>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor|
          Length = 1943

 Score = 25.0 bits (53), Expect(2) = 5.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 206  ALAPLAGETSFSTATKVSRPSWFAPP 283
            A A  A ET+F+T    S P W A P
Sbjct: 1838 ASATHARETTFTTQPPASNPQWGAEP 1863



 Score = 21.6 bits (44), Expect(2) = 5.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 12   PNADRPRPTTNSIARAHPPESLIGTAKP*TLP 107
            PN   P+  T S+  + PP S +    P +LP
Sbjct: 1773 PNPPPPQLVTFSLPISTPPTSSLPLPPPLSLP 1804


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,413,426
Number of Sequences: 219361
Number of extensions: 315192
Number of successful extensions: 977
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)