Clone Information

BLAST Search Result

Clone Name	bastl28h03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in...	35	0.043
2	NRX2B_HUMAN (P58401) Neurexin-2-beta precursor (Neurexin II-beta)	34	0.096
3	NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha)	34	0.096
4	SOX14_DROME (P40656) Putative transcription factor SOX-14	34	0.096
5	PAF49_HUMAN (O15446) RNA polymerase I-associated factor PAF49 (A...	33	0.13
6	NRX2B_RAT (Q63376) Neurexin-2-beta precursor (Neurexin II-beta)	33	0.16
7	NRX2A_RAT (Q63374) Neurexin-2-alpha precursor (Neurexin II-alpha)	33	0.16
8	RPOB_PSEAE (Q51561) DNA-directed RNA polymerase beta chain (EC 2...	33	0.16
9	NEU2_MOUSE (P35455) Vasopressin-neurophysin 2-copeptin precursor...	32	0.37
10	AMPH_MOUSE (Q7TQF7) Amphiphysin	31	0.63
11	GALP_ECOLI (P0AEP1) Galactose-proton symporter (Galactose transp...	31	0.82
12	GALP_ECOL6 (P0AEP2) Galactose-proton symporter (Galactose transp...	31	0.82
13	NEU2_RAT (P01186) Vasopressin-neurophysin 2-copeptin precursor (...	31	0.82
14	NEU1_PIG (P01177) Oxytocin-neurophysin 1 precursor (OT-NPI) [Con...	31	0.82
15	NEU2_BALPH (P01184) Vasopressin-neurophysin 2 precursor [Contain...	30	1.1
16	CIC_MOUSE (Q924A2) Protein capicua homolog	30	1.1
17	AMPH_RAT (O08838) Amphiphysin	30	1.1
18	NEU1_MOUSE (P35454) Oxytocin-neurophysin 1 precursor (OT-NPI) [C...	30	1.1
19	NEU2_HORSE (P01182) Neurophysin 2 (Fragment)	30	1.4
20	NEU1_HORSE (P01176) Oxytocin-neurophysin 1 precursor (OT-NPI) [C...	30	1.4
21	NEU2_PIG (P01183) Vasopressin-neurophysin 2-copeptin precursor (...	30	1.4
22	NEU2_BOVIN (P01180) Vasopressin-neurophysin 2-copeptin precursor...	30	1.4
23	NEU1_SHEEP (P13389) Oxytocin-neurophysin 1 precursor (OT-NPI) [C...	30	1.4
24	NEU1_BOVIN (P01175) Oxytocin-neurophysin 1 precursor (OT-NPI) [C...	30	1.4
25	PAF49_MOUSE (Q76KJ5) RNA polymerase I-associated factor PAF49 (A...	30	1.8
26	RL2_THEMA (P38510) 50S ribosomal protein L2	30	1.8
27	VE4_HPV57 (P22157) Probable protein E4	30	1.8
28	IP3KC_RAT (Q80ZG2) Inositol-trisphosphate 3-kinase C (EC 2.7.1.1...	29	2.4
29	NEU2_CAVPO (P10769) Vasopressin-neurophysin 2-copeptin precursor...	29	2.4
30	ARAF_HUMAN (P10398) A-Raf proto-oncogene serine/threonine-protei...	29	3.1
31	BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing prote...	29	3.1
32	ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in...	29	3.1
33	NEU2_SHEEP (P01181) Vasopressin-neurophysin 2-copeptin precursor...	29	3.1
34	ZCHC8_MOUSE (Q9CYA6) Zinc finger CCHC domain-containing protein 8	29	3.1
35	NEU1_RAT (P01179) Oxytocin-neurophysin 1 precursor (OT-NPI) [Con...	29	3.1
36	PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)	28	4.1
37	SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4	28	4.1
38	ARHG1_MOUSE (Q61210) Rho guanine nucleotide exchange factor 1 (L...	28	4.1
39	NEU2_LOXAF (P81768) Neurophysin 2 (Neurophysin-II) (E-NP)	28	4.1
40	POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocaps...	28	4.1
41	SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-a...	28	4.1
42	PCD16_HUMAN (Q96JQ0) Protocadherin-16 precursor (Dachsous 1) (Ca...	28	5.3
43	LPRE_MYCLE (Q9CC94) Putative lipoprotein lprE precursor	28	5.3
44	CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)	28	5.3
45	PEX12_PICPA (Q01961) Peroxisome assembly protein 12 (Peroxin-12)...	28	5.3
46	HSN2_RAT (Q6IFS7) Protein HSN2 precursor	28	6.9
47	PRGR_RABIT (P06186) Progesterone receptor (PR)	28	6.9
48	LEXA_CAUCR (Q9A724) LexA repressor (EC 3.4.21.88)	28	6.9
49	ARAF_PIG (O19004) A-Raf proto-oncogene serine/threonine-protein ...	27	9.0
50	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	27	9.0
51	TMM24_MOUSE (Q80X80) Transmembrane protein 24	27	9.0
52	VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane an...	27	9.0
53	UNC52_CAEEL (Q06561) Basement membrane proteoglycan precursor (P...	27	9.0
54	PIVA2_ADE07 (P03273) Maturation protein (Protein IVA2)	27	9.0
55	ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ...	27	9.0
56	VIBA_VIBCH (Q56632) Vibriobactin-specific 2,3-dihydro-2,3-dihydr...	27	9.0
57	KCNH2_HUMAN (Q12809) Potassium voltage-gated channel subfamily H...	27	9.0
58	HXB8_MOUSE (P09632) Homeobox protein Hox-B8 (Hox-2.4)	27	9.0
59	HXB8_HUMAN (P17481) Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4)	27	9.0
60	YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11	27	9.0

