ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl28d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ141104.1| Drosophila ananassae Dscam gene, partial sequence 42 1.4
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
3gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic ... 42 1.4
4gb|AC107859.7| Mus musculus chromosome 15, clone RP23-19C9, comp... 42 1.4
5emb|AL645636.22| Mouse DNA sequence from clone RP23-337B10 on ch... 42 1.4
6gb|DQ317107.1| Drosophila ananassae Dscam gene, exons 3 through 24 42 1.4
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
8gb|AC006927.27| Homo sapiens 12 BAC RP11-444J21 (Roswell Park Ca... 42 1.4
9gb|AF129407.1|AF129407 Bos gaurus satellite DNA sequence 42 1.4
10gb|U65479.1|SCU65479 Scapophyllia cylindrica 18S ribosomal RNA g... 42 1.4
11ref|XM_465275.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
12gb|AY023074.1| Oryza sativa microsatellite MRG5399 containing (G... 40 5.7
13gb|AY022737.1| Oryza sativa microsatellite MRG5062 containing (C... 40 5.7
14gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
15gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
16gb|AC067970.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 5.7
17gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosom... 40 5.7
18gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome... 40 5.7
19gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosom... 40 5.7
20gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complet... 40 5.7
21emb|AL645819.1| Human DNA sequence from clone RP1-256K24 on chro... 40 5.7
22emb|AL158067.18| Human DNA sequence from clone RP11-86C3 on chro... 40 5.7
23emb|X60204.1|ZMWHPCS Z.mays whp (white pollen) gene for chalcone... 40 5.7
24emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 ... 40 5.7
25gb|AC112136.6| Homo sapiens 3 BAC RP11-360A12 (Roswell Park Canc... 40 5.7
26gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer... 40 5.7
27gb|AE002160.2| Chlamydia muridarum Nigg, complete genome 40 5.7
28gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, co... 40 5.7
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
35gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome... 40 5.7
36gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 5.7
37gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 5.7
38dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
39dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
40dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
41dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
42dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
43dbj|AK070971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
44dbj|AK061156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
45gb|AF525209.1| Salmo salar clone SsaD48 microsatellite sequence 40 5.7
46gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, co... 40 5.7
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
48emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260... 40 5.7
49emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
50dbj|AP004962.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.7
51emb|AL845305.5| Mouse DNA sequence from clone RP23-202K13 on chr... 40 5.7
52emb|AL845173.4| Mouse DNA sequence from clone RP23-322G1 on chro... 40 5.7
53emb|Z72004.1|HSJ256K2A Human DNA sequence from cosmid J256K24, b... 40 5.7 
>gb|DQ141104.1| Drosophila ananassae Dscam gene, partial sequence
          Length = 57036

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    caggctagctagctagctagc 101
             |||||||||||||||||||||
Sbjct: 13013 caggctagctagctagctagc 13033
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 80       ccaggctagctagctagctag 100
                |||||||||||||||||||||
Sbjct: 30196818 ccaggctagctagctagctag 30196798
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>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete
             sequence
          Length = 163972

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    ccaggctagctagctagctag 100
             |||||||||||||||||||||
Sbjct: 27077 ccaggctagctagctagctag 27097
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>gb|AC107859.7| Mus musculus chromosome 15, clone RP23-19C9, complete sequence
          Length = 208355

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 79     gccaggctagctagctagctagccc 103
              ||||||| |||||||||||||||||
Sbjct: 101614 gccaggcaagctagctagctagccc 101638
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>emb|AL645636.22| Mouse DNA sequence from clone RP23-337B10 on chromosome 11 Contains the
             5' end of the gene for a novel protein similar to Tensin
             Tns and a CpG island, complete sequence
          Length = 128681

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 389   ctccaacgatgcttcacacag 409
             |||||||||||||||||||||
Sbjct: 16083 ctccaacgatgcttcacacag 16103
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>gb|DQ317107.1| Drosophila ananassae Dscam gene, exons 3 through 24
          Length = 47242

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 81   caggctagctagctagctagc 101
            |||||||||||||||||||||
Sbjct: 1556 caggctagctagctagctagc 1576
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 80       ccaggctagctagctagctag 100
                |||||||||||||||||||||
Sbjct: 30288240 ccaggctagctagctagctag 30288220
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>gb|AC006927.27| Homo sapiens 12 BAC RP11-444J21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 114701

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   tcctcctactcctgcctcagc 201
             |||||||||||||||||||||
Sbjct: 62951 tcctcctactcctgcctcagc 62971
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>gb|AF129407.1|AF129407 Bos gaurus satellite DNA sequence
          Length = 441

