ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl28d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474048.1| Oryza sativa (japonica cultivar-group), predic... 258 2e-65
2ref|XM_480336.1| Oryza sativa (japonica cultivar-group), mRNA 186 5e-44
3dbj|AK110978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 5e-44
4ref|XM_480334.1| Oryza sativa (japonica cultivar-group), mRNA 178 1e-41
5dbj|AK103236.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
6dbj|AB047689.2| Oryza sativa mRNA for PolI-like DNA polymerase, ... 178 1e-41
7emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 155 2e-34
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
10dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
11dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
12emb|CR937053.2|RN476F3 Rattus norvegicus chromosome 1 BAC CH230-... 46 0.11
13emb|BX470195.10| Mouse DNA sequence from clone RP23-4K22 on chro... 46 0.11
14gb|AC010744.7| Homo sapiens BAC clone RP11-548D17 from 2, comple... 44 0.44
15gb|AC093761.3| Homo sapiens BAC clone RP11-89I4 from 4, complete... 42 1.7
16gb|AC101794.5| Mus musculus chromosome 1, clone RP24-188N24, com... 40 6.9
17gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 6.9
18gb|AC109153.13| Mus musculus chromosome 15, clone RP23-51J23, co... 40 6.9
19gb|AC131941.1| Mus musculus BAC clone RP23-109A19 from 1, comple... 40 6.9
20emb|AL161723.12| Human DNA sequence from clone RP13-172P13 on ch... 40 6.9
21ref|XM_777562.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.9
22gb|S74562.1| gag=Gag...pol [human T-lymphotropic virus type 1 HT... 40 6.9
23gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J... 40 6.9
24tpg|BK000520.1| TPA: TPA_exp: Mus musculus matriptase 2 gene, co... 40 6.9
25gb|AC034246.4|AC034246 Homo sapiens chromosome 5 clone RP11-160F... 40 6.9
26dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 6.9
27gb|AC008960.6|AC008960 Homo sapiens chromosome 5 clone CTD-2354D... 40 6.9
28emb|BX072583.7| Zebrafish DNA sequence from clone CH211-185M2 in... 40 6.9
29emb|BX682529.6| Zebrafish DNA sequence from clone CH211-194P13 i... 40 6.9
30emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 i... 40 6.9
31emb|AL590144.10| Mouse DNA sequence from clone RP23-79F10 on chr... 40 6.9
32gb|AC160528.9| Mus musculus chromosome 15, clone RP23-310L8, com... 40 6.9 
>ref|XM_474048.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3003

 Score =  258 bits (130), Expect = 2e-65
 Identities = 289/342 (84%)
 Strand = Plus / Plus

                                                                       
Query: 166 cagtttgatgacttggctatagatggttataatggagctgagcatgaatgcacagccaag 225
           ||||||||||||   ||||  ||||||||| |||||| ||| ||||||||||||||||||
Sbjct: 628 cagtttgatgacaaagctagggatggttatgatggagatgaacatgaatgcacagccaag 687

                                                                       
Query: 226 acagcggtgcagcctcctccagctaaagcccccttgtctgaggaggctaaagatgcacgg 285
           |   | || ||   | |||||||||| || ||| ||||  ||||| ||||||||||  ||
Sbjct: 688 aatacagtacaagattctccagctaaggcacccatgtccaaggagtctaaagatgcgagg 747

                                                                       
Query: 286 aaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaatcagctagg 345
           ||||| ||||||||  | |||||||||||||||||||||||||  ||  | |||||||||
Sbjct: 748 aaggcacttgctactgtgtacgacaaagttctggtggttgacaatgtgaagtcagctagg 807

                                                                       
Query: 346 agcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtgacacagag 405
           || |||||||| || |||||  |||||||||| | |||||||||||||||||||||||||
Sbjct: 808 agtgttgttcaattgcttacttcaaagtacaaaaactttattcatgcatgtgacacagag 867

                                                                       
Query: 406 gtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtcacatgcttt 465
           ||  | |||||||||||||||||||||||||||||| |||||||||| ||||  ||||||
Sbjct: 868 gtagctaatattgatgttaaacaagagacaccagttagccatggagaggtcatttgcttt 927