>ACINU_HUMAN (Q9UKV3) Apoptotic chromatin condensation inducer in the nucleus|
           (Acinus)
          Length = 1341

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
 Frame = -2

Query: 372 GCREGSKTPHPPRLS-----SPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQ 208
           G +E SK+P PPRL+     + ++AL    A     P    PLL      PPP       
Sbjct: 379 GLKEKSKSPSPPRLTEDRKKASLVALPEQTASEEETPP---PLLTKEASSPPPHP----- 430

Query: 207 VAELKLKKHEIWSEMEGREAPLVEHGENPFTDAD 106
               +L   E    MEG   P++     P TDAD
Sbjct: 431 ----QLHSEEEIEPMEGPAPPVLIQLSPPNTDAD 460

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>NRX2B_HUMAN (P58401) Neurexin-2-beta precursor (Neurexin II-beta)|
          Length = 666

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = -2

Query: 393 P*PALELGCREGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKP 235
           P P L  G +   + P  P L +P L  GA  +  PRRP  LRP + S  G P
Sbjct: 510 PAPNLPAG-KMNHRDPLQPLLENPPLGPGAPTSFEPRRPPPLRPGVTSAPGFP 561

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>NRX2A_HUMAN (Q9P2S2) Neurexin-2-alpha precursor (Neurexin II-alpha)|
          Length = 1712

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = -2

Query: 393  P*PALELGCREGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKP 235
            P P L  G +   + P  P L +P L  GA  +  PRRP  LRP + S  G P
Sbjct: 1556 PAPNLPAG-KMNHRDPLQPLLENPPLGPGAPTSFEPRRPPPLRPGVTSAPGFP 1607

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>SOX14_DROME (P40656) Putative transcription factor SOX-14|
          Length = 472

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
 Frame = -2

Query: 345 HPPRLSSPMLALGATAAITPRRP----AGLRPLLHSCGGKPPPRNSLIQQVAELKLKKHE 178
           HP  ++SP   + A A  TP+ P           HS    PPPR S +          HE
Sbjct: 87  HPAAVASPSAPVAAAAPKTPKTPEPRSTHTHTHTHSQHFSPPPRESEMDGERSPSHSGHE 146

Query: 177 IWSEMEGREAPLV-------EHGENPFTDA 109
           +   M+G ++ LV        +   P++DA
Sbjct: 147 MTLSMDGIDSSLVFGSARVPVNSSTPYSDA 176

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>PAF49_HUMAN (O15446) RNA polymerase I-associated factor PAF49 (Anti-sense to|
           ERCC-1 protein) (ASE-1) (CD3-epsilon-associated protein)
           (CD3E-associated protein) (CAST)
          Length = 510

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = -2

Query: 300 AAITPRRPAGLRPLLHSCGGKPP---PRNSLIQQVAELKLKKHEIWSEMEGREAPLVEHG 130
           A+  P+ P GLRP   + GG PP   PR++L   +     KK     EM+  EAP+ +  
Sbjct: 135 ASPPPQIPPGLRPRFCAFGGNPPVTGPRSALAPNLLTSGKKK----KEMQVTEAPVTQEA 190

Query: 129 EN 124
            N
Sbjct: 191 VN 192

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>NRX2B_RAT (Q63376) Neurexin-2-beta precursor (Neurexin II-beta)|
          Length = 662