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gctagctagctagctagcccg 104
           |||||||||||||||||||||
Sbjct: 144 gctagctagctagctagcccg 164
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>gb|U65479.1|SCU65479 Scapophyllia cylindrica 18S ribosomal RNA gene, partial sequence,
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           internal transcribed spacer 2, complete sequence, and
           28S ribosomal RNA gene, partial sequence
          Length = 1042

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  caggctagctagctagctagc 101
           |||||||||||||||||||||
Sbjct: 255 caggctagctagctagctagc 275
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>ref|XM_465275.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  aggctagctagctagctagc 101
           ||||||||||||||||||||
Sbjct: 882 aggctagctagctagctagc 901
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>gb|AY023074.1| Oryza sativa microsatellite MRG5399 containing (GAG)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  gctagctagctagctagccc 103
           ||||||||||||||||||||
Sbjct: 29  gctagctagctagctagccc 10
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>gb|AY022737.1| Oryza sativa microsatellite MRG5062 containing (CCT)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  gctagctagctagctagccc 103
           ||||||||||||||||||||
Sbjct: 197 gctagctagctagctagccc 216
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09,
              complete sequence
          Length = 155525

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     aggctagctagctagctagc 101
              ||||||||||||||||||||
Sbjct: 152505 aggctagctagctagctagc 152524
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>gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0048K05, complete sequence
          Length = 104254

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    aggctagctagctagctagc 101
             ||||||||||||||||||||
Sbjct: 24666 aggctagctagctagctagc 24685
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>gb|AC067970.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13M22, complete
              sequence
          Length = 151530

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gccaggctagctagctagct 98
              ||||||||||||||||||||
Sbjct: 108521 gccaggctagctagctagct 108502
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>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence
          Length = 208404

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 84    gctagctagctagctagcccgcca 107
             ||||||||||||||||||| ||||
Sbjct: 15291 gctagctagctagctagccagcca 15314
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>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 84    gctagctagctagctagcccgcca 107
             ||||||||||||||||||| ||||
Sbjct: 75997 gctagctagctagctagccagcca 76020
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>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence
          Length = 181083

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gccaggctagctagctagct 98
             ||||||||||||||||||||
Sbjct: 62867 gccaggctagctagctagct 62848
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>gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complete sequence
          Length = 176278

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     gctagctagctagctagcccgcca 107
              ||||||||||||||||||| ||||
Sbjct: 168282 gctagctagctagctagccagcca 168305
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>emb|AL645819.1| Human DNA sequence from clone RP1-256K24 on chromosome X, complete
             sequence
          Length = 94973

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   aaagaggaagtggatatttg 376
             ||||||||||||||||||||
Sbjct: 49605 aaagaggaagtggatatttg 49624
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>emb|AL158067.18| Human DNA sequence from clone RP11-86C3 on chromosome 13, complete
             sequence
          Length = 165230

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   acatgaatgttctggaggga 297
             ||||||||||||||||||||
Sbjct: 60211 acatgaatgttctggaggga 60192
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>emb|X60204.1|ZMWHPCS Z.mays whp (white pollen) gene for chalcone synthase
          Length = 4069

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   gctagctagctagctagccc 103
            ||||||||||||||||||||
Sbjct: 2288 gctagctagctagctagccc 2307
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>emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 in linkage group 16,
             complete sequence
          Length = 148046

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 78    agccaggctagctagctagctagc 101
             ||||||||||||||| ||||||||
Sbjct: 33309 agccaggctagctagttagctagc 33286
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>gb|AC112136.6| Homo sapiens 3 BAC RP11-360A12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 43707

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   ggatatttgccccacaagat 387
             ||||||||||||||||||||
Sbjct: 27315 ggatatttgccccacaagat 27334
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>gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 118301

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    gaataaagaggaagtggata 372
              ||||||||||||||||||||
Sbjct: 105948 gaataaagaggaagtggata 105967
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>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    taaagaggaagtggatattt 375
              ||||||||||||||||||||
Sbjct: 191916 taaagaggaagtggatattt 191935
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>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence
          Length = 196206

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 177    tccctcctcctactcctgcctcag 200
              |||||||| |||||||||||||||
Sbjct: 119779 tccctccttctactcctgcctcag 119802
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       gctagctagctagctagccc 103
                ||||||||||||||||||||
Sbjct: 13727772 gctagctagctagctagccc 13727791
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 82       aggctagctagctagctagc 101
                ||||||||||||||||||||
Sbjct: 24269448 aggctagctagctagctagc 24269429
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       gctagctagctagctagccc 103
                ||||||||||||||||||||
Sbjct: 14344593 gctagctagctagctagccc 14344612
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 82       aggctagctagctagctagc 101
                ||||||||||||||||||||
Sbjct: 24638329 aggctagctagctagctagc 24638348
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 82       aggctagctagctagctagc 101
                ||||||||||||||||||||
Sbjct: 13014464 aggctagctagctagctagc 13014483
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 83       ggctagctagctagctagcccgcc 106
                ||||||||||| ||||||||||||
Sbjct: 27950176 ggctagctagcaagctagcccgcc 27950153



