Clone Name | bastl28f05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccaccgccgcccccgc 110 |||||||||||||||||||| Sbjct: 147819 cctcccaccgccgcccccgc 147800
>ref|XM_418829.1| PREDICTED: Gallus gallus similar to MLN64 N-terminal homolog; MLN64 N-terminal domain homolog (LOC420730), mRNA Length = 1531 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gccgcccccgcgcctcgcgtcacc 123 |||||||||||||| ||||||||| Sbjct: 57 gccgcccccgcgccgcgcgtcacc 34
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccaccgccgcccccgc 110 |||||||||||||||||||| Sbjct: 38740 cctcccaccgccgcccccgc 38721
>gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, complete sequence Length = 236143 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgcccccgcgcctcgc 117 |||||||||||||||||||| Sbjct: 51057 ccgccgcccccgcgcctcgc 51038
>ref|NM_033113.1| Homo sapiens zinc finger protein 628 (ZNF628), mRNA Length = 3864 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 cctcccaccgccgcccccgcgcct 114 |||||| ||||||||||||||||| Sbjct: 1592 cctcccgccgccgcccccgcgcct 1615
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cccaccgccgcccccgcgcc 113 |||||||||||||||||||| Sbjct: 2492772 cccaccgccgcccccgcgcc 2492753
>gb|AC008735.9| Homo sapiens chromosome 19 clone CTD-2537I9, complete sequence Length = 223879 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 cctcccaccgccgcccccgcgcct 114 |||||| ||||||||||||||||| Sbjct: 194114 cctcccgccgccgcccccgcgcct 194091
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cccaccgccgcccccgcgcc 113 |||||||||||||||||||| Sbjct: 86481 cccaccgccgcccccgcgcc 86462
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cccaccgccgcccccgcgcc 113 |||||||||||||||||||| Sbjct: 43392 cccaccgccgcccccgcgcc 43411
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccaccgccgcccccgc 110 |||||||||||||||||||| Sbjct: 28720027 cctcccaccgccgcccccgc 28720008
>gb|BC089449.1| Homo sapiens zinc finger protein 628, mRNA (cDNA clone MGC:105139 IMAGE:30560806), complete cds Length = 3864 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 cctcccaccgccgcccccgcgcct 114 |||||| ||||||||||||||||| Sbjct: 1592 cctcccgccgccgcccccgcgcct 1615
>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence Length = 94287 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gcccgcagcgcgcagccgaa 83 |||||||||||||||||||| Sbjct: 2914 gcccgcagcgcgcagccgaa 2895
>emb|BX935588.1| Gallus gallus finished cDNA, clone ChEST84d7 Length = 1530 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 gccgcccccgcgcctcgcgtcacc 123 |||||||||||||| ||||||||| Sbjct: 57 gccgcccccgcgccgcgcgtcacc 34
>dbj|AK102861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111I03, full insert sequence Length = 3066 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cctcccaccgccgcccccgc 110 |||||||||||||||||||| Sbjct: 214 cctcccaccgccgcccccgc 195
>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135105 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cgccgcccccgcgcctcgcg 118 |||||||||||||||||||| Sbjct: 126893 cgccgcccccgcgcctcgcg 126874
>emb|AL671899.11| Mouse DNA sequence from clone RP23-27B23 on chromosome 3, complete sequence Length = 132775 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgcccccgcgcctcgc 117 |||||||||||||||||||| Sbjct: 22696 ccgccgcccccgcgcctcgc 22677
>emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chromosome 2, complete sequence Length = 169281 Score = 40.1 bits (20), Expect = 3.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 ggggtttgctggtcggcggccgcggcgg 160 ||||||||||| ||||||||||||||| Sbjct: 52461 ggggtttgctgcacggcggccgcggcgg 52488 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,974,111 Number of Sequences: 3902068 Number of extensions: 10974111 Number of successful extensions: 97874 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97792 Number of HSP's gapped (non-prelim): 82 length of query: 238 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 216 effective length of database: 17,147,199,772 effective search space: 3703795150752 effective search space used: 3703795150752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)