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -2

Query: 393 P*PALELGCREGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKP 235
           P P L  G +   + P  P L +P L  G   A  PRRP  LRP + S  G P
Sbjct: 506 PAPNLPAG-KMNHRDPLQPLLENPPLGPGVPTAFEPRRPPPLRPGVTSVPGFP 557

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>NRX2A_RAT (Q63374) Neurexin-2-alpha precursor (Neurexin II-alpha)|
          Length = 1715

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -2

Query: 393  P*PALELGCREGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKP 235
            P P L  G +   + P  P L +P L  G   A  PRRP  LRP + S  G P
Sbjct: 1559 PAPNLPAG-KMNHRDPLQPLLENPPLGPGVPTAFEPRRPPPLRPGVTSVPGFP 1610

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>RPOB_PSEAE (Q51561) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1357

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -2

Query: 213  QQVAELKLKKHEIWSEMEGREAPLVEHGENPFTD-ADGIRGG 91
            ++VAEL+   HEI++E+ GRE  L E G+N     A  +RGG
Sbjct: 1153 RKVAELRKFLHEIYNEIGGREENLDELGDNEILALAKNLRGG 1194

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>NEU2_MOUSE (P35455) Vasopressin-neurophysin 2-copeptin precursor (AVP-NPII)|
           [Contains: Arg-vasopressin; Neurophysin 2
           (Neurophysin-I); Copeptin]
          Length = 168

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI  +D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 47  PCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 101

Query: 293 MAAV 304
            AAV
Sbjct: 102 CAAV 105

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>AMPH_MOUSE (Q7TQF7) Amphiphysin|
          Length = 686

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -2

Query: 357 SKTPHPPRLSSPMLALGATA--AITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELKLKK 184
           +KTP PP   SP+ +  A+    + P  PA +RP   S   K PP   L +     +LK+
Sbjct: 258 AKTPSPPEEPSPLPSPTASPNHTLAPASPAPVRPRSPSQTRKGPPVPPLPKVTPTKELKQ 317

Query: 183 HEIWSEMEGREAP 145
             I +  E    P
Sbjct: 318 ENIINFFEDNFVP 330

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>GALP_ECOLI (P0AEP1) Galactose-proton symporter (Galactose transporter)|
          Length = 464

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 170 PRWRDARRRWWNTARILSRMQMESEEAKR 84
           PRW  A+RR+ +  R+L R++  S EAKR
Sbjct: 195 PRWFAAKRRFVDAERVLLRLRDTSAEAKR 223

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>GALP_ECOL6 (P0AEP2) Galactose-proton symporter (Galactose transporter)|
          Length = 464

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 170 PRWRDARRRWWNTARILSRMQMESEEAKR 84
           PRW  A+RR+ +  R+L R++  S EAKR
Sbjct: 195 PRWFAAKRRFVDAERVLLRLRDTSAEAKR 223

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>NEU2_RAT (P01186) Vasopressin-neurophysin 2-copeptin precursor (AVP-NPII)|
           [Contains: Arg-vasopressin; Neurophysin 2
           (Neurophysin-I); Copeptin]
          Length = 168

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI  +D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 47  PCGPGGKGRCFGPSICCADELGCFLGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 101

Query: 293 MAA 301
            AA
Sbjct: 102 CAA 104

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>NEU1_PIG (P01177) Oxytocin-neurophysin 1 precursor (OT-NPI) [Contains:|
           Oxytocin (Ocytocin); Neurophysin 1]
          Length = 125

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 43  PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSEGR 97

Query: 293 MAA 301
            AA
Sbjct: 98  CAA 100

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>NEU2_BALPH (P01184) Vasopressin-neurophysin 2 precursor [Contains:|
           Arg-vasopressin; Neurophysin 2] (Fragment)
          Length = 107

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 24  PCGPGGKGRCFGPSICCGDELGCFMGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 78

Query: 293 MAA 301
            AA
Sbjct: 79  CAA 81

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>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 83  PALPPLIPSASVKGFSPCSTSGASRPSISDQISCFFNFSSAT 208
           P  PP  P+A  KG+ P  +S +S  S S  +S  F+  S T
Sbjct: 514 PPGPPDPPAAFSKGYGPTPSSSSSPASTSVSVSTSFSLGSGT 555

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>AMPH_RAT (O08838) Amphiphysin|
          Length = 683

