ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl28f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 42 1.3
2ref|NM_185320.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
3ref|XM_283765.4| PREDICTED: Mus musculus RIKEN cDNA 5430433G21 g... 42 1.3
4gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 42 1.3
5emb|CR627301.1| Homo sapiens mRNA; cDNA DKFZp686A09128 (from clo... 42 1.3
6dbj|AK096929.1| Homo sapiens cDNA FLJ39610 fis, clone SKNSH2008777 42 1.3
7dbj|AK077398.1| Mus musculus 6 days neonate head cDNA, RIKEN ful... 42 1.3
8dbj|AK044859.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 42 1.3
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
10gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromoso... 42 1.3
11gb|AC099850.7| Homo sapiens chromosome 17, clone CTD-2510F5, com... 42 1.3
12dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
13gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.34... 42 1.3
14emb|AL928831.11| Mouse DNA sequence from clone RP23-296P2 on chr... 42 1.3
15ref|NM_193135.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
16gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
17gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
18gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complet... 40 5.3
19gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete... 40 5.3
20gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, co... 40 5.3
21gb|BC000348.2| Homo sapiens ribosomal protein L35, mRNA (cDNA cl... 40 5.3
22ref|NM_007209.3| Homo sapiens ribosomal protein L35 (RPL35), mRNA 40 5.3
23ref|XM_753604.1| Ustilago maydis 521 hypothetical protein (UM025... 40 5.3
24emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.3
25gb|AC134909.4| Mus musculus chromosome 3 clone RP23-402O2, compl... 40 5.3
26gb|BC002570.1| Homo sapiens cDNA clone IMAGE:3140974, **** WARNI... 40 5.3
27emb|AL354928.9| Human DNA sequence from clone RP11-175D17 on chr... 40 5.3
28gb|AC130797.5| Chlamydomonas reinhardtii clone cr-1j6b, complete... 40 5.3
29gb|AE012310.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.3
30gb|AC096975.5| Rattus norvegicus 2 BAC CH230-203P11 (Children's ... 40 5.3
31gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 5.3
32gb|AC010493.6|AC010493 Homo sapiens chromosome 5 clone CTD-2347I... 40 5.3
33dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
37gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, co... 40 5.3
38dbj|D28448.1|HUMRPL107 Homo sapiens mRNA for ribosomal protein L... 40 5.3
39dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
40gb|AF168615.1|AF168615 Rivulus marmoratus beta-actin gene, compl... 40 5.3
41dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.3
42dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
43dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
44dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
45dbj|AK121733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
46dbj|AK111502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
47ref|XM_314285.2| Anopheles gambiae str. PEST ENSANGP00000001136 ... 40 5.3
48dbj|AK106081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
49gb|AY104740.1| Zea mays PCO089073 mRNA sequence 40 5.3
50gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80... 40 5.3
51gb|BC010919.1| Homo sapiens ribosomal protein L35, mRNA (cDNA cl... 40 5.3 
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 306    ctgatggtggcggcggcgttggcgg 330
              |||||||||||||||| ||||||||
Sbjct: 405389 ctgatggtggcggcggtgttggcgg 405413
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>ref|NM_185320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 903

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 215 cgccaccgcctgccgcgcctc 235
           |||||||||||||||||||||
Sbjct: 444 cgccaccgcctgccgcgcctc 424
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>ref|XM_283765.4| PREDICTED: Mus musculus RIKEN cDNA 5430433G21 gene (5430433G21Rik),
            mRNA
          Length = 4160

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 312  gtggcggcggcgttggcggct 332
            |||||||||||||||||||||
Sbjct: 1470 gtggcggcggcgttggcggct 1490
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 216     gccaccgcctgccgcgcctct 236
               |||||||||||||||||||||
Sbjct: 4478303 gccaccgcctgccgcgcctct 4478323
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>emb|CR627301.1| Homo sapiens mRNA; cDNA DKFZp686A09128 (from clone DKFZp686A09128)
          Length = 4638