                                                     
Query: 466 agcatctattctgccagttctgatgctgaagctgattttgga 507
           |||||||| |||| ||  |||||||| |||||||||||||||
Sbjct: 928 agcatctactctggcaactctgatgcagaagctgattttgga 969
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>ref|XM_480336.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3108

 Score =  186 bits (94), Expect = 5e-44
 Identities = 196/230 (85%)
 Strand = Plus / Plus

                                                                       
Query: 278 atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
           |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 725 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 784

                                                                       
Query: 338 cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
           |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 785 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 844

                                                                       
Query: 398 acacagaggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtca 457
           |||| |||||| ||||||||||||| ||| ||||||| |||||||| |||||||| || |
Sbjct: 845 acacggaggtggcaaatattgatgtcaaagaagagacgccagttggtcatggagaagtaa 904

                                                             
Query: 458 catgctttagcatctattctgccagttctgatgctgaagctgattttgga 507
            |||||||||||||||||| |  | ||||||||  || ||||||||||||
Sbjct: 905 tatgctttagcatctattcaggaaattctgatggggaggctgattttgga 954
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>dbj|AK110978.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-C06, full
            insert sequence
          Length = 2033

 Score =  186 bits (94), Expect = 5e-44
 Identities = 196/230 (85%)
 Strand = Plus / Plus

                                                                        
Query: 278  atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
            |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 1048 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 1107

                                                                        
Query: 338  cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
            |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 1108 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 1167

                                                                        
Query: 398  acacagaggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtca 457
            |||| |||||| ||||||||||||| ||| ||||||| |||||||| |||||||| || |
Sbjct: 1168 acacggaggtggcaaatattgatgtcaaagaagagacgccagttggtcatggagaagtaa 1227

                                                              
Query: 458  catgctttagcatctattctgccagttctgatgctgaagctgattttgga 507
             |||||||||||||||||| |  | ||||||||  || ||||||||||||
Sbjct: 1228 tatgctttagcatctattcaggaaattctgatggggaggctgattttgga 1277
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>ref|XM_480334.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3777

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                        
Query: 278  atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
            |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 970  atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 1029

                                                                        
Query: 338  cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
            |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 1030 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 1089

                                                                        
Query: 398  acacagaggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtca 457
            |||| |||||| ||||||||||||| ||| |||||||||||||||| || ||||| || |
Sbjct: 1090 acacggaggtggcaaatattgatgtcaaagaagagacaccagttggtcacggagaagtaa 1149

                                                              
Query: 458  catgctttagcatctattctgccagttctgatgctgaagctgattttgga 507
             |||||||||||||| ||| |  | ||||||||  || ||||||||||||
Sbjct: 1150 tatgctttagcatctgttcaggaaattctgatggggaggctgattttgga 1199
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>dbj|AK103236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123F03, full
            insert sequence
          Length = 3777

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                        
Query: 278  atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
            |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 970  atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 1029

                                                                        
Query: 338  cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
            |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 1030 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 1089

                                                                        
Query: 398  acacagaggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtca 457
            |||| |||||| ||||||||||||| ||| |||||||||||||||| || ||||| || |
Sbjct: 1090 acacggaggtggcaaatattgatgtcaaagaagagacaccagttggtcacggagaagtaa 1149

                                                              
Query: 458  catgctttagcatctattctgccagttctgatgctgaagctgattttgga 507
             |||||||||||||| ||| |  | ||||||||  || ||||||||||||
Sbjct: 1150 tatgctttagcatctgttcaggaaattctgatggggaggctgattttgga 1199
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>dbj|AB047689.2| Oryza sativa mRNA for PolI-like DNA polymerase, complete cds
          Length = 3765

 Score =  178 bits (90), Expect = 1e-41
 Identities = 195/230 (84%)
 Strand = Plus / Plus

                                                                        
Query: 278  atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
            |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 954  atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 1013

                                                                        
Query: 338  cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
            |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 1014 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 1073

                                                                        
Query: 398  acacagaggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtca 457
            |||| |||||| ||||||||||||| ||| |||||||||||||||| || ||||| || |
Sbjct: 1074 acacggaggtggcaaatattgatgtcaaagaagagacaccagttggtcacggagaagtaa 1133