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = -2

Query: 357 SKTPHPPRLSSPMLALGATA--AITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELKLKK 184
           +KTP PP  +SP+ +  A+    + P  PA +RP   S   K PP   L +     +L++
Sbjct: 258 AKTPSPPEEASPLPSPTASPNHTLAPASPAPVRPRSPSQTRKGPPVPPLPKVTPTKELQQ 317

Query: 183 HEIWSEMEGREAP 145
             I +  E    P
Sbjct: 318 ENIINFFEDNFVP 330

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>NEU1_MOUSE (P35454) Oxytocin-neurophysin 1 precursor (OT-NPI) [Contains:|
           Oxytocin (Ocytocin); Neurophysin 1]
          Length = 125

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI  +D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 43  PCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 97

Query: 293 MAA 301
            AA
Sbjct: 98  CAA 100

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>NEU2_HORSE (P01182) Neurophysin 2 (Fragment)|
          Length = 92

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 9   PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 63

Query: 293 MAA 301
            AA
Sbjct: 64  CAA 66

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>NEU1_HORSE (P01176) Oxytocin-neurophysin 1 precursor (OT-NPI) [Contains:|
           Oxytocin (Ocytocin); Neurophysin 1] (Fragment)
          Length = 105

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 24  PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 78

Query: 293 MAA 301
            AA
Sbjct: 79  CAA 81

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>NEU2_PIG (P01183) Vasopressin-neurophysin 2-copeptin precursor (AVP-NPII)|
           [Contains: Lys-vasopressin; Neurophysin 2
           (Neurophysin-I/-III); Copeptin]
          Length = 166

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 43  PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 97

Query: 293 MAA 301
            AA
Sbjct: 98  CAA 100

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>NEU2_BOVIN (P01180) Vasopressin-neurophysin 2-copeptin precursor (AVP-NPII)|
           [Contains: Arg-vasopressin; Neurophysin 2
           (Neurophysin-II); Copeptin]
          Length = 166

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 43  PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 97

Query: 293 MAA 301
            AA
Sbjct: 98  CAA 100

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>NEU1_SHEEP (P13389) Oxytocin-neurophysin 1 precursor (OT-NPI) [Contains:|
           Oxytocin (Ocytocin); Neurophysin 1]
          Length = 125

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 43  PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCREENYL-----PSPCQSGQKPCGSGGR 97

Query: 293 MAA 301
            AA
Sbjct: 98  CAA 100

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>NEU1_BOVIN (P01175) Oxytocin-neurophysin 1 precursor (OT-NPI) [Contains:|
           Oxytocin (Ocytocin); Neurophysin 1]
          Length = 125

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 43  PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 97

Query: 293 MAA 301
            AA
Sbjct: 98  CAA 100

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>PAF49_MOUSE (Q76KJ5) RNA polymerase I-associated factor PAF49 (Anti-sense to|
           ERCC-1 protein) (ASE-1) (CD3-epsilon-associated protein)
           (CD3E-associated protein)
          Length = 399

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/54 (40%), Positives = 27/54 (50%)
 Frame = -2

Query: 393 P*PALELGCREGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPP 232
           P P+  L   EG   P    LS   L L  T+ + P+ PAGLRP   + GG PP
Sbjct: 109 PAPSGSLRIMEG---PQEYLLSRVPLQLIPTS-LPPQIPAGLRPRFSAFGGSPP 158

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>RL2_THEMA (P38510) 50S ribosomal protein L2|
          Length = 276

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 385 GARIRLQGGKQNPAPAQIEQPHAR-VGRHRGHHPSSAGGFAT 263
           G R  ++G   NP    ++ PH    GR +GHHP+S  G  T
Sbjct: 216 GRRPHVRGVAMNP----VDHPHGGGEGRGKGHHPTSPWGLPT 253

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>VE4_HPV57 (P22157) Probable protein E4|
          Length = 124

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 349 PAPAQIEQPHARVG--RHRGHHPSSAGGFATPTAFLWW*TSAEKLANSAGGRTEIKKT 182
           P P Q  +PH+R    RHR  HPS++G  +  +       S      S  GR  +K T
Sbjct: 50  PQPQQQSRPHSRTPPRRHRVRHPSASGSSSDSSG-----NSPTLRGRSEKGRWSVKTT 102

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>IP3KC_RAT (Q80ZG2) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (IP3K-C)
          Length = 678

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
 Frame = -2

Query: 363 EGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKP-PPRNSLIQQV----AE 199
           +GS     P+LSSP+  +    + T     G R  LH    +  P R SL  Q     + 
Sbjct: 116 DGSNLQTHPKLSSPLAEMEMAGSWTD----GFRTDLHRPDLQARPKRASLCTQPGFDESW 171

