>LONH2_MAIZE (P93648) Lon protease homolog 2, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 964

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 52/105 (49%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = +1

Query: 100 EEMRSPLLRVFGSLRGGRSSVM-GRRARFCSSFXXXXXXXXXXXXXXXXXXXXXXXXXXX 276
           EE+RSPLLRV G+LR GR SV+ GRR RFCS+                            
Sbjct: 10  EELRSPLLRVIGTLRDGRGSVLLGRRVRFCSN-SSASDTEAAVAEAEAKAEDASAAEGEA 68

Query: 277 XXXXXXXIVSTNPRPEDFLSVIALPLPHRPLFPGFYMPIYVKDLK 411
                  IV T+   +D LSVIALPLPHRPLFPGFYMPI VKD K
Sbjct: 69  DSKASSAIVPTSTNIDDCLSVIALPLPHRPLFPGFYMPINVKDQK 113

>LONH2_ARATH (P93655) Lon protease homolog 2, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 940

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 44/104 (42%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
 Frame = +1

Query: 106 MRSPLLRVFGSLRGG--RSSVMGRRARFCSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
           + SPL +    + G   RS+ +G RA FCS                              
Sbjct: 27  VESPLFKALSQITGWNRRSTSLGHRAFFCSE------PTNGEAAAEAETKAVESDSEVSD 80

Query: 280 XXXXXXIVSTNPRPEDFLSVIALPLPHRPLFPGFYMPIYVKDLK 411
                 IV TNPRPED L+V+ALP+PHRPLFPGFYMPIYVKD K
Sbjct: 81  SKSSSAIVPTNPRPEDCLTVLALPVPHRPLFPGFYMPIYVKDPK 124

>LONH3_ARATH (Q9M9L8) Putative Lon protease homolog 3, mitochondrial precursor|
           (EC 3.4.21.-)
          Length = 924

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +1

Query: 298 IVSTNPRPEDFLSVIALPLPHRPLFPGFYMPIYVKDLK 411
           I+STNP  +D L+VIALPLPH+PL PGFYMPI+VKD K
Sbjct: 99  ILSTNPNLDDSLTVIALPLPHKPLIPGFYMPIHVKDPK 136

>LONH4_ARATH (Q9M9L7) Putative Lon protease homolog 4, mitochondrial precursor|
           (EC 3.4.21.-)
          Length = 942

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +1

Query: 301 VSTNPRPEDFLSVIALPLPHRPLFPGFYMPIYVKDLK 411
           VS  P  +D L+VIALPLPH+PL PGFYMPIYVKD K
Sbjct: 67  VSAKPHLDDCLTVIALPLPHKPLIPGFYMPIYVKDPK 103

>LONM_YEAST (P36775) Lon protease homolog, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 1133

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 319 PEDFLSVIALPLPHRPLFPGFYMPIYVKD 405
           PE +  ++ALP+  RPLFPGFY  + + D
Sbjct: 176 PEVYPQMLALPIARRPLFPGFYKAVVISD 204

>LONM_SCHPO (Q09769) Putative Lon protease homolog, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 1067

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 319 PEDFLSVIALPLPHRPLFPGFYMPIYVKD 405
           P+ +  ++ALP+  RPLFPGFY  I  K+
Sbjct: 156 PDVYPQLLALPIARRPLFPGFYKAIVTKN 184

>SETBP_MOUSE (Q9Z180) SET-binding protein (SEB)|
          Length = 1535

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 185 QKRARLPITELRPPLSDPKT 126
           +KR R P TEL PP  +PKT
Sbjct: 669 KKRGRKPRTELPPPSEEPKT 688

>LON_TREPA (O83536) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 881

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 346 LPLPHRPLFPGFYMPIYVKD 405
           +PL  RP++PG + P+ + D
Sbjct: 97  IPLTGRPIYPGIFTPLLISD 116


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,951,593
Number of Sequences: 219361
Number of extensions: 292432
Number of successful extensions: 1176
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)