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 ggtggcggcggcgttggcggc 331
           |||||||||||||||||||||
Sbjct: 50  ggtggcggcggcgttggcggc 70
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>dbj|AK096929.1| Homo sapiens cDNA FLJ39610 fis, clone SKNSH2008777
          Length = 1808

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 ggtggcggcggcgttggcggc 331
           |||||||||||||||||||||
Sbjct: 41  ggtggcggcggcgttggcggc 61
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>dbj|AK077398.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched
           library, clone:5430433G21 product:hypothetical
           Thrombospondin type I domain containing protein, full
           insert sequence
          Length = 2957

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 312 gtggcggcggcgttggcggct 332
           |||||||||||||||||||||
Sbjct: 276 gtggcggcggcgttggcggct 296
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>dbj|AK044859.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130008H09
            product:unclassifiable, full insert sequence
          Length = 3073

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 312  gtggcggcggcgttggcggct 332
            |||||||||||||||||||||
Sbjct: 1267 gtggcggcggcgttggcggct 1287
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 215    cgccaccgcctgccgcgcctc 235
              |||||||||||||||||||||
Sbjct: 344196 cgccaccgcctgccgcgcctc 344176
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>gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromosome 7, complete
            sequence
          Length = 196949

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 146  ttcctccttcctccccacctt 166
            |||||||||||||||||||||
Sbjct: 4194 ttcctccttcctccccacctt 4174
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>gb|AC099850.7| Homo sapiens chromosome 17, clone CTD-2510F5, complete sequence
          Length = 210344

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   ttcctccttcctccccacctt 166
             |||||||||||||||||||||
Sbjct: 96162 ttcctccttcctccccacctt 96142
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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   cgccaccgcctgccgcgcctc 235
             |||||||||||||||||||||
Sbjct: 54149 cgccaccgcctgccgcgcctc 54129
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>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence
          Length = 168753

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   ggtggcggcggcgttggcggc 331
             |||||||||||||||||||||
Sbjct: 83617 ggtggcggcggcgttggcggc 83637
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>emb|AL928831.11| Mouse DNA sequence from clone RP23-296P2 on chromosome 2, complete
             sequence
          Length = 123116

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 312   gtggcggcggcgttggcggct 332
             |||||||||||||||||||||
Sbjct: 36219 gtggcggcggcgttggcggct 36239
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>ref|NM_193135.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1895

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 308 gatggtggcggcggcgttggcggc 331
           |||||||||||||||| |||||||
Sbjct: 193 gatggtggcggcggcggtggcggc 216
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>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11,
             complete sequence
          Length = 103615

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 310   tggtggcggcggcgttggcggctt 333
             |||||||||||||| |||||||||
Sbjct: 12725 tggtggcggcggcggtggcggctt 12702
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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0039A21, complete sequence
          Length = 139074

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 310   tggtggcggcggcgttggcggctt 333
             |||||||||||||| |||||||||
Sbjct: 98798 tggtggcggcggcggtggcggctt 98775
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>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence
          Length = 170327

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gtggcggcggcgttggcggc 331
              ||||||||||||||||||||
Sbjct: 104533 gtggcggcggcgttggcggc 104552
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>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence
          Length = 179099

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gtggcggcggcgttggcggc 331
              ||||||||||||||||||||
Sbjct: 152408 gtggcggcggcgttggcggc 152427
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>gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, complete sequence
          Length = 153145

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    gtgcgcgcgtacgtgcgtgc 88
             ||||||||||||||||||||
Sbjct: 45241 gtgcgcgcgtacgtgcgtgc 45260
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>gb|BC000348.2| Homo sapiens ribosomal protein L35, mRNA (cDNA clone MGC:8582
           IMAGE:2960987), complete cds
          Length = 509

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ggcggcggcgttggcggctt 333
           ||||||||||||||||||||
Sbjct: 6   ggcggcggcgttggcggctt 25
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>ref|NM_007209.3| Homo sapiens ribosomal protein L35 (RPL35), mRNA
          Length = 475