Query: 198 LKLKKHEIWSEMEGREAPLVEHGENPFTDADGIRGGKAGVPSCPALSP 55
            +L + E+W  +  R+ P V+H     T  D  R      P+CP+  P
Sbjct: 172 TELDRSELWQTLPERDKPWVDHLR---THQDMSR--LQNHPACPSPEP 214

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>NEU2_CAVPO (P10769) Vasopressin-neurophysin 2-copeptin precursor (AVP-NPII)|
           [Contains: Arg-vasopressin; Neurophysin 2
           (Neurophysin-II); Copeptin]
          Length = 144

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI  +D + CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 24  PCGPGGQGRCFGPSICCADALGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 78

Query: 293 MAA 301
            AA
Sbjct: 79  CAA 81

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>ARAF_HUMAN (P10398) A-Raf proto-oncogene serine/threonine-protein kinase (EC|
           2.7.11.1) (A-raf-1) (Proto-oncogene Pks)
          Length = 606

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = -2

Query: 279 PAGLRPLLHSCGGK----PPPRNSLIQQVAELKLKKHEIWSEMEGREAPLVE-HGENPFT 115
           P G  P    C  +    P P N+ +Q++         + S     ++ L++  G++  T
Sbjct: 182 PQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFST 241

Query: 114 DADGIRGGKAGVP 76
           DA G RGG  G P
Sbjct: 242 DAAGSRGGSDGTP 254

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>BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing protein 3|
          Length = 1205

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
 Frame = -2

Query: 372  GCREGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELK 193
            G R+ SK P PP L     A   +   +P  P  L+P+  S   KPP R         LK
Sbjct: 825  GDRDDSKLPPPPTLEPTGPAPSLSEQESPPEPPTLKPINDS---KPPSR--------FLK 873

Query: 192  LKKHEIWSEMEGREAPLVEHGENP---FTDADGIRGGKAGVPSCPALSPL 52
             +K E   E E  E   ++ G  P       +GI       P  PA +PL
Sbjct: 874  PRKVE---EDELLEKSPLQLGNEPLQRLLSDNGINRLSLMAPDTPAGTPL 920

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>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus|
           (Acinus)
          Length = 1338

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 35/140 (25%), Positives = 48/140 (34%), Gaps = 29/140 (20%)
 Frame = -2

Query: 387 PALELGCREGSKTPHPPRLSSPMLALGATAAITPRRPAG------LRPL-----LHSCG- 244
           P  + G RE   +PHP +L   +  L  T       PAG      + PL     L  C  
Sbjct: 456 PNTDAGAREPLASPHPAQLLRSLSPLSGTTDTKAESPAGRVSDESVLPLAQKSSLPECST 515

Query: 243 --------GKPPPRNSLIQQVAELK------LKKHEIWSEMEGREAP---LVEHGENPFT 115
                    K  P    +++ A  K      +KK  +  + EGR A      EH      
Sbjct: 516 QKGVESEREKSAPLPLTVEEFAPAKGITEEPMKKQSL-EQKEGRRASHALFPEHSGKQSA 574

Query: 114 DADGIRGGKAGVPSCPALSP 55
           D+   R       S P+ SP
Sbjct: 575 DSSSSRSSSPSSSSSPSRSP 594

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>NEU2_SHEEP (P01181) Vasopressin-neurophysin 2-copeptin precursor (AVP-NPII)|
           [Contains: Arg-vasopressin; Neurophysin 2
           (Neurophysin-III); Copeptin] (Fragment)
          Length = 147

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   D++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 24  PCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEEIYL-----PSPCQSGQKPCGSGGR 78

Query: 293 MAA 301
            AA
Sbjct: 79  CAA 81

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>ZCHC8_MOUSE (Q9CYA6) Zinc finger CCHC domain-containing protein 8|
          Length = 709

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
 Frame = -2

Query: 348 PHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVA----ELKLKKH 181
           P PP    P+         TP  P G  PL  S   +  P  S + + A    EL+ ++ 
Sbjct: 469 PLPPGTPPPLPQGTPPPLFTPPLPKGTPPLTPSDSPQARPAASAMDEDALTLEELEEQQR 528

Query: 180 EIWSEMEGREAPLVEHGENPFTDADG---IRGGKAGVPSCP 67
           +IW+ ++  E      G N  +D  G   + G       CP
Sbjct: 529 QIWAALQQAE------GGNGDSDVPGDTPLTGNSVASSPCP 563