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      gctagctagctagctagccc 103
               ||||||||||||||||||||
Sbjct: 6602274 gctagctagctagctagccc 6602255
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>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete
            sequence
          Length = 199295

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 84   gctagctagctagctagcccgcca 107
            ||||||||||||||||||| ||||
Sbjct: 4916 gctagctagctagctagccagcca 4893
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>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete
              sequence
          Length = 223861

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gccaggctagctagctagct 98
              ||||||||||||||||||||
Sbjct: 206695 gccaggctagctagctagct 206676
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>gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone rp23-426k2, complete
              sequence
          Length = 213098

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     gccaggctagctagctagct 98
              ||||||||||||||||||||
Sbjct: 211629 gccaggctagctagctagct 211648
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>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0483F08
          Length = 148985

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    gctagctagctagctagccc 103
             ||||||||||||||||||||
Sbjct: 82445 gctagctagctagctagccc 82426
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>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144G04
          Length = 194459

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     ggctagctagctagctagcccgcc 106
              ||||||||||| ||||||||||||
Sbjct: 136857 ggctagctagcaagctagcccgcc 136834
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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1261_A08
          Length = 162113

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     gctagctagctagctagccc 103
              ||||||||||||||||||||
Sbjct: 161138 gctagctagctagctagccc 161157
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    gctagctagctagctagccc 103
             ||||||||||||||||||||
Sbjct: 36396 gctagctagctagctagccc 36415
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0688H12
          Length = 139279

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     aggctagctagctagctagc 101
              ||||||||||||||||||||
Sbjct: 124107 aggctagctagctagctagc 124126
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>dbj|AK070971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074K10, full
           insert sequence
          Length = 2396

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  gctagctagctagctagccc 103
           ||||||||||||||||||||
Sbjct: 159 gctagctagctagctagccc 140
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>dbj|AK061156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G04, full
           insert sequence
          Length = 1038

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  aggctagctagctagctagc 101
           ||||||||||||||||||||
Sbjct: 882 aggctagctagctagctagc 901
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>gb|AF525209.1| Salmo salar clone SsaD48 microsatellite sequence
          Length = 480

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  aggctagctagctagctagc 101
           ||||||||||||||||||||
Sbjct: 72  aggctagctagctagctagc 91
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>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence
          Length = 215363

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     gctagctagctagctagcccgcca 107
              ||||||||||||||||||| ||||
Sbjct: 101211 gctagctagctagctagccagcca 101234
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 82       aggctagctagctagctagc 101
                ||||||||||||||||||||
Sbjct: 24197654 aggctagctagctagctagc 24197635
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>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    aggctagctagctagctagc 101
             ||||||||||||||||||||
Sbjct: 46222 aggctagctagctagctagc 46203
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>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09,
              complete sequence
          Length = 187359

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     gctagctagctagctagccc 103
              ||||||||||||||||||||
Sbjct: 122380 gctagctagctagctagccc 122399
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>dbj|AP004962.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT28H14, TM0141,
             complete sequence
          Length = 100810

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    aggctagctagctagctagc 101
             ||||||||||||||||||||
Sbjct: 57724 aggctagctagctagctagc 57743
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>emb|AL845305.5| Mouse DNA sequence from clone RP23-202K13 on chromosome 2, complete
              sequence
          Length = 200141

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    aagaggaagtggatatttgc 377
              ||||||||||||||||||||
Sbjct: 183343 aagaggaagtggatatttgc 183324
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>emb|AL845173.4| Mouse DNA sequence from clone RP23-322G1 on chromosome 2, complete
              sequence
          Length = 194770

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 178    ccctcctcctactcctgcctcagc 201
              ||||||||| ||||||||||||||
Sbjct: 100618 ccctcctccaactcctgcctcagc 100595
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>emb|Z72004.1|HSJ256K2A Human DNA sequence from cosmid J256K24, between markers DXS6791 and
             DXS8038 on chromosome X contains EST and STSs
          Length = 63646

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   aaagaggaagtggatatttg 376
             ||||||||||||||||||||
Sbjct: 45369 aaagaggaagtggatatttg 45350


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,154,980
Number of Sequences: 3902068
Number of extensions: 4154980
Number of successful extensions: 108546
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107354
Number of HSP's gapped (non-prelim): 1116
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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