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ggcggcggcgttggcggctt 333
           ||||||||||||||||||||
Sbjct: 22  ggcggcggcgttggcggctt 41
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>ref|XM_753604.1| Ustilago maydis 521 hypothetical protein (UM02550.1) partial mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 gtggcggcggcgttggcggc 331
           ||||||||||||||||||||
Sbjct: 818 gtggcggcggcgttggcggc 837
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 312     gtggcggcggcgttggcggc 331
               ||||||||||||||||||||
Sbjct: 3124190 gtggcggcggcgttggcggc 3124171
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>gb|AC134909.4| Mus musculus chromosome 3 clone RP23-402O2, complete sequence
          Length = 183831

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    cttcctccttcctccccacc 164
              ||||||||||||||||||||
Sbjct: 119619 cttcctccttcctccccacc 119600
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>gb|BC002570.1| Homo sapiens cDNA clone IMAGE:3140974, **** WARNING: chimeric clone
            ****
          Length = 1740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  ggcggcggcgttggcggctt 333
            ||||||||||||||||||||
Sbjct: 1211 ggcggcggcgttggcggctt 1192
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>emb|AL354928.9| Human DNA sequence from clone RP11-175D17 on chromosome 9 Contains the 5'
              end of the NR6A1 gene for nuclear receptor (subfamily 6,
              group A) member 1, three novel genes, the RPL35 gene for
              ribosomal protein L35, the gene for a hypothetical protein
              similar to actin related protein 2/3 complex subunit 5
              (MGC3038), the 3' end of the GOLGA1 gene for golgi
              autoantigen (golgin subfamily a, 1) and six CpG islands,
              complete sequence
          Length = 176539

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    ggcggcggcgttggcggctt 333
              ||||||||||||||||||||
Sbjct: 121808 ggcggcggcgttggcggctt 121789
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>gb|AC130797.5| Chlamydomonas reinhardtii clone cr-1j6b, complete sequence
          Length = 80650

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    gtgcgcgcgtacgtgcgtgc 88
             ||||||||||||||||||||
Sbjct: 46687 gtgcgcgcgtacgtgcgtgc 46706
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>gb|AE012310.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 218
            of 460 of the complete genome
          Length = 10787

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 315  gcggcggcgttggcggcttc 334
            ||||||||||||||||||||
Sbjct: 7218 gcggcggcgttggcggcttc 7237
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>gb|AC096975.5| Rattus norvegicus 2 BAC CH230-203P11 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 213875

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   cctccttcctccccaccttg 167
             ||||||||||||||||||||
Sbjct: 25945 cctccttcctccccaccttg 25964
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 315     gcggcggcgttggcggcttc 334
               ||||||||||||||||||||
Sbjct: 2563245 gcggcggcgttggcggcttc 2563226
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>gb|AC010493.6|AC010493 Homo sapiens chromosome 5 clone CTD-2347I17, complete sequence
          Length = 93862

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cttcctccttcctccccacc 164
             ||||||||||||||||||||
Sbjct: 83805 cttcctccttcctccccacc 83786
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 309      atggtggcggcggcgttggcggct 332
                ||||||||||||||| ||||||||
Sbjct: 17087476 atggtggcggcggcggtggcggct 17087453
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 308      gatggtggcggcggcgttggcggc 331
                |||||||||||||||| |||||||
Sbjct: 26329196 gatggtggcggcggcggtggcggc 26329219
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 310      tggtggcggcggcgttggcggctt 333
                |||||||||||||| |||||||||
Sbjct: 18131543 tggtggcggcggcggtggcggctt 18131520
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 308      gatggtggcggcggcgttggcggc 331
                |||| |||||||||||||||||||
Sbjct: 24245403 gatgatggcggcggcgttggcggc 24245426
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>gb|AC021534.19| Homo sapiens chromosome 17, clone RP11-398J5, complete sequence
          Length = 185419