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>NEU1_RAT (P01179) Oxytocin-neurophysin 1 precursor (OT-NPI) [Contains:|
           Oxytocin (Ocytocin); Neurophysin 1]
          Length = 125

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRG 289
           PC   G  R   PSI  +D++ CF   + A  C    +L     P  C  G+KP G  G
Sbjct: 43  PCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGG 96

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>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)|
          Length = 939

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -2

Query: 348 PHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVA 202
           P PP  + P  A GA  A     P G  P+       P P+ SL +Q A
Sbjct: 251 PRPP--AGPAAAAGAAPAAPGTAPGGTAPVPKEDSRLPAPKGSLAEQDA 297

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>SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4|
          Length = 385

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
 Frame = -2

Query: 360 GSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELKLKK- 184
           G+  P P     P +         PR  A + P  +  G +PPP +     +  + +   
Sbjct: 179 GAMEPSPRAQGHPSMGGPMQRVTPPRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPG 238

Query: 183 -HEIWSEMEGREAPLVEHGENPFTDADGIRGGKAGVPSCPA 64
               W+   G   P        +T   G  GG  G P  P+
Sbjct: 239 VRGPWASPSGNSIPYSSSSPGSYTGPPG-GGGPPGTPIMPS 278

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>ARHG1_MOUSE (Q61210) Rho guanine nucleotide exchange factor 1 (Lymphoid blast|
            crisis-like 2) (Lbc's second cousin)
          Length = 920

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 31/108 (28%), Positives = 38/108 (35%), Gaps = 2/108 (1%)
 Frame = -2

Query: 393  P*PALELGCREGSKTPHPPRLSSPMLALGAT--AAITPRRPAGLRPLLHSCGGKPPPRNS 220
            P PA  L  R    +   P LSS     G    A    R    L  LL  C  +P P   
Sbjct: 764  PAPASRLKPRPSPSSIREPLLSSSENGTGGAEMAPADARTERLLNDLLPFC--RPGPEGQ 821

Query: 219  LIQQVAELKLKKHEIWSEMEGREAPLVEHGENPFTDADGIRGGKAGVP 76
            L     +  L   +I    E       + G  P  D DG+ GG+A  P
Sbjct: 822  LAATALQKVLSLKQILLSTEE------DSGAGPPRDGDGVPGGRAPGP 863

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>NEU2_LOXAF (P81768) Neurophysin 2 (Neurophysin-II) (E-NP)|
          Length = 92

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +2

Query: 131 PCSTSGASR---PSI--SDQISCFFNFSSAT-C*ISEFLGGGLPPQECSRGRKPAGRRGV 292
           PC   G  R   PSI   +++ CF   + A  C    +L     P  C  G+KP G  G 
Sbjct: 12  PCGPGGKGRCFGPSICCGEELGCFVGTAEALRCQEENYL-----PSPCQSGQKPCGSGGR 66

Query: 293 MAA 301
            AA
Sbjct: 67  CAA 69

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>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -1

Query: 394 AVTGARIRLQGGKQNPAPAQIEQPHARVGRHRGHH 290
           AV  AR  LQ      AP  + QP    G+H GHH
Sbjct: 294 AVGTARAGLQPRADMAAPPTLPQPPCAHGQHYGHH 328

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>SF3B2_HUMAN (Q13435) Splicing factor 3B subunit 2 (Spliceosome-associated|
           protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing
           factor SF3b 145 kDa subunit)
          Length = 872

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -2

Query: 393 P*PALELGCREGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPP 229
           P P  ++G + G +TP  PR+++P+  +G T  + P      RP      G PPP
Sbjct: 181 PRPPQDMG-QIGVRTPLGPRVAAPVGPVGPTPTVLPMGAPVPRP-----RGPPPP 229

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>PCD16_HUMAN (Q96JQ0) Protocadherin-16 precursor (Dachsous 1) (Cadherin-19)|
            (Fibroblast cadherin 1)
          Length = 3298

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -2

Query: 354  KTPHP-PRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELKLKKHE 178
            + P P P  S+P LAL AT     R       +L+   G PPP  ++     E+++ +  
Sbjct: 1968 RLPRPGPSFSTPTLAL-ATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSP 2026

Query: 177  I 175
            +
Sbjct: 2027 V 2027

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>LPRE_MYCLE (Q9CC94) Putative lipoprotein lprE precursor|
          Length = 202

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 292 HPSSAGGFATPTAFLWW*TSAEKLANSAGG 203
           +PSS  G AT   F W   + E ++N AGG
Sbjct: 173 YPSSIDGLATAVRFHWNGNAVELISNIAGG 202

