Clone Name | bastl28f08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NEDD1_HUMAN (Q8NHV4) Protein NEDD1 | 28 | 6.7 | 2 | YFHE_SCHPO (O42851) Hypothetical protein C23A1.14c in chromosome I | 28 | 8.8 |
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>NEDD1_HUMAN (Q8NHV4) Protein NEDD1| Length = 660 Score = 28.5 bits (62), Expect = 6.7 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +3 Query: 30 FLTGSPIQSKVDLYSMDASLSSIPFGHG 113 ++ + ++ L+S+ +LSS PFGHG Sbjct: 133 YIASGSLSGEIILHSVTTNLSSTPFGHG 160
>YFHE_SCHPO (O42851) Hypothetical protein C23A1.14c in chromosome I| Length = 398 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 314 NLLLISQTVPK*CCCCVKYMWHASS 388 ++LL S TV K CC +KY HA+S Sbjct: 327 SVLLKSDTVAKHLCCELKYFHHATS 351 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,633,601 Number of Sequences: 219361 Number of extensions: 957868 Number of successful extensions: 1400 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1388 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1400 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)