A    +ST     P    A  P   A +PA +T V+ +  PA +T 
Sbjct: 111 PAPTPALAP-TSTPASTTPASTTASSEPAPAGATQPEKPAEKPA-QTPVLTSPAPADSTP 168

Query: 199 RRSCKFNVSDHGDRA 243
             S + N+ +    A
Sbjct: 169 GDSSRSNLFEDATSA 183

>RR15_AMBTC (Q70XV7) Chloroplast 30S ribosomal protein S15|
          Length = 87

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -3

Query: 309 SKPGQTKILGRRKRM---MGDKNQVSTVTMIGDIEFARPSS 196
           S+ G  KILG+R+RM   + +KN+V    +IG +    P +
Sbjct: 46  SQRGMRKILGKRQRMLAYLSNKNKVRYKKLIGQLNIREPKT 86

>CADH4_HUMAN (P55283) Cadherin-4 precursor (Retinal-cadherin) (R-cadherin)|
           (R-CAD)
          Length = 916

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 25/85 (29%), Positives = 32/85 (37%)
 Frame = +1

Query: 46  DTSTAADGNTSSTM*QQAPVRISAANPTVTAPRPAGRTVVVVNFLPASTTRRRSCKFNVS 225
           D    ADG   +T   Q P    A   T    + A +   VV  L A T+         S
Sbjct: 76  DFKVGADGTVFATRELQVPSEQVAFTVTAWDSQTAEKWDAVVRLLVAQTSSPH------S 129

Query: 226 DHGDRADLVLVAHHPLPPAQDLCLP 300
            H  +    +VA  P PP +D  LP
Sbjct: 130 GHKPQKGKKVVALDPSPPPKDTLLP 154

>HA22J_ARATH (Q8GXE9) HVA22-like protein j (AtHVA22j)|
          Length = 258

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = +1

Query: 1   LALIINPQPKAAGEPDTSTAADGNTSSTM*QQAPVRISAANPTVTAPRPAGRTVVVVNFL 180
           LA  +     AA +P T    + N       Q+PV +    P+  APRP  +++  +  L
Sbjct: 143 LAQSVRFSAAAANQPPTERNVNMNA------QSPVEMDNDPPSPRAPRPLNKSLSALRSL 196

Query: 181 PASTTRRR 204
              T+R R
Sbjct: 197 EKQTSRGR 204

>YHGF_NEIMB (Q51152) Hypothetical protein NMB0075|
          Length = 757

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -1

Query: 215 NLQDLLLVVDAGRKLTTTTVRPAGRGAVTVGLAAEIRTGACCYIVDE 75
           NL+DLLLV  AGR               T+GL    R G  C +VD+
Sbjct: 305 NLKDLLLVAPAGR-------------LTTLGLDPGYRNGVKCAVVDD 338

>IPYR_RICPR (Q9ZCW5) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate|
           phospho-hydrolase) (PPase)
          Length = 172

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +1

Query: 190 TTRRRSCKFN-----VSDHGDRADLVLVAHHPLPP 279
           TT    C +      +S+ GD  D+++VAHHP+ P
Sbjct: 47  TTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVP 81

>IPYR_RICCN (Q92H74) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate|
           phospho-hydrolase) (PPase)
          Length = 173

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +1

Query: 190 TTRRRSCKFN-----VSDHGDRADLVLVAHHPLPP 279
           TT    C +      +S+ GD  D+++VAHHP+ P
Sbjct: 47  TTMSYPCNYGFIPHTLSNDGDPVDVLVVAHHPVVP 81

>DOF51_ARATH (Q9LZ56) Dof zinc finger protein DOF5.1 (AtDOF5.1)|
          Length = 399

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 232 GDRADLVLVAHHPLPPAQDLCLPRLRPIRQAPGAGDPHHPG 354
           G+  +   + HHPLPP Q    P+L       G   P  PG
Sbjct: 31  GNNINQQFLPHHPLPPQQQQTPPQLHHNNGNGGVAVPGGPG 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,640,235
Number of Sequences: 219361
Number of extensions: 1194525
Number of successful extensions: 3827
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3823
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)