                                                              
Query: 458  catgctttagcatctattctgccagttctgatgctgaagctgattttgga 507
             |||||||||||||| ||| |  | ||||||||  || ||||||||||||
Sbjct: 1134 tatgctttagcatctgttcaggaaattctgatggggaggctgattttgga 1183
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>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13,
             complete sequence
          Length = 123480

 Score =  155 bits (78), Expect = 2e-34
 Identities = 201/242 (83%)
 Strand = Plus / Plus

                                                                         
Query: 166   cagtttgatgacttggctatagatggttataatggagctgagcatgaatgcacagccaag 225
             ||||||||||||   ||||  ||||||||| |||||| ||| ||||||||||||||||||
Sbjct: 68866 cagtttgatgacaaagctagggatggttatgatggagatgaacatgaatgcacagccaag 68925

                                                                         
Query: 226   acagcggtgcagcctcctccagctaaagcccccttgtctgaggaggctaaagatgcacgg 285
             |   | || ||   | |||||||||| || ||| ||||  ||||| ||||||||||  ||
Sbjct: 68926 aatacagtacaagattctccagctaaggcacccatgtccaaggagtctaaagatgcgagg 68985

                                                                         
Query: 286   aaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaatcagctagg 345
             ||||| ||||||||  | |||||||||||||||||||||||||  ||  | |||||||||
Sbjct: 68986 aaggcacttgctactgtgtacgacaaagttctggtggttgacaatgtgaagtcagctagg 69045

                                                                         
Query: 346   agcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtgacacagag 405
             || |||||||| || |||||  |||||||||| | |||||||||||||||||||||||||
Sbjct: 69046 agtgttgttcaattgcttacttcaaagtacaaaaactttattcatgcatgtgacacagag 69105

               
Query: 406   gt 407
             ||
Sbjct: 69106 gt 69107



 Score =  119 bits (60), Expect = 9e-24
 Identities = 87/96 (90%)
 Strand = Plus / Plus

                                                                         
Query: 412   aatattgatgttaaacaagagacaccagttggccatggagatgtcacatgctttagcatc 471
             |||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||
Sbjct: 69663 aatattgatgttaaacaagagacaccagttagccatggagaggtcatttgctttagcatc 69722

                                                 
Query: 472   tattctgccagttctgatgctgaagctgattttgga 507
             || |||| ||  |||||||| |||||||||||||||
Sbjct: 69723 tactctggcaactctgatgcagaagctgattttgga 69758
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  155 bits (78), Expect = 2e-34
 Identities = 201/242 (83%)
 Strand = Plus / Plus

                                                                            
Query: 166      cagtttgatgacttggctatagatggttataatggagctgagcatgaatgcacagccaag 225
                ||||||||||||   ||||  ||||||||| |||||| ||| ||||||||||||||||||
Sbjct: 32452065 cagtttgatgacaaagctagggatggttatgatggagatgaacatgaatgcacagccaag 32452124

                                                                            
Query: 226      acagcggtgcagcctcctccagctaaagcccccttgtctgaggaggctaaagatgcacgg 285
                |   | || ||   | |||||||||| || ||| ||||  ||||| ||||||||||  ||
Sbjct: 32452125 aatacagtacaagattctccagctaaggcacccatgtccaaggagtctaaagatgcgagg 32452184

                                                                            
Query: 286      aaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaatcagctagg 345
                ||||| ||||||||  | |||||||||||||||||||||||||  ||  | |||||||||
Sbjct: 32452185 aaggcacttgctactgtgtacgacaaagttctggtggttgacaatgtgaagtcagctagg 32452244

                                                                            
Query: 346      agcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtgacacagag 405
                || |||||||| || |||||  |||||||||| | |||||||||||||||||||||||||
Sbjct: 32452245 agtgttgttcaattgcttacttcaaagtacaaaaactttattcatgcatgtgacacagag 32452304

                  
Query: 406      gt 407
                ||
Sbjct: 32452305 gt 32452306



 Score =  119 bits (60), Expect = 9e-24
 Identities = 87/96 (90%)
 Strand = Plus / Plus