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>CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)|
          Length = 209

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
 Frame = -3

Query: 326 APCSRWA----PPRPSPLVGRRVCDPYCIL 249
           AP + W     PP PSPL+  R+ D Y IL
Sbjct: 110 APVTHWTDHPLPPLPSPLLPTRLPDDYIIL 139

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>PEX12_PICPA (Q01961) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome|
           assembly protein PAS10)
          Length = 409

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 6   QPNNPFSQLPLPPPTR--EEITQDRKV 80
           +P NPFS   LPPP    +++  DRK+
Sbjct: 299 KPRNPFSDSELPPPINLSKDLLADRKI 325

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>HSN2_RAT (Q6IFS7) Protein HSN2 precursor|
          Length = 434

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 125 FSPCSTSGASRPSISDQISCFFNFSSATC*ISEFLGGGLPPQECSRGRKPA 277
           F P S       S  ++ +C F F + T   S   GGG+ PQ   R R+ A
Sbjct: 245 FVPHSAPAVLTHSNENRSNCVFEFHAQTPSSSSGEGGGILPQRVYRNRQVA 295

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>PRGR_RABIT (P06186) Progesterone receptor (PR)|
          Length = 930

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
 Frame = +2

Query: 83  PALPPLIPSA----SVKGFSPCSTSGASRPSISDQISCFFNFSSATC*ISEFLGGGLPPQ 250
           P+LPP +PS+    +    SP S S +S  S    + C             +   G PPQ
Sbjct: 424 PSLPPRVPSSRPGEAAVAASPGSASVSSSSSSGSTLECIL-----------YKAEGAPPQ 472

Query: 251 ECSRGRKPAGRRGVMAAVAPNASM-XXXXXXXXXXXXPSLQP 373
           +      P    G  A + P   +             P+L P
Sbjct: 473 QGPFAPLPCKPPGAGACLLPRDGLPSTSASGAAAGAAPALYP 514

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>LEXA_CAUCR (Q9A724) LexA repressor (EC 3.4.21.88)|
          Length = 234

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 306 ATAAITPRRPAGLRPLLHSCGGKPPPRNS 220
           ATAA  P+     RP +   GG PPP  S
Sbjct: 73  ATAAAPPKGRGAFRPQVFEGGGAPPPAAS 101

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>ARAF_PIG (O19004) A-Raf proto-oncogene serine/threonine-protein kinase (EC|
           2.7.11.1) (A-Raf-1)
          Length = 606

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
 Frame = -2

Query: 354 KTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELKLKKHEI 175
           +TP    L+ P+   G ++    R P    P        P P N+ +Q++         +
Sbjct: 169 ETPSNRPLNEPLTPQGPSSCTQHRDPEHF-PF-------PAPANAPLQRIRSTSTPNVHM 220

Query: 174 WSEMEGREAPLVEHGENPF-TDADGIRGGKAGVP 76
            S     ++ LV+     F TDA G RGG  G P
Sbjct: 221 VSTTAPMDSGLVQLTAQSFNTDAAGNRGGGDGAP 254

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 9/42 (21%)
 Frame = -3

Query: 383  RSN*AAGREAKPRTRPD*A---------APCSRWAPPRPSPL 285
            RS+  +  EA+P T+PD A         AP +   PP PSP+
Sbjct: 1177 RSSQGSSTEAEPPTQPDGAGGGGSSPSPAPATSPVPPSPSPV 1218

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>TMM24_MOUSE (Q80X80) Transmembrane protein 24|
          Length = 706

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = +2

Query: 59  DNAGQEGTPALPPLIPSASVKG-----FSPCSTSGASRPSISD 172
           D+AG  G P+ PP  PSA+  G      SP S   A   + SD
Sbjct: 565 DDAGTSGGPSSPPSDPSATSPGPVDALSSPTSVQEADETTRSD 607

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>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)|
          Length = 907

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +2

Query: 101 IPSASVKGFSPCSTSGASRPSISDQISCFFNFSSATC*ISEFLGGGLPPQECSRGRKPAG 280
           +  AS+      ++S A RP  + Q S   N S++T      +  G PPQ  +  + P+G
Sbjct: 705 VTPASISTHHVSTSSPAPRPGTTSQASGPGNSSTSTKPGEVNVTKGTPPQNATSPQAPSG 764

Query: 281 RRGVMAAV 304
           ++  +  V
Sbjct: 765 QKTAVPTV 772

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>UNC52_CAEEL (Q06561) Basement membrane proteoglycan precursor (Perlecan homolog)|
            (Uncoordinated protein 52)
          Length = 3375