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    aggcacttcctccttcctccccac 163
              |||||| |||||||||||||||||
Sbjct: 148861 aggcacgtcctccttcctccccac 148884
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>dbj|D28448.1|HUMRPL107 Homo sapiens mRNA for ribosomal protein L35 homologue, 5'UTR region
          Length = 51

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ggcggcggcgttggcggctt 333
           ||||||||||||||||||||
Sbjct: 18  ggcggcggcgttggcggctt 37
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>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1332_C12
          Length = 67349

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   gatggtggcggcggcgttggcggc 331
             |||||||||||||||| |||||||
Sbjct: 48774 gatggtggcggcggcggtggcggc 48797
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>gb|AF168615.1|AF168615 Rivulus marmoratus beta-actin gene, complete cds
          Length = 1763

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 143 cacttcctccttcctcccca 162
           ||||||||||||||||||||
Sbjct: 547 cacttcctccttcctcccca 566
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     tggcggcggcgttggcggct 332
               ||||||||||||||||||||
Sbjct: 4042681 tggcggcggcgttggcggct 4042662



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     cgccaccgcctgccgcgcct 234
               ||||||||||||||||||||
Sbjct: 3456592 cgccaccgcctgccgcgcct 3456573
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0046B10
          Length = 142596

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   gatggtggcggcggcgttggcggc 331
             |||| |||||||||||||||||||
Sbjct: 69967 gatgatggcggcggcgttggcggc 69990
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>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1342C04
          Length = 172097

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   atggtggcggcggcgttggcggct 332
             ||||||||||||||| ||||||||
Sbjct: 28233 atggtggcggcggcggtggcggct 28210
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>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0025H07
          Length = 145605

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   atggtggcggcggcgttggcggct 332
             ||||||||||||||| ||||||||
Sbjct: 81135 atggtggcggcggcggtggcggct 81112
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>dbj|AK121733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083C10, full
           insert sequence
          Length = 1914

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 308 gatggtggcggcggcgttggcggc 331
           |||||||||||||||| |||||||
Sbjct: 194 gatggtggcggcggcggtggcggc 217
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>dbj|AK111502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P01, full
           insert sequence
          Length = 1739

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 308 gatggtggcggcggcgttggcggc 331
           |||| |||||||||||||||||||
Sbjct: 72  gatgatggcggcggcgttggcggc 49
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>ref|XM_314285.2| Anopheles gambiae str. PEST ENSANGP00000001136 (ENSANGG00000000975),
            partial mRNA
          Length = 9390

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 310  tggtggcggcggcgttggcg 329
            ||||||||||||||||||||
Sbjct: 9093 tggtggcggcggcgttggcg 9112
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>dbj|AK106081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A08, full
           insert sequence
          Length = 1895

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 308 gatggtggcggcggcgttggcggc 331
           |||||||||||||||| |||||||
Sbjct: 193 gatggtggcggcggcggtggcggc 216
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>gb|AY104740.1| Zea mays PCO089073 mRNA sequence
          Length = 985

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 tgcctgcaaggctgcaatca 197
           ||||||||||||||||||||
Sbjct: 342 tgcctgcaaggctgcaatca 323
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>gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80 of 83 of the complete
              sequence
          Length = 323775

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gtggcggcggcgttggcggc 331
              ||||||||||||||||||||
Sbjct: 318783 gtggcggcggcgttggcggc 318802
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>gb|BC010919.1| Homo sapiens ribosomal protein L35, mRNA (cDNA clone MGC:13488
           IMAGE:4251487), complete cds
          Length = 483

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ggcggcggcgttggcggctt 333
           ||||||||||||||||||||
Sbjct: 22  ggcggcggcgttggcggctt 41


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,041,183
Number of Sequences: 3902068
Number of extensions: 3041183
Number of successful extensions: 75303
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74618
Number of HSP's gapped (non-prelim): 685
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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