                                                                            
Query: 412      aatattgatgttaaacaagagacaccagttggccatggagatgtcacatgctttagcatc 471
                |||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||
Sbjct: 32452862 aatattgatgttaaacaagagacaccagttagccatggagaggtcatttgctttagcatc 32452921

                                                    
Query: 472      tattctgccagttctgatgctgaagctgattttgga 507
                || |||| ||  |||||||| |||||||||||||||
Sbjct: 32452922 tactctggcaactctgatgcagaagctgattttgga 32452957
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  107 bits (54), Expect = 4e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                           
Query: 278     atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
               |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 4409392 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 4409333

                                                                           
Query: 338     cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
               |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 4409332 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 4409273

                         
Query: 398     acacagaggt 407
               |||| |||||
Sbjct: 4409272 acacggaggt 4409263



 Score =  107 bits (54), Expect = 4e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                           
Query: 278     atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
               |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 4392817 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 4392758

                                                                           
Query: 338     cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
               |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 4392757 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 4392698

                         
Query: 398     acacagaggt 407
               |||| |||||
Sbjct: 4392697 acacggaggt 4392688



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                           
Query: 404     aggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtcacatgct 463
               ||||| ||||||||||||| ||| ||||||| |||||||| |||||||| || | |||||
Sbjct: 4408849 aggtggcaaatattgatgtcaaagaagagacgccagttggtcatggagaagtaatatgct 4408790

                                                           
Query: 464     ttagcatctattctgccagttctgatgctgaagctgattttgga 507
               ||||||||||||| |  | ||||||||  || ||||||||||||
Sbjct: 4408789 ttagcatctattcaggaaattctgatggggaggctgattttgga 4408746



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                           
Query: 404     aggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtcacatgct 463
               ||||| ||||||||||||| ||| |||||||||||||||| || ||||| || | |||||
Sbjct: 4392273 aggtggcaaatattgatgtcaaagaagagacaccagttggtcacggagaagtaatatgct 4392214

                                                           
Query: 464     ttagcatctattctgccagttctgatgctgaagctgattttgga 507
               ||||||||| ||| |  | ||||||||  || ||||||||||||
Sbjct: 4392213 ttagcatctgttcaggaaattctgatggggaggctgattttgga 4392170
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>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0054L03
          Length = 183623

 Score =  107 bits (54), Expect = 4e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                          
Query: 278    atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
              |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 172186 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 172127

                                                                          
Query: 338    cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
              |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 172126 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 172067

                        
Query: 398    acacagaggt 407
              |||| |||||
Sbjct: 172066 acacggaggt 172057



 Score =  107 bits (54), Expect = 4e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                          
Query: 278    atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
              |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 155611 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 155552

                                                                          
Query: 338    cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
              |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 155551 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 155492

                        
Query: 398    acacagaggt 407
              |||| |||||
Sbjct: 155491 acacggaggt 155482



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                          
Query: 404    aggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtcacatgct 463
              ||||| ||||||||||||| ||| ||||||| |||||||| |||||||| || | |||||
Sbjct: 171643 aggtggcaaatattgatgtcaaagaagagacgccagttggtcatggagaagtaatatgct 171584

                                                          
Query: 464    ttagcatctattctgccagttctgatgctgaagctgattttgga 507
              ||||||||||||| |  | ||||||||  || ||||||||||||
Sbjct: 171583 ttagcatctattcaggaaattctgatggggaggctgattttgga 171540



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                          
Query: 404    aggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtcacatgct 463
              ||||| ||||||||||||| ||| |||||||||||||||| || ||||| || | |||||
Sbjct: 155067 aggtggcaaatattgatgtcaaagaagagacaccagttggtcacggagaagtaatatgct 155008

                                                          
Query: 464    ttagcatctattctgccagttctgatgctgaagctgattttgga 507
              ||||||||| ||| |  | ||||||||  || ||||||||||||
Sbjct: 155007 ttagcatctgttcaggaaattctgatggggaggctgattttgga 154964
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>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1134_B10
          Length = 115074

 Score =  107 bits (54), Expect = 4e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                         
Query: 278   atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
             |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 56568 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 56509

                                                                         
Query: 338   cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
             |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 56508 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 56449

