Clone Name | bastl28h01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RL5_THEVO (Q97BW3) 50S ribosomal protein L5P | 28 | 8.9 | 2 | AMPN_HAEIN (P45274) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoa... | 28 | 8.9 |
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>RL5_THEVO (Q97BW3) 50S ribosomal protein L5P| Length = 170 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +3 Query: 363 LPKEIFLKDYKKPDYLFD 416 L K +++KDYK PDY FD Sbjct: 75 LNKALYVKDYKIPDYSFD 92
>AMPN_HAEIN (P45274) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide| hydrolase) Length = 869 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 363 LPKEIFLKDYKKPDYLFDTVDLEFQL 440 L K + KDYK+PD+ + L+FQL Sbjct: 2 LAKAKYRKDYKQPDFTVTDIYLDFQL 27 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,216,900 Number of Sequences: 219361 Number of extensions: 1095290 Number of successful extensions: 2627 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2550 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2627 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)