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 26/87 (29%), Positives = 33/87 (37%)
 Frame = -2

Query: 342  PPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELKLKKHEIWSEM 163
            PP  ++P   L  T   TP RP    PLL    G P   N +       +++    W   
Sbjct: 1775 PPVKTNPS-TLNVTPEGTPPRPVATPPLLSVAPGSPARFNCVAHSDTPARIR----WGFR 1829

Query: 162  EGREAPLVEHGENPFTDADGIRGGKAG 82
            E    PL EH      D D I   +AG
Sbjct: 1830 E-ENGPLPEHVNQ---DGDDIVISEAG 1852

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>PIVA2_ADE07 (P03273) Maturation protein (Protein IVA2)|
          Length = 448

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -2

Query: 156 REAPLVEHGENPFTDADGIRG---GKAGVPSCPAL 61
           R APL   G NP +DA  + G   G AG PS  +L
Sbjct: 28  RRAPLHRDGNNPDSDAATMEGSDPGSAGRPSSDSL 62

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>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 56   GDNAGQEGTPALPPLIPSASVKGFSPCSTSGASRPSISDQIS 181
            G  A     P+ PPL  S++V   S CSTSG      +D  S
Sbjct: 3644 GSRASAAKPPSFPPLSSSSTVTS-SSCSTSGVQPSMPTDDYS 3684

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>VIBA_VIBCH (Q56632) Vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate|
           dehydrogenase (EC 1.3.1.28)
          Length = 262

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
 Frame = -2

Query: 375 LGCREGSKTPHPPRLSSPMLALGATAAITPRRPAG--------LRPLLHSCGGKPPP--- 229
           L C +G  +    R    M+ +G+ AA TPR   G        L  L+   G +  P   
Sbjct: 122 LACMQGVASSMKARQQGSMVIIGSNAANTPRMSIGAYGASKAALHMLVKCIGMELAPYGI 181

Query: 228 RNSLIQQVAELKLKKHEIWSEMEG 157
           R +L+   +     + ++W+E  G
Sbjct: 182 RCNLVSPGSTRTAMQQQLWTEQYG 205

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>KCNH2_HUMAN (Q12809) Potassium voltage-gated channel subfamily H member 2|
            (Voltage-gated potassium channel subunit Kv11.1)
            (Ether-a-go-go related gene potassium channel 1) (H-ERG)
            (Erg1) (Ether-a-go-go related protein 1) (Eag-related
            protein 1) (eag homo
          Length = 1159

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/71 (25%), Positives = 28/71 (39%)
 Frame = -2

Query: 363  EGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPPPRNSLIQQVAELKLKK 184
            E S+   P R SSP+  +  ++   P  P G  PL+  C       N L    + +    
Sbjct: 939  ESSEDEGPGRSSSPLRLVPFSSPRPPGEPPGGEPLMEDCEKSSDTCNPLSGAFSGVS-NI 997

Query: 183  HEIWSEMEGRE 151
               W +  GR+
Sbjct: 998  FSFWGDSRGRQ 1008

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>HXB8_MOUSE (P09632) Homeobox protein Hox-B8 (Hox-2.4)|
          Length = 243

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -1

Query: 394 AVTGARIRLQGGKQNPAPAQI---EQPHARVGRHRGHHPSS 281
           A +G     +G +Q+P+P Q+    +P A  GR RG    S
Sbjct: 114 AASGLGEEAEGSEQSPSPTQLFPWMRPQAAAGRRRGRQTYS 154

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>HXB8_HUMAN (P17481) Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4)|
          Length = 243

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -1

Query: 394 AVTGARIRLQGGKQNPAPAQI---EQPHARVGRHRGHHPSS 281
           A +G     +G +Q+P+P Q+    +P A  GR RG    S
Sbjct: 114 AASGLGEEAEGSEQSPSPTQLFPWMRPQAAAGRRRGRQTYS 154

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>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11|
          Length = 154

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -2

Query: 366 REGSKTPHPPRLSSPMLALGATAAITPRRPAGLRPLLHSCGGKPP 232
           R  S +P  P  S+P  A  ++ A  P RPA   P  H      P
Sbjct: 5   RTASPSPSAPVRSAPRPAAQSSFAAPPPRPAAAAPAYHPPAAPTP 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,613,143
Number of Sequences: 219361
Number of extensions: 1150596
Number of successful extensions: 4852
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 4588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4848
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result