                       
Query: 398   acacagaggt 407
             |||| |||||
Sbjct: 56448 acacggaggt 56439



 Score =  107 bits (54), Expect = 4e-20
 Identities = 111/130 (85%)
 Strand = Plus / Minus

                                                                         
Query: 278   atgcacggaaggctcttgctaccatctacgacaaagttctggtggttgacacggtcgaat 337
             |||||||||||   |||||||||||||| ||||||||| |||| || ||||  || || |
Sbjct: 39993 atgcacggaagttgcttgctaccatctatgacaaagttttggttgtcgacaatgttgagt 39934

                                                                         
Query: 338   cagctaggagcgttgttcagttacttaccacaaagtacaagagctttattcatgcatgtg 397
             |||||||||| |||||| | || ||||| |||||||||||  ||||||||||||||||||
Sbjct: 39933 cagctaggagtgttgttaaattgcttactacaaagtacaaaggctttattcatgcatgtg 39874

                       
Query: 398   acacagaggt 407
             |||| |||||
Sbjct: 39873 acacggaggt 39864



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                         
Query: 404   aggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtcacatgct 463
             ||||| ||||||||||||| ||| ||||||| |||||||| |||||||| || | |||||
Sbjct: 56025 aggtggcaaatattgatgtcaaagaagagacgccagttggtcatggagaagtaatatgct 55966

                                                         
Query: 464   ttagcatctattctgccagttctgatgctgaagctgattttgga 507
             ||||||||||||| |  | ||||||||  || ||||||||||||
Sbjct: 55965 ttagcatctattcaggaaattctgatggggaggctgattttgga 55922



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                         
Query: 404   aggtgtcaaatattgatgttaaacaagagacaccagttggccatggagatgtcacatgct 463
             ||||| ||||||||||||| ||| |||||||||||||||| || ||||| || | |||||
Sbjct: 39449 aggtggcaaatattgatgtcaaagaagagacaccagttggtcacggagaagtaatatgct 39390

                                                         
Query: 464   ttagcatctattctgccagttctgatgctgaagctgattttgga 507
             ||||||||| ||| |  | ||||||||  || ||||||||||||
Sbjct: 39389 ttagcatctgttcaggaaattctgatggggaggctgattttgga 39346
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>emb|CR937053.2|RN476F3 Rattus norvegicus chromosome 1 BAC CH230-476F3, complete sequence
          Length = 139452

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 478  gccagttctgatgctgaagctgatttt 504
            ||||||||||| |||||||||||||||
Sbjct: 9073 gccagttctgaggctgaagctgatttt 9047
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>emb|BX470195.10| Mouse DNA sequence from clone RP23-4K22 on chromosome X, complete
             sequence
          Length = 213684

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 389   atgcatgtgacacagaggtgtca 411
             |||||||||||||||||||||||
Sbjct: 56936 atgcatgtgacacagaggtgtca 56914
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>gb|AC010744.7| Homo sapiens BAC clone RP11-548D17 from 2, complete sequence
          Length = 186687

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 200   gagctgagcatgaatgcacagc 221
             ||||||||||||||||||||||
Sbjct: 81990 gagctgagcatgaatgcacagc 82011
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>gb|AC093761.3| Homo sapiens BAC clone RP11-89I4 from 4, complete sequence
          Length = 155154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   ctcttctaaatactggtaaag 124
             |||||||||||||||||||||
Sbjct: 60580 ctcttctaaatactggtaaag 60600
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>gb|AC101794.5| Mus musculus chromosome 1, clone RP24-188N24, complete sequence
          Length = 136946

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   tgatgctgaagctgattttg 505
             ||||||||||||||||||||
Sbjct: 53378 tgatgctgaagctgattttg 53359
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 26      atgacatcaaactgccaaac 45
               ||||||||||||||||||||
Sbjct: 1233519 atgacatcaaactgccaaac 1233500
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>gb|AC109153.13| Mus musculus chromosome 15, clone RP23-51J23, complete sequence
          Length = 222164

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 27    tgacatcaaactgccaaacaggccaagt 54
             ||||||||||||||||| ||| ||||||
Sbjct: 71789 tgacatcaaactgccaatcagcccaagt 71762
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>gb|AC131941.1| Mus musculus BAC clone RP23-109A19 from 1, complete sequence
          Length = 171274

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 486    tgatgctgaagctgattttg 505
              ||||||||||||||||||||
Sbjct: 106759 tgatgctgaagctgattttg 106740
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>emb|AL161723.12| Human DNA sequence from clone RP13-172P13 on chromosome X, complete
             sequence
          Length = 155725

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aggtagagatgcattggcct 81
             ||||||||||||||||||||
Sbjct: 75224 aggtagagatgcattggcct 75243
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>ref|XM_777562.1| PREDICTED: Strongylocentrotus purpuratus similar to chromodomain
            helicase DNA binding protein 8 (LOC577327), mRNA
          Length = 5787

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  ctggtggttgacacggtcga 335
            ||||||||||||||||||||
Sbjct: 1709 ctggtggttgacacggtcga 1690
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>gb|S74562.1| gag=Gag...pol [human T-lymphotropic virus type 1 HTLV-1, Zairian
            isolate, HTLV-1EL, Genomic, 3 genes, 5186 nt]
          Length = 5186

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  tagcatctattctgccagtt 484
            ||||||||||||||||||||
Sbjct: 2135 tagcatctattctgccagtt 2154
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>gb|AC016580.7|AC016580 Homo sapiens chromosome 5 clone CTD-2509J24, complete sequence
          Length = 184118

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   ctaaatactggtaaagtcaa 128
             ||||||||||||||||||||
Sbjct: 71563 ctaaatactggtaaagtcaa 71582
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>tpg|BK000520.1| TPA: TPA_exp: Mus musculus matriptase 2 gene, complete cds
          Length = 31888

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   ggaaggctcttgctaccatc 303
             ||||||||||||||||||||
Sbjct: 13840 ggaaggctcttgctaccatc 13859
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>gb|AC034246.4|AC034246 Homo sapiens chromosome 5 clone RP11-160F8, complete sequence
          Length = 155025

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    ctaaatactggtaaagtcaa 128
              ||||||||||||||||||||
Sbjct: 125356 ctaaatactggtaaagtcaa 125375
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 26      atgacatcaaactgccaaac 45
               ||||||||||||||||||||
Sbjct: 3519120 atgacatcaaactgccaaac 3519139
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>gb|AC008960.6|AC008960 Homo sapiens chromosome 5 clone CTD-2354D24, complete sequence
          Length = 74999

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctaaatactggtaaagtcaa 128
             ||||||||||||||||||||
Sbjct: 37588 ctaaatactggtaaagtcaa 37569
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>emb|BX072583.7| Zebrafish DNA sequence from clone CH211-185M2 in linkage group 13,
             complete sequence
          Length = 154297

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 483   ttctgatgctgaagctgattttgg 506
             ||||||||||||||||| ||||||
Sbjct: 48408 ttctgatgctgaagctggttttgg 48431
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>emb|BX682529.6| Zebrafish DNA sequence from clone CH211-194P13 in linkage group 19,
              complete sequence
          Length = 176981

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    atgcacggaaggctcttgct 297
              ||||||||||||||||||||
Sbjct: 140863 atgcacggaaggctcttgct 140882
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>emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 in linkage group 20,
             complete sequence
          Length = 201942

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   gtctgaggaggctaaagatg 280
             ||||||||||||||||||||
Sbjct: 91493 gtctgaggaggctaaagatg 91512
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>emb|AL590144.10| Mouse DNA sequence from clone RP23-79F10 on chromosome 15, complete
              sequence
          Length = 166677

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 284    ggaaggctcttgctaccatc 303
              ||||||||||||||||||||
Sbjct: 120394 ggaaggctcttgctaccatc 120413
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>gb|AC160528.9| Mus musculus chromosome 15, clone RP23-310L8, complete sequence
          Length = 174502

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 27    tgacatcaaactgccaaacaggccaagt 54
             ||||||||||||||||| ||| ||||||
Sbjct: 10705 tgacatcaaactgccaatcagcccaagt 10732


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,487,673
Number of Sequences: 3902068
Number of extensions: 4487673
Number of successful extensions: 86687
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86519
Number of HSP's gapped (non-prelim): 165
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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